FFCP PHASE1:Mm9::chr7:147222262..147222299,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74237|HGNC=|MCL_coexpression_id=376|UniProt=E9Q244|association_with_transcript=0bp_to_ENSMUST00000167445,uc009kgm.2,uc009kgn.1_5end|description=CAGE_peak_1_at_Tubgcp2_5end|id=chr7:147222262..147222299,-|ontology_enrichment_celltype=CL:0000117!1.22e-14!23;CL:0000337!1.22e-14!23;CL:0000540!5.13e-11!33;CL:0000047!5.13e-11!33;CL:0000031!5.13e-11!33;CL:0000404!5.13e-11!33;CL:0002319!7.52e-09!43;CL:0000221!2.49e-08!44;CL:0000133!2.49e-08!44;CL:0000393!2.94e-08!39;CL:0000211!2.94e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.21e-14,23;CL:0000337,1.21e-14,23;CL:0000540,5.12e-11,33;CL:0000047,5.12e-11,33;CL:0000031,5.12e-11,33;CL:0000404,5.12e-11,33;CL:0002319,7.51e-09,43;CL:0000221,2.48e-08,44;CL:0000133,2.48e-08,44;CL:0000393,2.94e-08,39;CL:0000211,2.94e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.34e-21!73;UBERON:0005743!1.34e-21!73;UBERON:0000033!3.92e-21!63;UBERON:0001049!4.36e-21!52;UBERON:0005068!4.36e-21!52;UBERON:0006241!4.36e-21!52;UBERON:0007135!4.36e-21!52;UBERON:0000073!3.72e-20!75;UBERON:0001016!3.72e-20!75;UBERON:0000955!1.27e-19!50;UBERON:0006238!1.27e-19!50;UBERON:0000153!1.76e-19!94;UBERON:0002346!3.61e-19!71;UBERON:0003075!3.61e-19!71;UBERON:0007284!3.61e-19!71;UBERON:0002616!5.29e-19!49;UBERON:0007811!3.14e-18!86;UBERON:0003056!2.02e-17!49;UBERON:0004121!5.54e-17!102;UBERON:0000924!5.54e-17!102;UBERON:0006601!5.54e-17!102;UBERON:0002020!8.09e-17!34;UBERON:0003080!4.22e-15!40;UBERON:0002780!1.47e-14!39;UBERON:0001890!1.47e-14!39;UBERON:0006240!1.47e-14!39;UBERON:0002791!8.05e-14!29;UBERON:0003528!8.05e-14!29;UBERON:0001893!8.05e-14!29;UBERON:0000025!1.22e-10!114;UBERON:0004111!1.26e-09!122;UBERON:0000956!1.43e-09!21;UBERON:0001869!1.43e-09!21;UBERON:0000203!1.43e-09!21;UBERON:0000468!1.08e-07!333;UBERON:0000477!1.13e-07!154;UBERON:0002619!3.01e-07!17;UBERON:0003076!9.27e-07!12;UBERON:0003057!9.27e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.62e-23,64;UBERON:0003075,1.62e-23,64;UBERON:0007284,1.62e-23,64;UBERON:0000073,3.80e-22,54;UBERON:0001017,1.33e-21,73;UBERON:0001049,4.34e-21,52;UBERON:0005068,4.34e-21,52;UBERON:0006241,4.34e-21,52;UBERON:0007135,4.34e-21,52;UBERON:0010314,1.14e-20,92;UBERON:0001016,3.70e-20,75;UBERON:0010371,4.68e-20,73;UBERON:0004121,5.53e-20,95;UBERON:0000924,5.53e-20,95;UBERON:0006601,5.53e-20,95;UBERON:0000955,4.83e-18,47;UBERON:0006238,4.83e-18,47;UBERON:0002616,1.96e-17,46;UBERON:0003056,2.01e-17,49;UBERON:0002020,8.06e-17,34;UBERON:0003080,4.20e-15,40;UBERON:0002780,1.47e-14,39;UBERON:0001890,1.47e-14,39;UBERON:0006240,1.47e-14,39;UBERON:0003528,8.02e-14,29;UBERON:0002791,8.02e-14,29;UBERON:0001893,8.02e-14,29;UBERON:0000025,1.16e-10,114;UBERON:0004111,1.21e-09,122;UBERON:0000956,1.43e-09,21;UBERON:0001869,1.43e-09,21;UBERON:0000203,1.43e-09,21;UBERON:0002619,3.00e-07,17;UBERON:0003076,9.26e-07,12;UBERON:0003057,9.26e-07,12|phase1_expression=6.40