FFCP PHASE1:Mm9::chr1:137268883..137268909,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=176|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:137268883..137268909,-|id=chr1:137268883..137268909,-|ontology_enrichment_celltype=CL:0000055!5.97e-09!50;CL:0002319!3.97e-08!43;CL:0000221!1.28e-07!44;CL:0000133!1.28e-07!44;CL:0002453!5.18e-07!8|ontology_enrichment_celltype_v019_2=CL:0002453,2.56e-21,8;CL:0000333,9.00e-17,10;CL:0000095,9.00e-17,10;CL:0000243,9.00e-17,10;CL:0000123,9.00e-17,10;CL:0000125,9.00e-17,10;CL:0000030,9.00e-17,10;CL:0000339,9.00e-17,10;CL:0000128,7.30e-16,6;CL:0000126,7.30e-16,6;CL:0000127,7.30e-16,6;CL:0000192,2.01e-09,3;CL:0000359,2.01e-09,3;CL:0002539,2.01e-09,3;CL:0000514,2.01e-09,3;CL:0000878,4.56e-07,2;CL:0000129,4.56e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.72e-11!102;UBERON:0000924!3.72e-11!102;UBERON:0006601!3.72e-11!102;UBERON:0000073!1.14e-10!75;UBERON:0001016!1.14e-10!75;UBERON:0001017!1.39e-10!73;UBERON:0005743!1.39e-10!73;UBERON:0002346!4.75e-08!71;UBERON:0003075!4.75e-08!71;UBERON:0007284!4.75e-08!71|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.01e-09,3;UBERON:0004237,2.01e-09,3;UBERON:0004695,2.01e-09,3;UBERON:0002111,2.01e-09,3;UBERON:0004178,2.01e-09,3;UBERON:0004733,3.30e-07,6;UBERON:0004732,3.30e-07,6;UBERON:0002028,3.30e-07,6;UBERON:0007277,3.30e-07,6;UBERON:0000947,3.83e-07,4;UBERON:0001637,3.83e-07,4;UBERON:0004573,3.83e-07,4;UBERON:0003509,3.83e-07,4;UBERON:0004571,3.83e-07,4;UBERON:0010191,3.83e-07,4;UBERON:0004572,3.83e-07,4;UBERON:0002037,9.49e-07,4;UBERON:0002680,9.49e-07,4;UBERON:0001895,9.49e-07,4;UBERON:0010092,9.49e-07,4;UBERON:0006215,9.49e-07,4|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91715044485213,4.46058497365864,5.13930906052708,2.34717403304412,1.74420125104357,3.07560655828261,4.08302788055995,1.39986421625363,2.87505128729943,0,0,0,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0.633831403506179,0.677689064138264,2.66788438833342,0.449949858640699,0,0,9.28760342607055,14.9845139075406,0.103689612308478,0.135005938331691,0.420649922702764,0.285650984403804,0.883474163806454,0.122490799214954,0.191690942036473,0.919218786610021,2.20231761998777,0.255374676170375,0,0.659431438650969,0.274462930807229,0,0.558365998002762,0,0.763991238884051,0.589257170947335,0.854230084794618,0.186399445825301,0.151452386666368,0.302286240427142,0.289864488701678,0,0,0,0,0,0.280888840263504,0.340860645156116,0,0.35333957451034,0,1.28326477414318,2.54805239706646,0,1.08245520505607,0.253359865475099,0.505524445014783,0.34255163915718,0,0.148442139064825,1.04091196059682,0.608930956624282,0.461230994512117,0.301445281105245,0.117588707135705,0,0.741584903203122,0.144599356919912,0.884610551949874,0.808834249737046,1.32504911076236,0.969750506270444,0,0,7.12118803165747,0,0,0,0,0.449371918214468,0,0.628271760564322,0,1.27857728665165,0.20778804455956,0.324482526135515,0.101839363850316,0.497627882440372,0,0,0.650602214813519,0,0.180062129805349,0.150704817835715,0.136072998302656,0.384341160854549,0.749613796477831,0.776110112217047,0,0.189106080167819,0.351902248327898,0.43839146485515,0,0,0,1.19420560091096,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0.146199987425332,0,0,0.630869845692382,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,1.79763881730844,0,0,0.758671603812327,0.114248512609729,0,0,0.581857461502877,0.0701358198903186,0.316182685621286,0.147610147979602,0.470996183524124,0.123397163921801,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0.324270453550071,0.274561413188081,1.43768206527355,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0,0.234690248288502,0,0.238043640886014,0,0.315270288212382,0.664394068946325,0.159454768657487,0,0.345369963731791,0,0,0,0,0.275936746304732,0.160550589987792,1.17211686592203,0.819674726883377,3.28212205365685,0.631016438832513,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,0.876767573733936,0.790575555893047,0.321321316421807,0,0.712262414669021,0.488