FFCP PHASE1:Mm9::chr2:142199794..142199811,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=141|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:142199794..142199811,+|id=chr2:142199794..142199811,+|ontology_enrichment_celltype=CL:0002613!3.99e-09!3;CL:0000117!1.01e-07!23;CL:0000337!1.01e-07!23|ontology_enrichment_celltype_v019_2=CL:0002613,3.28e-58,3;CL:0000117,8.45e-09,23;CL:0000337,8.45e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002420!1.91e-08!8;UBERON:0007245!1.91e-08!8;UBERON:0010009!1.91e-08!8;UBERON:0010011!1.91e-08!8;UBERON:0000454!1.91e-08!8;UBERON:0003080!3.29e-08!40;UBERON:0001049!6.94e-08!52;UBERON:0005068!6.94e-08!52;UBERON:0006241!6.94e-08!52;UBERON:0007135!6.94e-08!52;UBERON:0002616!3.06e-07!49;UBERON:0002780!3.24e-07!39;UBERON:0001890!3.24e-07!39;UBERON:0006240!3.24e-07!39;UBERON:0000955!4.92e-07!50;UBERON:0006238!4.92e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.42e-35,5;UBERON:0002435,1.42e-35,5;UBERON:0000204,1.42e-35,5;UBERON:0010082,1.42e-35,5;UBERON:0002420,8.41e-23,8;UBERON:0007245,8.41e-23,8;UBERON:0010009,8.41e-23,8;UBERON:0010011,8.41e-23,8;UBERON:0000454,8.41e-23,8;UBERON:0003528,3.14e-07,29;UBERON:0002791,3.14e-07,29;UBERON:0001893,3.14e-07,29|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,0,0,0,0,0,0,0,0.153606533256243,2.1101806036831,3.7509933876988,0.52091337055676,0.279182999001381,0,0.30559649555362,0.589257170947335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0.51776031175182,0.103787347584177,0,0,0,0.419226325255965,0.183843508450014,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr2:142199794..142199811,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=141 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:142199794..142199811,+ | |||
|id=chr2:142199794..142199811,+ | |||
|ontology_enrichment_celltype=CL:0002613!3.99e-09!3;CL:0000117!1.01e-07!23;CL:0000337!1.01e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,3.28e-58,3;CL:0000117,8.45e-09,23;CL:0000337,8.45e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002420!1.91e-08!8;UBERON:0007245!1.91e-08!8;UBERON:0010009!1.91e-08!8;UBERON:0010011!1.91e-08!8;UBERON:0000454!1.91e-08!8;UBERON:0003080!3.29e-08!40;UBERON:0001049!6.94e-08!52;UBERON:0005068!6.94e-08!52;UBERON:0006241!6.94e-08!52;UBERON:0007135!6.94e-08!52;UBERON:0002616!3.06e-07!49;UBERON:0002780!3.24e-07!39;UBERON:0001890!3.24e-07!39;UBERON:0006240!3.24e-07!39;UBERON:0000955!4.92e-07!50;UBERON:0006238!4.92e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.42e-35,5;UBERON:0002435,1.42e-35,5;UBERON:0000204,1.42e-35,5;UBERON:0010082,1.42e-35,5;UBERON:0002420,8.41e-23,8;UBERON:0007245,8.41e-23,8;UBERON:0010009,8.41e-23,8;UBERON:0010011,8.41e-23,8;UBERON:0000454,8.41e-23,8;UBERON:0003528,3.14e-07,29;UBERON:0002791,3.14e-07,29;UBERON:0001893,3.14e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,0,0,0,0,0,0,0,0.153606533256243,2.1101806036831,3.7509933876988,0.52091337055676,0.279182999001381,0,0.30559649555362,0.589257170947335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0.51776031175182,0.103787347584177,0,0,0,0.419226325255965,0.183843508450014,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr2:142199794..142199811,+ | |||
}} |
Revision as of 22:15, 13 September 2013
Short description: | p@chr2:142199794..142199811, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:142199794..142199811, + |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 3.28e-58 | 3 |
CNS neuron (sensu Vertebrata) | 8.45e-09 | 23 |
neuroblast (sensu Vertebrata) | 8.45e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.42e-35 | 5 |
striatum | 1.42e-35 | 5 |
ventral part of telencephalon | 1.42e-35 | 5 |
future corpus striatum | 1.42e-35 | 5 |
basal ganglion | 8.41e-23 | 8 |
nuclear complex of neuraxis | 8.41e-23 | 8 |
aggregate regional part of brain | 8.41e-23 | 8 |
collection of basal ganglia | 8.41e-23 | 8 |
cerebral subcortex | 8.41e-23 | 8 |
brain grey matter | 3.14e-07 | 29 |
regional part of telencephalon | 3.14e-07 | 29 |
telencephalon | 3.14e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.