FFCP PHASE1:Mm9::chr17:35834647..35834695,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12305|HGNC=|UniProt=B0V2H9|association_with_transcript=220bp_to_ENSMUST00000146472_5end|description=CAGE_peak_6_at_Ddr1_5end|id=chr17:35834647..35834695,-|ontology_enrichment_celltype=CL:0000055!8.18e-15!50;CL:0002319!2.76e-14!43;CL:0000221!2.05e-13!44;CL:0000133!2.05e-13!44;CL:0000393!5.49e-10!39;CL:0000211!5.49e-10!39;CL:0002321!8.20e-10!70;CL:0000220!8.20e-10!70;CL:0000540!1.12e-08!33;CL:0000047!1.12e-08!33;CL:0000031!1.12e-08!33;CL:0000404!1.12e-08!33;CL:0000333!2.21e-07!10;CL:0000095!2.21e-07!10;CL:0000243!2.21e-07!10;CL:0000123!2.21e-07!10;CL:0000125!2.21e-07!10;CL:0000030!2.21e-07!10;CL:0000339!2.21e-07!10;CL:0002453!8.01e-07!8;CL:0000107!9.47e-07!9|ontology_enrichment_celltype_v019_2=CL:0002319,3.67e-15,43;CL:0000221,1.44e-14,44;CL:0000133,1.44e-14,44;CL:0002321,4.08e-12,70;CL:0000333,1.55e-10,10;CL:0000095,1.55e-10,10;CL:0000243,1.55e-10,10;CL:0000123,1.55e-10,10;CL:0000125,1.55e-10,10;CL:0000030,1.55e-10,10;CL:0000339,1.55e-10,10;CL:0002453,1.12e-09,8;CL:0000107,1.45e-09,9;CL:0000393,5.37e-09,39;CL:0000211,5.37e-09,39;CL:0000540,1.12e-07,33;CL:0000047,1.12e-07,33;CL:0000031,1.12e-07,33;CL:0000404,1.12e-07,33;CL:0000128,1.68e-07,6;CL:0000126,1.68e-07,6;CL:0000127,1.68e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.08e-26!75;UBERON:0001016!2.08e-26!75;UBERON:0001017!1.60e-25!73;UBERON:0005743!1.60e-25!73;UBERON:0004121!2.97e-23!102;UBERON:0000924!2.97e-23!102;UBERON:0006601!2.97e-23!102;UBERON:0000955!6.17e-17!50;UBERON:0006238!6.17e-17!50;UBERON:0002346!8.72e-17!71;UBERON:0003075!8.72e-17!71;UBERON:0007284!8.72e-17!71;UBERON:0002616!1.11e-16!49;UBERON:0001049!1.69e-16!52;UBERON:0005068!1.69e-16!52;UBERON:0006241!1.69e-16!52;UBERON:0007135!1.69e-16!52;UBERON:0000033!2.46e-16!63;UBERON:0003056!3.28e-13!49;UBERON:0003080!1.82e-11!40;UBERON:0002780!6.05e-11!39;UBERON:0001890!6.05e-11!39;UBERON:0006240!6.05e-11!39;UBERON:0002020!9.81e-11!34;UBERON:0002791!7.05e-10!29;UBERON:0003528!7.05e-10!29;UBERON:0001893!7.05e-10!29;UBERON:0000956!1.52e-08!21;UBERON:0001869!1.52e-08!21;UBERON:0000203!1.52e-08!21;UBERON:0002619!7.40e-08!17;UBERON:0007811!1.57e-07!86;UBERON:0000010!2.40e-07!11;UBERON:0002410!9.47e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.09e-29,75;UBERON:0001017,1.46e-27,73;UBERON:0004121,3.21e-26,95;UBERON:0000924,3.21e-26,95;UBERON:0006601,3.21e-26,95;UBERON:0002346,4.76e-19,64;UBERON:0003075,4.76e-19,64;UBERON:0007284,4.76e-19,64;UBERON:0000073,7.26e-17,54;UBERON:0010371,2.36e-16,73;UBERON:0001049,2.50e-15,52;UBERON:0005068,2.50e-15,52;UBERON:0006241,2.50e-15,52;UBERON:0007135,2.50e-15,52;UBERON:0000955,3.95e-15,47;UBERON:0006238,3.95e-15,47;UBERON:0002616,9.33e-15,46;UBERON:0010314,9.01e-12,92;UBERON:0003056,1.47e-11,49;UBERON:0000010,1.76e-10,11;UBERON:0003528,2.27e-10,29;UBERON:0002791,2.27e-10,29;UBERON:0001893,2.27e-10,29;UBERON:0003080,2.79e-10,40;UBERON:0002020,5.59e-10,34;UBERON:0002619,1.29e-09,17;UBERON:0002780,1.30e-09,39;UBERON:0001890,1.30e-09,39;UBERON:0006240,1.30e-09,39;UBERON:0002410,1.45e-09,9;UBERON:0000956,4.40e-09,21;UBERON:0001869,4.40e-09,21;UBERON:0000203,4.40e-09,21;UBERON:0002021,3.95e-08,10;UBERON:0000411,3.95e-08,10;UBERON:0001950,3.95e-08,10;UBERON:0004733,8.69e-07,6;UBERON:0004732,8.69e-07,6;UBERON:0002028,8.69e-07,6;UBERON:0007277,8.69e-07,6|phase1_expression=0,0.348975407639361,0.909998478779072,0,0,0.671517087647559,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.53077922271926,0,0,0.799962113967033,1.37645568640302,1.14846392823004,1.7230479846363