660878060728,0.329940245945071,0,0.242780636154981,0.906970670894253,0,0.295301892880773,0,0,0,0.356497378384721,0,1.05418608574999,0,0,0.540183282093931,0.776152102696527,0.214337035031592,0,0.178368817602071,0.493647061806363,0.304464949114599,0.23467170806371,0.21183207086382,0,0.16488625294148,0.807322133479528,0.180938774784468,0,0,0.291480836629851,0.741701208042039,0.341741761595705,0.412773735926445,0.185194527369712,0,0.136694227721025,0,0,0,0,0.954670618015114,0.790839983952838,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0.621339313086926,0,0.299033092087958,0.496375471371293,0,0.258319646955462,0.337912250981556,0.352071715937262,0.2604087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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=176 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:137268883..137268909,- | |||
|id=chr1:137268883..137268909,- | |||
|ontology_enrichment_celltype=CL:0000055!5.97e-09!50;CL:0002319!3.97e-08!43;CL:0000221!1.28e-07!44;CL:0000133!1.28e-07!44;CL:0002453!5.18e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.56e-21,8;CL:0000333,9.00e-17,10;CL:0000095,9.00e-17,10;CL:0000243,9.00e-17,10;CL:0000123,9.00e-17,10;CL:0000125,9.00e-17,10;CL:0000030,9.00e-17,10;CL:0000339,9.00e-17,10;CL:0000128,7.30e-16,6;CL:0000126,7.30e-16,6;CL:0000127,7.30e-16,6;CL:0000192,2.01e-09,3;CL:0000359,2.01e-09,3;CL:0002539,2.01e-09,3;CL:0000514,2.01e-09,3;CL:0000878,4.56e-07,2;CL:0000129,4.56e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.72e-11!102;UBERON:0000924!3.72e-11!102;UBERON:0006601!3.72e-11!102;UBERON:0000073!1.14e-10!75;UBERON:0001016!1.14e-10!75;UBERON:0001017!1.39e-10!73;UBERON:0005743!1.39e-10!73;UBERON:0002346!4.75e-08!71;UBERON:0003075!4.75e-08!71;UBERON:0007284!4.75e-08!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.01e-09,3;UBERON:0004237,2.01e-09,3;UBERON:0004695,2.01e-09,3;UBERON:0002111,2.01e-09,3;UBERON:0004178,2.01e-09,3;UBERON:0004733,3.30e-07,6;UBERON:0004732,3.30e-07,6;UBERON:0002028,3.30e-07,6;UBERON:0007277,3.30e-07,6;UBERON:0000947,3.83e-07,4;UBERON:0001637,3.83e-07,4;UBERON:0004573,3.83e-07,4;UBERON:0003509,3.83e-07,4;UBERON:0004571,3.83e-07,4;UBERON:0010191,3.83e-07,4;UBERON:0004572,3.83e-07,4;UBERON:0002037,9.49e-07,4;UBERON:0002680,9.49e-07,4;UBERON:0001895,9.49e-07,4;UBERON:0010092,9.49e-07,4;UBERON:0006215,9.49e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91715044485213,4.46058497365864,5.13930906052708,2.34717403304412,1.74420125104357,3.07560655828261,4.08302788055995,1.39986421625363,2.87505128729943,0,0,0,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0.633831403506179,0.677689064138264,2.66788438833342,0.449949858640699,0,0,9.28760342607055,14.9845139075406,0.103689612308478,0.135005938331691,0.420649922702764,0.285650984403804,0.883474163806454,0.122490799214954,0.191690942036473,0.919218786610021,2.20231761998777,0.255374676170375,0,0.659431438650969,0.274462930807229,0,0.558365998002762,0,0.763991238884051,0.589257170947335,0.854230084794618,0.186399445825301,0.151452386666368,0.302286240427142,0.289864488701678,0,0,0,0,0,0.280888840263504,0.340860645156116,0,0.35333957451034,0,1.28326477414318,2.54805239706646,0,1.08245520505607,0.253359865475099,0.505524445014783,0.34255163915718,0,0.148442139064825,1.04091196059682,0.608930956624282,0.461230994512117,0.301445281105245,0.117588707135705,0,0.741584903203122,0.144599356919912,0.884610551949874,0.808834249737046,1.32504911076236,0.969750506270444,0,0,7.12118803165747,0,0,0,0,0.449371918214468,0,0.628271760564322,0,1.27857728665165,0.20778804455956,0.324482526135515,0.101839363850316,0.497627882440372,0,0,0.650602214813519,0,0.180062129805349,0.150704817835715,0.136072998302656,0.384341160854549,0.749613796477831,0.776110112217047,0,0.189106080167819,0.351902248327898,0.43839146485515,0,0,0,1.19420560091096,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0.146199987425332,0,0,0.630869845692382,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,1.79763881