FFCP PHASE1:Mm9::chr11:109223375..109223389,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=210|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:109223375..109223389,+|id=chr11:109223375..109223389,+|ontology_enrichment_celltype=CL:0000988!5.96e-21!32;CL:0002032!5.96e-21!32;CL:0000037!5.96e-21!32;CL:0000566!5.96e-21!32;CL:0000837!5.96e-21!32;CL:0000219!1.92e-17!54;CL:0002320!2.55e-16!46;CL:0000134!2.55e-16!46;CL:0000838!1.13e-14!12;CL:0000063!1.70e-14!66;CL:0000144!2.22e-14!121;CL:0000012!2.22e-14!121;CL:0000542!2.25e-13!13;CL:0000051!2.25e-13!13;CL:0000084!6.15e-13!11;CL:0000827!6.15e-13!11;CL:0000034!1.00e-12!97;CL:0002031!2.56e-12!25;CL:0000738!7.95e-12!17;CL:0002087!7.95e-12!17;CL:0002371!1.88e-11!118;CL:0000548!5.75e-11!115;CL:0000004!5.75e-11!115;CL:0000255!5.75e-11!115;CL:0000791!2.96e-10!9;CL:0000789!2.96e-10!9;CL:0002420!2.96e-10!9;CL:0002419!2.96e-10!9;CL:0000790!2.96e-10!9;CL:0000723!1.77e-09!91;CL:0000048!1.77e-09!91;CL:0000049!2.63e-09!19;CL:0000624!1.16e-08!8|ontology_enrichment_celltype_v019_2=CL:0000988,2.50e-18,32;CL:0002032,2.50e-18,32;CL:0000037,2.50e-18,32;CL:0000837,2.50e-18,32;CL:0000049,1.19e-15,19;CL:0002320,2.88e-15,46;CL:0000134,2.88e-15,46;CL:0000219,7.93e-13,54;CL:0000034,2.05e-11,97;CL:0000557,1.38e-08,7;CL:0000213,4.65e-08,1;CL:0002078,4.65e-08,1;CL:0000115,4.65e-08,1;CL:0002262,4.65e-08,1;CL:1000398,4.65e-08,1;CL:0000815,2.05e-07,1;CL:0000792,2.05e-07,1;CL:0000945,3.16e-07,1;CL:0000236,3.16e-07,1;CL:0000826,3.16e-07,1;CL:0000723,4.40e-07,91;CL:0000048,4.40e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.55e-16!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.88e-15,46;UBERON:0002394,4.65e-08,1;UBERON:0001281,4.65e-08,1;UBERON:0000353,4.65e-08,1;UBERON:0003497,4.65e-08,1;UBERON:0003909,4.65e-08,1;UBERON:0003928,4.65e-08,1;UBERON:0003835,4.65e-08,1;UBERON:0003513,4.65e-08,1;UBERON:0001280,4.65e-08,1;UBERON:0004647,4.65e-08,1;UBERON:0002294,4.65e-08,1;UBERON:0001173,4.65e-08,1;UBERON:0004912,4.65e-08,1;UBERON:0005171,4.65e-08,1|phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0,0,2.06597317506522,0.140788722151667,0.936258105287974,0,0,0.856003649656029,0.611942816932982,0,0.202475267389826,0,0.788655413395594,0,0,0,0.0992909512008853,0.261199789138935,0.319984845586813,0,0,0,0.430942465371778,0,0,0,0,1.84519436275371,0,0,0,0.204169356262369,0,0,0.523523743973798,0,0,0,0,0.101376931219515,0,0.782391344348039,0,0.219686182734472,0,0,0,1.67782606057736,2.17608642603403,0.672187598284928,0.257259436035947,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,12.1743085254705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.07371423320129,5.99902730993408,3.04968544975355,0.299581278809645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21327912387941,2.83082697826187,1.70498099637356,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,7.30907248973578,6.9975726161829,4.56059913554598,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr11:109223375..109223389,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=210 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:109223375..109223389,+ | |||
|id=chr11:109223375..109223389,+ | |||
|ontology_enrichment_celltype=CL:0000988!5.96e-21!32;CL:0002032!5.96e-21!32;CL:0000037!5.96e-21!32;CL:0000566!5.96e-21!32;CL:0000837!5.96e-21!32;CL:0000219!1.92e-17!54;CL:0002320!2.55e-16!46;CL:0000134!2.55e-16!46;CL:0000838!1.13e-14!12;CL:0000063!1.70e-14!66;CL:0000144!2.22e-14!121;CL:0000012!2.22e-14!121;CL:0000542!2.25e-13!13;CL:0000051!2.25e-13!13;CL:0000084!6.15e-13!11;CL:0000827!6.15e-13!11;CL:0000034!1.00e-12!97;CL:0002031!2.56e-12!25;CL:0000738!7.95e-12!17;CL:0002087!7.95e-12!17;CL:0002371!1.88e-11!118;CL:0000548!5.75e-11!115;CL:0000004!5.75e-11!115;CL:0000255!5.75e-11!115;CL:0000791!2.96e-10!9;CL:0000789!2.96e-10!9;CL:0002420!2.96e-10!9;CL:0002419!2.96e-10!9;CL:0000790!2.96e-10!9;CL:0000723!1.77e-09!91;CL:0000048!1.77e-09!91;CL:0000049!2.63e-09!19;CL:0000624!1.16e-08!