,1.07735616342945,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,2.9367480345869,14.8654355426127,35.5381004900128,14.2796018777407,18.8597002102055,16.0984384869167,25.8754615856949,0,0,0,4.11615097657515,4.58453503902011,12.3761302146586,0.809265843438391,0.528990979272033,0,13.5537812827653,18.6751907183339,0,0,0.7104801149461,31.4580116044325,47.6430698598728,0.829516898467821,0.810035629990144,1.47227472945967,5.99867067247988,6.40518768759679,1.95985278743926,0.862609239164127,1.83843757322004,20.9220173898839,11.3641730895817,11.981309593987,0.923204014111357,0.548925861614458,0,7.81712397203867,11.8180148106653,9.0150966188318,0.883885756421003,0.284743361598206,0.931997229126503,2.27178579999552,3.70300644523249,4.05810284182349,0,0,0,0,0,0.421333260395256,1.02258193546835,0.779358013808606,0,0,5.13305909657271,0,0,4.11332977921307,3.80039798212648,5.56076889516262,0.45673551887624,0,0,0.520455980298408,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0.494389935468748,0,0,0,0.220841518460394,0.484875253135222,0,2.34224637609238,8.16842156572475,0,0,0,0,10.9347166765521,9.15001205637253,1.25654352112864,4.17178368461463,9.2057564638919,16.8308316093244,26.4453258800445,0.305518091550949,0,0,0.631325567659422,0.390361328888111,0.459804208866946,1.0803727788321,1.35634336052144,2.58538696775046,4.09963904911519,3.37326208415024,2.84573707812917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| ||
|EntrezGene=12305 | |||
|HGNC= | |||
|UniProt=B0V2H9 | |||
|association_with_transcript=220bp_to_ENSMUST00000146472_5end | |||
|description=CAGE_peak_6_at_Ddr1_5end | |||
|id=chr17:35834647..35834695,- | |||
|ontology_enrichment_celltype=CL:0000055!8.18e-15!50;CL:0002319!2.76e-14!43;CL:0000221!2.05e-13!44;CL:0000133!2.05e-13!44;CL:0000393!5.49e-10!39;CL:0000211!5.49e-10!39;CL:0002321!8.20e-10!70;CL:0000220!8.20e-10!70;CL:0000540!1.12e-08!33;CL:0000047!1.12e-08!33;CL:0000031!1.12e-08!33;CL:0000404!1.12e-08!33;CL:0000333!2.21e-07!10;CL:0000095!2.21e-07!10;CL:0000243!2.21e-07!10;CL:0000123!2.21e-07!10;CL:0000125!2.21e-07!10;CL:0000030!2.21e-07!10;CL:0000339!2.21e-07!10;CL:0002453!8.01e-07!8;CL:0000107!9.47e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.67e-15,43;CL:0000221,1.44e-14,44;CL:0000133,1.44e-14,44;CL:0002321,4.08e-12,70;CL:0000333,1.55e-10,10;CL:0000095,1.55e-10,10;CL:0000243,1.55e-10,10;CL:0000123,1.55e-10,10;CL:0000125,1.55e-10,10;CL:0000030,1.55e-10,10;CL:0000339,1.55e-10,10;CL:0002453,1.12e-09,8;CL:0000107,1.45e-09,9;CL:0000393,5.37e-09,39;CL:0000211,5.37e-09,39;CL:0000540,1.12e-07,33;CL:0000047,1.12e-07,33;CL:0000031,1.12e-07,33;CL:0000404,1.12e-07,33;CL:0000128,1.68e-07,6;CL:0000126,1.68e-07,6;CL:0000127,1.68e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.08e-26!75;UBERON:0001016!2.08e-26!75;UBERON:0001017!1.60e-25!73;UBERON:0005743!1.60e-25!73;UBERON:0004121!2.97e-23!102;UBERON:0000924!2.97e-23!102;UBERON:0006601!2.97e-23!102;UBERON:0000955!6.17e-17!50;UBERON:0006238!6.17e-17!50;UBERON:0002346!8.72e-17!71;UBERON:0003075!8.72e-17!71;UBERON:0007284!8.72e-17!71;UBERON:0002616!1.11e-16!49;UBERON:0001049!1.69e-16!52;UBERON:0005068!1.69e-16!52;UBERON:0006241!1.69e-16!52;UBERON:0007135!1.69e-16!52;UBERON:0000033!2.46e-16!63;UBERON:0003056!3.28e-13!49;UBERON:0003080!1.82e-11!40;UBERON:0002780!6.05e-11!39;UBERON:0001890!6.05e-11!39;UBERON:0006240!6.05e-11!39;UBERON:0002020!9.81e-11!34;UBERON:0002791!7.05e-10!29;UBERON:0003528!7.05e-10!29;UBERON:0001893!7.05e-10!29;UBERON:0000956!1.52e-08!21;UBERON:0001869!1.52e-08!21;UBERON:0000203!1.52e-08!21;UBERON:0002619!7.40e-08!17;UBERON:0007811!1.57e-07!86;UBERON:0000010!2.40e-07!11;UBERON:0002410!9.47e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.09e-29,75;UBERON:0001017,1.46e-27,73;UBERON:0004121,3.21e-26,95;UBERON:0000924,3.21e-26,95;UBERON:0006601,3.21e-26,95;UBERON:0002346,4.76e-19,64;UBERON:0003075,4.76e-19,64;UBERON:0007284,4.76e-19,64;UBERON:0000073,7.26e-17,54;UBERON:0010371,2.36e-16,73;UBERON:0001049,2.50e-15,52;UBERON:0005068,2.50e-15,52;UBERON:0006241,2.50e-15,52;UBERON:0007135,2.50e-15,52;UBERON:0000955,3.95e-15,47;UBERON:0006238,3.95e-15,47;UBERON:0002616,9.33e-15,46;UBERON:0010314,9.01e-12,92;UBERON:0003056,1.47e-11,49;UBERON:0000010,1.76e-10,11;UBERON:0003528,2.27e-10,29;UBERON:0002791,2.27e-10,29;UBERON:0001893,2.27e-10,29;UBERON:0003080,2.79e-10,40;UBERON:0002020,5.59e-10,34;UBERON:0002619,1.29e-09,17;UBERON:0002780,1.30e-09,39;UBERON:0001890,1.30e-09,39;UBERON:0006240,1.30e-09,39;UBERON:0002410,1.45e-09,9;UBERON:0000956,4.40e-09,21;UBERON:0001869,4.40e-09,21;UBERON:0000203,4.40e-09,21;UBERON:0002021,3.95e-08,10;UBERON:0000411,3.95e-08,10;UBERON:0001950,3.95e-08,10;UBERON:0004733,8.69e-07,6;UBERON:0004732,8.69e-07,6;UBERON:0002028,8.69e-07,6;UBERON:0007277,8.69e-07,6 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,0,0,0.671517087647559,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.53077922271926,0,0,0.799962113967033,1.37645568640302,1.14846392823004,1.7230479846363,1.07735616342945,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,2.9367480345869,14.8654355426127,35.5381004900128,14.2796018777407,18.8597002102055,16.0984384869167,25.8754615856949,0,0,0,4.11615097657515,4.58453503902011,12.3761302146586,0.809265843438391,0.528990979272033,0,13.5537812827653,18.6751907183339,0,0,0.7104801149461,31.4580116044325,47.6430698598728,0.829516898467821,0.810035629990144,1.47227472945967,5.99867067247988,6.40518768759679,1.95985278743926,0.862609239164127,1.83843757322004,20.9220173898839,11.3641730895817,11.981309593987,0.923204014111357,0.548925861614458,0,7.81712397203867,11.8180148106653,9.0150966188318,0.883885756421003,0.284743361598206,0.931997229126503,2.27178579999552,3.70300644523249,4.05810284182349,0,0,0,0,0,0.421333260395256,1.02258193546835,0.779358013808606,0,0,5.13305909657271,0,0,4.11332977921307,3.80039798212648,5.56076889516262,0.45673551887624,0,0,0.520455980298408,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0.494389935468748,0,0,0,0.220841518460394,0.484875253135222,0,2.34224637609238,8.16842156572475,0,0,0,0,10.9347166765521,9.15001205637253,1.25654352112864,4.17178368461463,9.2057564638919,16.8308316093244,26.4453258800445,0.305518091550949,0,0,0.631325567659422,0.390361328888111,0.459804208866946,1.0803727788321,1.35634336052144,2.58538696775046,4.09963904911519,3.37326208415024,2.84573707812917,0.215567992932842,0.756424320671277,0.703804496655795,0.876782929710299,0.278047249225598,0,0,0.59710280045548,0,0,0,0.621377317606506,1.17263029990548,0.540186184383045,0.473489471170421,0,0.308534225774757,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,6.72927835405207,0.514523061896422,0,0.264450566663544,0.639864751605702,2.09013004674395,0.644337306610467,0.201683524623343,0.444756087689741,0,0,0,0,0.198956472041151,0,0,0,0,0.379335801906163,0.342745537829186,0,0,0.387904974335251,0.210407459670956,0.252946148497029,0,0,0.246794327843601,0,0.333690211432188,0.196558995113203,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0.372140947668503,0.312037673114561,0,0,0,1.10851914099963,1.32643988239339,0.162964976442026,0,0,0.502518772325447,0.952174563544055,1.17080