730844,0,0,0.758671603812327,0.114248512609729,0,0,0.581857461502877,0.0701358198903186,0.316182685621286,0.147610147979602,0.470996183524124,0.123397163921801,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0.324270453550071,0.274561413188081,1.43768206527355,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0,0.234690248288502,0,0.238043640886014,0,0.315270288212382,0.664394068946325,0.159454768657487,0,0.345369963731791,0,0,0,0,0.275936746304732,0.160550589987792,1.17211686592203,0.819674726883377,3.28212205365685,0.631016438832513,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,0.876767573733936,0.790575555893047,0.321321316421807,0,0.712262414669021,0.488660878060728,0.329940245945071,0,0.242780636154981,0.906970670894253,0,0.295301892880773,0,0,0,0.356497378384721,0,1.05418608574999,0,0,0.540183282093931,0.776152102696527,0.214337035031592,0,0.178368817602071,0.493647061806363,0.304464949114599,0.23467170806371,0.21183207086382,0,0.16488625294148,0.807322133479528,0.180938774784468,0,0,0.291480836629851,0.741701208042039,0.341741761595705,0.412773735926445,0.185194527369712,0,0.136694227721025,0,0,0,0,0.954670618015114,0.790839983952838,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0.621339313086926,0,0.299033092087958,0.496375471371293,0,0.258319646955462,0.337912250981556,0.352071715937262,0.2604087696879,0.419437377702843,0,0.288030006257865,0,0,0.308132871494482,0.129920822977795,0.179026695667481,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.194915761479505,0,0,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0,0.643105137237198,7.52358156053045,1.6942555278512,0,0.572895513439397,0.68741272937475,0,0,2.02506750069542,1.35096360967266,0.453142408984205,0.51776031175182,0,1.19707462020309,0.170733605754134,0,0,0,0,0.206035057238894,0,0.505394423527595,0,0,0.187283014939765,0.0640251524048693,0,0.476293691283074,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0.436039249896986,0.188218760830661,0.169229215783353,0.182927972872773,0.526139422875686,0,0,0.237270036248348,0,0,0,0.192906610981141,1.24905288968973,0.467863216890817,2.14871054048298,1.72159498861959,1.76473135295612,0.927471342481686 | |||
|short_description=p@chr1:137268883..137268909,- | |||
}} |
Revision as of 19:00, 13 September 2013
Short description: | p@chr1:137268883..137268909, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:137268883..137268909, - |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 2.56e-21 | 8 |
migratory neural crest cell | 9.00e-17 | 10 |
neuron associated cell | 9.00e-17 | 10 |
glial cell (sensu Vertebrata) | 9.00e-17 | 10 |
neuron associated cell (sensu Vertebrata) | 9.00e-17 | 10 |
glial cell | 9.00e-17 | 10 |
glioblast | 9.00e-17 | 10 |
glioblast (sensu Vertebrata) | 9.00e-17 | 10 |
oligodendrocyte | 7.30e-16 | 6 |
macroglial cell | 7.30e-16 | 6 |
astrocyte | 7.30e-16 | 6 |
smooth muscle cell | 2.01e-09 | 3 |
vascular associated smooth muscle cell | 2.01e-09 | 3 |
aortic smooth muscle cell | 2.01e-09 | 3 |
smooth muscle myoblast | 2.01e-09 | 3 |
central nervous system macrophage | 4.56e-07 | 2 |
microglial cell | 4.56e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 2.01e-09 | 3 |
blood vessel smooth muscle | 2.01e-09 | 3 |
arterial system smooth muscle | 2.01e-09 | 3 |
artery smooth muscle tissue | 2.01e-09 | 3 |
aorta smooth muscle tissue | 2.01e-09 | 3 |
segmental subdivision of hindbrain | 3.30e-07 | 6 |
segmental subdivision of nervous system | 3.30e-07 | 6 |
hindbrain | 3.30e-07 | 6 |
presumptive hindbrain | 3.30e-07 | 6 |
aorta | 3.83e-07 | 4 |
artery | 3.83e-07 | 4 |
systemic artery | 3.83e-07 | 4 |
arterial blood vessel | 3.83e-07 | 4 |
systemic arterial system | 3.83e-07 | 4 |
aortic system | 3.83e-07 | 4 |
arterial system | 3.83e-07 | 4 |
cerebellum | 9.49e-07 | 4 |
regional part of metencephalon | 9.49e-07 | 4 |
metencephalon | 9.49e-07 | 4 |
future metencephalon | 9.49e-07 | 4 |
rhombic lip | 9.49e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.