595388419176,0,0,0,0.500895729946347,0.839396359559449,2.10251376535973,4.51931632045517,0.703943610758334,0.70219357896598,2.22583358693156,2.15384829287408,5.13602189793617,6.46910977900581,5.3297561890506,2.02475267389826,2.09868563438444,6.30924330716475,6.58149281307546,5.51706547337439,17.7740476415736,3.67376519443276,4.17919662622297,0.47997726838022,0.68822784320151,0,0,0.430942465371778,0.760093677825496,1.00812051903972,0.886922042621219,3.81018404075779,2.46025915033828,0,2.88851619751275,0.997407872150954,2.24586291888606,1.67412652294763,3.1253413780952,5.23523743973798,2.35292595212406,2.04913645487534,5.34061388334269,4.90997590104751,4.05507724878058,3.85448179539531,8.60630478782843,8.28495594245697,6.59058548203415,7.77719596297134,8.81914456239784,7.18762821824858,5.36904339384756,2.90144856804538,5.04140698713696,5.40244815675489,5.15760191889762,5.67239301505187,19.4223802425214,17.9856932952491,21.5502677192101,4.40497891689872,1.77858959222228,2.2497492932035,0.988866362566974,2.1314403448383,2.39680088414724,6.14749288514487,20.7379224616955,19.1708432431001,20.1911962897327,17.424710048632,16.565140571371,20.5784542681123,30.5747052548174,21.1420320920305,11.0115880999389,16.0886045987337,14.1318010595744,22.8163277773235,25.7080278522771,15.106487746146,12.0048689570594,14.069065250792,11.6126668310376,15.3206864446307,15.8032565687004,19.0127434741807,3.86203585999239,3.32514864469856,5.50742528533188,2.58127163094416,0,3.77792234146472,3.89865850468601,2.68816132258401,6.74133216632409,1.87473354835864,2.85764605063156,4.59341446863442,3.80277233397037,8.98285341900225,7.64415719119937,7.11066703153331,1.5154372870785,2.28023878927589,1.51657333504435,5.1382745873577,5.17875767294343,4.45326417194474,5.20455980298408,3.34912026143355,4.15107895060905,3.76806601381556,6.70255630673517,3.39299796590124,2.71914464507811,5.06097749219691,7.07688441559899,5.82360659810673,4.85851340612866,3.39412677194655,1.86391761218122,13.4679166625312,16.9651832518899,2.55457055208591,3.71426885968353,1.799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| ||
|EntrezGene=74237 | |||
|HGNC= | |||
|MCL_coexpression_id=376 | |||
|UniProt=E9Q244 | |||
|association_with_transcript=0bp_to_ENSMUST00000167445,uc009kgm.2,uc009kgn.1_5end | |||
|description=CAGE_peak_1_at_Tubgcp2_5end | |||
|id=chr7:147222262..147222299,- | |||
|ontology_enrichment_celltype=CL:0000117!1.22e-14!23;CL:0000337!1.22e-14!23;CL:0000540!5.13e-11!33;CL:0000047!5.13e-11!33;CL:0000031!5.13e-11!33;CL:0000404!5.13e-11!33;CL:0002319!7.52e-09!43;CL:0000221!2.49e-08!44;CL:0000133!2.49e-08!44;CL:0000393!2.94e-08!39;CL:0000211!2.94e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.21e-14,23;CL:0000337,1.21e-14,23;CL:0000540,5.12e-11,33;CL:0000047,5.12e-11,33;CL:0000031,5.12e-11,33;CL:0000404,5.12e-11,33;CL:0002319,7.51e-09,43;CL:0000221,2.48e-08,44;CL:0000133,2.48e-08,44;CL:0000393,2.94e-08,39;CL:0000211,2.94e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.34e-21!73;UBERON:0005743!1.34e-21!73;UBERON:0000033!3.92e-21!63;UBERON:0001049!4.36e-21!52;UBERON:0005068!4.36e-21!52;UBERON:0006241!4.36e-21!52;UBERON:0007135!4.36e-21!52;UBERON:0000073!3.72e-20!75;UBERON:0001016!3.72e-20!75;UBERON:0000955!1.27e-19!50;UBERON:0006238!1.27e-19!50;UBERON:0000153!1.76e-19!94;UBERON:0002346!3.61e-19!71;UBERON:0003075!3.61e-19!71;UBERON:0007284!3.61e-19!71;UBERON:0002616!5.29e-19!49;UBERON:0007811!3.14e-18!86;UBERON:0003056!2.02e-17!49;UBERON:0004121!5.54e-17!102;UBERON:0000924!5.54e-17!102;UBERON:0006601!5.54e-17!102;UBERON:0002020!8.09e-17!34;UBERON:0003080!4.22e-15!40;UBERON:0002780!1.47e-14!39;UBERON:0001890!1.47e-14!39;UBERON:0006240!1.47e-14!39;UBERON:0002791!8.05e-14!29;UBERON:0003528!8.05e-14!29;UBERON:0001893!8.05e-14!29;UBERON:0000025!1.22e-10!114;UBERON:0004111!1.26e-09!122;UBERON:0000956!1.43e-09!21;UBERON:0001869!1.43e-09!21;UBERON:0000203!1.43e-09!21;UBERON:0000468!1.08e-07!333;UBERON:0000477!1.13e-07!154;UBERON:0002619!3.01e-07!17;UBERON:0003076!9.27e-07!12;UBERON:0003057!9.27e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.62e-23,64;UBERON:0003075,1.62e-23,64;UBERON:0007284,1.62e-23,64;UBERON:0000073,3.80e-22,54;UBERON:0001017,1.33e-21,73;UBERON:0001049,4.34e-21,52;UBERON:0005068,4.34e-21,52;UBERON:0006241,4.34e-21,52;UBERON:0007135,4.34e-21,52;UBERON:0010314,1.14e-20,92;UBERON:0001016,3.70e-20,75;UBERON:0010371,4.68e-20,73;UBERON:0004121,5.53e-20,95;UBERON:0000924,5.53e-20,95;UBERON:0006601,5.53e-20,95;UBERON:0000955,4.83e-18,47;UBERON:0006238,4.83e-18,47;UBERON:0002616,1.96e-17,46;UBERON:0003056,2.01e-17,49;UBERON:0002020,8.06e-17,34;UBERON:0003080,4.20e-15,40;UBERON:0002780,1.47e-14,39;UBERON:0001890,1.47e-14,39;UBERON:0006240,1.47e-14,39;UBERON:0003528,8.02e-14,29;UBERON:0002791,8.02e-14,29;UBERON:0001893,8.02e-14,29;UBERON:0000025,1.16e-10,114;UBERON:0004111,1.21e-09,122;UBERON:0000956,1.43e-09,21;UBERON:0001869,1.43e-09,21;UBERON:0000203,1.43e-09,21;UBERON:0002619,3.00e-07,17;UBERON:0003076,9.26e-07,12;UBERON:0003057,9.26e-07,12 | |||
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| |||
|short_description=p1@Tubgcp2 | |||
}} |
Revision as of 12:13, 14 September 2013
Short description: | p1@Tubgcp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tubgcp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:376 |
Association with transcript: | 0bp_to_ENSMUST00000167445, uc009kgm.2, uc009kgn.1_5end |
EntrezGene: | Tubgcp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.21e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.21e-14 | 23 |
neuron | 5.12e-11 | 33 |
neuronal stem cell | 5.12e-11 | 33 |
neuroblast | 5.12e-11 | 33 |
electrically signaling cell | 5.12e-11 | 33 |
neural cell | 7.51e-09 | 43 |
ectodermal cell | 2.48e-08 | 44 |
neurectodermal cell | 2.48e-08 | 44 |
electrically responsive cell | 2.94e-08 | 39 |
electrically active cell | 2.94e-08 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.