188714679,0.472905432318573,0.44292937929755,0.159454768657487,0.163863314715738,0.863424909329478,0.867894351489069,0,0,0,1.10374698521893,18.3027672586083,38.4454332022426,5.24591825205361,0,7.88770548540642,10.1514073517126,20.2497993868831,16.2498782607735,15.81870585985,13.0215204162863,12.5491317519217,13.151513606009,12.2539211163422,1.28528526568723,2.2710413633323,0.178065603667255,0.325773918707152,5.44401405809367,1.32745138339963,1.69946445308487,0.906970670894253,0.188605079755898,1.77181135728464,0.614870295887855,1.03371317267288,1.09060118843252,1.42598951353889,0.632073515871632,0,0,0.340439605753788,0.540183282093931,0.388076051348264,0.643011105094777,1.59606210278046,0.713475270408282,1.31639216481697,0.304464949114599,0.23467170806371,0.63549621259146,0,0.32977250588296,1.13025098687134,0.422190474497091,0.358117032009409,0.984845398470368,0.582961673259701,24.4761398653873,0,0.619160603889667,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0,0,1.90934123603023,0.949007980743406,0.813277868507395,0.216010681643603,0.627264888043406,0,0.134864346384821,0.165306911450672,0.26175594198403,0,0,0,0.897099276263873,2.31641886639937,4.27792614356905,2.58319646955462,1.85851738039856,3.0512882047896,2.604087696879,4.40409246587986,0,0,0.316011120628178,0,0.308132871494482,0.25984164595559,0,0.198681354781265,0.120195449519969,0,0,0.15241361331,0.100826185136841,0.194915761479505,0,0.233753804363138,0.680191150845634,0.887943813496259,0.269141569828427,0,0,0.93841237725591,0.73260649706906,0.214368379079066,0,7.90652579663893,5.9842280745933,8.02053718815155,3.43706364687375,5.48066015816514,9.06472676867641,6.75022500231806,2.70192721934532,4.07828168085784,5.1776031175182,0.103787347584177,1.99512436700516,0.853668028770671,0.243106717068294,0,0.367687016900028,0.222246727801615,0.618105171716683,0.64183841918363,1.26348605881899,0.25347929989024,0.188626341386076,0.0936415074698824,0.384150914429216,0.17230640686684,0.952587382566147,0,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0,0.238436189947321,0.145346416632329,0.188218760830661,0.338458431566706,0.365855945745545,0.789209134313529,0.407412341537585,1.12228454331548,0.118635018124174,0.29551344712669,0.818462086339379,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,1.07435527024149,0.191288332068843,0.661774257358546,1.15933917810211 | |||
|short_description=p6@Ddr1 | |||
}} |
Revision as of 14:25, 13 September 2013
Short description: | p6@Ddr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ddr1_5end |
Coexpression cluster: | NA |
Association with transcript: | 220bp_to_ENSMUST00000146472_5end |
EntrezGene: | Ddr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.67e-15 | 43 |
ectodermal cell | 1.44e-14 | 44 |
neurectodermal cell | 1.44e-14 | 44 |
embryonic cell | 4.08e-12 | 70 |
migratory neural crest cell | 1.55e-10 | 10 |
neuron associated cell | 1.55e-10 | 10 |
glial cell (sensu Vertebrata) | 1.55e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 1.55e-10 | 10 |
glial cell | 1.55e-10 | 10 |
glioblast | 1.55e-10 | 10 |
glioblast (sensu Vertebrata) | 1.55e-10 | 10 |
oligodendrocyte precursor cell | 1.12e-09 | 8 |
autonomic neuron | 1.45e-09 | 9 |
electrically responsive cell | 5.37e-09 | 39 |
electrically active cell | 5.37e-09 | 39 |
neuron | 1.12e-07 | 33 |
neuronal stem cell | 1.12e-07 | 33 |
neuroblast | 1.12e-07 | 33 |
electrically signaling cell | 1.12e-07 | 33 |
oligodendrocyte | 1.68e-07 | 6 |
macroglial cell | 1.68e-07 | 6 |
astrocyte | 1.68e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.