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.50e-18,32;CL:0002032,2.50e-18,32;CL:0000037,2.50e-18,32;CL:0000837,2.50e-18,32;CL:0000049,1.19e-15,19;CL:0002320,2.88e-15,46;CL:0000134,2.88e-15,46;CL:0000219,7.93e-13,54;CL:0000034,2.05e-11,97;CL:0000557,1.38e-08,7;CL:0000213,4.65e-08,1;CL:0002078,4.65e-08,1;CL:0000115,4.65e-08,1;CL:0002262,4.65e-08,1;CL:1000398,4.65e-08,1;CL:0000815,2.05e-07,1;CL:0000792,2.05e-07,1;CL:0000945,3.16e-07,1;CL:0000236,3.16e-07,1;CL:0000826,3.16e-07,1;CL:0000723,4.40e-07,91;CL:0000048,4.40e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.55e-16!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.88e-15,46;UBERON:0002394,4.65e-08,1;UBERON:0001281,4.65e-08,1;UBERON:0000353,4.65e-08,1;UBERON:0003497,4.65e-08,1;UBERON:0003909,4.65e-08,1;UBERON:0003928,4.65e-08,1;UBERON:0003835,4.65e-08,1;UBERON:0003513,4.65e-08,1;UBERON:0001280,4.65e-08,1;UBERON:0004647,4.65e-08,1;UBERON:0002294,4.65e-08,1;UBERON:0001173,4.65e-08,1;UBERON:0004912,4.65e-08,1;UBERON:0005171,4.65e-08,1 | |||
|phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0,0,2.06597317506522,0.140788722151667,0.936258105287974,0,0,0.856003649656029,0.611942816932982,0,0.202475267389826,0,0.788655413395594,0,0,0,0.0992909512008853,0.261199789138935,0.319984845586813,0,0,0,0.430942465371778,0,0,0,0,1.84519436275371,0,0,0,0.204169356262369,0,0,0.523523743973798,0,0,0,0,0.101376931219515,0,0.782391344348039,0,0.219686182734472,0,0,0,1.67782606057736,2.17608642603403,0.672187598284928,0.257259436035947,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,12.1743085254705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.07371423320129,5.99902730993408,3.04968544975355,0.299581278809645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21327912387941,2.83082697826187,1.70498099637356,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,7.30907248973578,6.9975726161829,4.56059913554598,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr11:109223375..109223389,+ | |||
}} |
Revision as of 18:37, 12 September 2013
Short description: | p@chr11:109223375..109223389, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:109223375..109223389, + |
Coexpression cluster: | MCL_coexpression_mm9:210 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.50e-18 | 32 |
hematopoietic oligopotent progenitor cell | 2.50e-18 | 32 |
hematopoietic stem cell | 2.50e-18 | 32 |
hematopoietic multipotent progenitor cell | 2.50e-18 | 32 |
common myeloid progenitor | 1.19e-15 | 19 |
connective tissue cell | 2.88e-15 | 46 |
mesenchymal cell | 2.88e-15 | 46 |
motile cell | 7.93e-13 | 54 |
stem cell | 2.05e-11 | 97 |
granulocyte monocyte progenitor cell | 1.38e-08 | 7 |
lining cell | 4.65e-08 | 1 |
meso-epithelial cell | 4.65e-08 | 1 |
endothelial cell | 4.65e-08 | 1 |
endothelial cell of sinusoid | 4.65e-08 | 1 |
endothelial cell of hepatic sinusoid | 4.65e-08 | 1 |
regulatory T cell | 2.05e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.05e-07 | 1 |
lymphocyte of B lineage | 3.16e-07 | 1 |
B cell | 3.16e-07 | 1 |
pro-B cell | 3.16e-07 | 1 |
somatic stem cell | 4.40e-07 | 91 |
multi fate stem cell | 4.40e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.88e-15 | 46 |
bile duct | 4.65e-08 | 1 |
hepatic sinusoid | 4.65e-08 | 1 |
parenchyma | 4.65e-08 | 1 |
abdomen blood vessel | 4.65e-08 | 1 |
sinusoid | 4.65e-08 | 1 |
digestive system duct | 4.65e-08 | 1 |
abdominal segment blood vessel | 4.65e-08 | 1 |
trunk blood vessel | 4.65e-08 | 1 |
liver parenchyma | 4.65e-08 | 1 |
liver lobule | 4.65e-08 | 1 |
biliary system | 4.65e-08 | 1 |
biliary tree | 4.65e-08 | 1 |
biliary bud | 4.65e-08 | 1 |
hepatic duct | 4.65e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.