FFCP PHASE1:Mm9::chr3:65762331..65762345,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:65762331..65762345,+|id=chr3:65762331..65762345,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,4.59e-10,1;CL:0002078,4.59e-10,1;CL:0000115,4.59e-10,1;CL:0002262,4.59e-10,1;CL:1000398,4.59e-10,1;CL:0000355,1.46e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.53e-27,3;DOID:4045,2.53e-27,3;DOID:0050686,4.99e-14,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,4.59e-10,1;UBERON:0001281,4.59e-10,1;UBERON:0000353,4.59e-10,1;UBERON:0003497,4.59e-10,1;UBERON:0003909,4.59e-10,1;UBERON:0003928,4.59e-10,1;UBERON:0003835,4.59e-10,1;UBERON:0003513,4.59e-10,1;UBERON:0001280,4.59e-10,1;UBERON:0004647,4.59e-10,1;UBERON:0002294,4.59e-10,1;UBERON:0001173,4.59e-10,1;UBERON:0004912,4.59e-10,1;UBERON:0005171,4.59e-10,1;UBERON:0001134,1.46e-09,9;UBERON:0002036,1.46e-09,9;UBERON:0002385,1.46e-09,9;UBERON:0000486,1.46e-09,9;UBERON:0007503,1.46e-09,9;UBERON:0001015,1.46e-09,9;UBERON:0002329,1.46e-09,9;UBERON:0003082,1.46e-09,9;UBERON:0003059,1.46e-09,9;UBERON:0007282,1.46e-09,9;UBERON:0004290,1.46e-09,9;UBERON:0009618,1.46e-09,9;UBERON:0000383,1.16e-08,10;UBERON:0007524,6.32e-08,11;UBERON:0003077,6.32e-08,11;UBERON:0007285,6.32e-08,11|phase1_expression=0.480446541314382,0,0.909998478779072,0,0,0.33575854382378,0.467225281191051,0.258246646883153,0,0,0.171217968225505,0.0797721589953364,0.342401459862411,0.524522414513984,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0.430761996159075,0,0,0,0.221730510655305,0,0,0,0.577703239502549,0.498703936075477,0.612508068787107,8.37063261473815,9.37602413428561,5.75876118371178,21.1763335691165,10.9287277593351,4.36959317728038,0,0,0.183546752161682,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2175607966302,0.860423876981386,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0.23517741427141,0.125666591329675,0.247194967734374,0,0.884610551949874,0.161766849947409,0,0,0,0,0,0.255457055208591,0.958520996047362,1.79970819298022,0.889491589511453,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,1.54408744268829,0.284163499395593,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0.163934945376675,0,0.315508219416257,0.390438744296638,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559805809294632,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0.576060012515731,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:65762331..65762345,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:65762331..65762345,+ | |||
|id=chr3:65762331..65762345,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,4.59e-10,1;CL:0002078,4.59e-10,1;CL:0000115,4.59e-10,1;CL:0002262,4.59e-10,1;CL:1000398,4.59e-10,1;CL:0000355,1.46e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.53e-27,3;DOID:4045,2.53e-27,3;DOID:0050686,4.99e-14,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,4.59e-10,1;UBERON:0001281,4.59e-10,1;UBERON:0000353,4.59e-10,1;UBERON:0003497,4.59e-10,1;UBERON:0003909,4.59e-10,1;UBERON:0003928,4.59e-10,1;UBERON:0003835,4.59e-10,1;UBERON:0003513,4.59e-10,1;UBERON:0001280,4.59e-10,1;UBERON:0004647,4.59e-10,1;UBERON:0002294,4.59e-10,1;UBERON:0001173,4.59e-10,1;UBERON:0004912,4.59e-10,1;UBERON:0005171,4.59e-10,1;UBERON:0001134,1.46e-09,9;UBERON:0002036,1.46e-09,9;UBERON:0002385,1.46e-09,9;UBERON:0000486,1.46e-09,9;UBERON:0007503,1.46e-09,9;UBERON:0001015,1.46e-09,9;UBERON:0002329,1.46e-09,9;UBERON:0003082,1.46e-09,9;UBERON:0003059,1.46e-09,9;UBERON:0007282,1.46e-09,9;UBERON:0004290,1.46e-09,9;UBERON:0009618,1.46e-09,9;UBERON:0000383,1.16e-08,10;UBERON:0007524,6.32e-08,11;UBERON:0003077,6.32e-08,11;UBERON:0007285,6.32e-08,11 | |||
|phase1_expression=0.480446541314382,0,0.909998478779072,0,0,0.33575854382378,0.467225281191051,0.258246646883153,0,0,0.171217968225505,0.0797721589953364,0.342401459862411,0.524522414513984,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0.430761996159075,0,0,0,0.221730510655305,0,0,0,0.577703239502549,0.498703936075477,0.612508068787107,8.37063261473815,9.37602413428561,5.75876118371178,21.1763335691165,10.9287277593351,4.36959317728038,0,0,0.183546752161682,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2175607966302,0.860423876981386,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0.23517741427141,0.125666591329675,0.247194967734374,0,0.884610551949874,0.161766849947409,0,0,0,0,0,0.255457055208591,0.958520996047362,1.79970819298022,0.889491589511453,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,1.54408744268829,0.284163499395593,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0.163934945376675,0,0.315508219416257,0.390438744296638,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559805809294632,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0.576060012515731,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:65762331..65762345,+ | |||
}} |
Revision as of 02:26, 14 September 2013
Short description: | p@chr3:65762331..65762345, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:65762331..65762345, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 4.59e-10 | 1 |
meso-epithelial cell | 4.59e-10 | 1 |
endothelial cell | 4.59e-10 | 1 |
endothelial cell of sinusoid | 4.59e-10 | 1 |
endothelial cell of hepatic sinusoid | 4.59e-10 | 1 |
multi-potent skeletal muscle stem cell | 1.46e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 4.59e-10 | 1 |
hepatic sinusoid | 4.59e-10 | 1 |
parenchyma | 4.59e-10 | 1 |
abdomen blood vessel | 4.59e-10 | 1 |
sinusoid | 4.59e-10 | 1 |
digestive system duct | 4.59e-10 | 1 |
abdominal segment blood vessel | 4.59e-10 | 1 |
trunk blood vessel | 4.59e-10 | 1 |
liver parenchyma | 4.59e-10 | 1 |
liver lobule | 4.59e-10 | 1 |
biliary system | 4.59e-10 | 1 |
biliary tree | 4.59e-10 | 1 |
biliary bud | 4.59e-10 | 1 |
hepatic duct | 4.59e-10 | 1 |
skeletal muscle tissue | 1.46e-09 | 9 |
striated muscle tissue | 1.46e-09 | 9 |
muscle tissue | 1.46e-09 | 9 |
multilaminar epithelium | 1.46e-09 | 9 |
epithelial vesicle | 1.46e-09 | 9 |
musculature | 1.46e-09 | 9 |
somite | 1.46e-09 | 9 |
myotome | 1.46e-09 | 9 |
presomitic mesoderm | 1.46e-09 | 9 |
presumptive segmental plate | 1.46e-09 | 9 |
dermomyotome | 1.46e-09 | 9 |
trunk paraxial mesoderm | 1.46e-09 | 9 |
musculature of body | 1.16e-08 | 10 |
dense mesenchyme tissue | 6.32e-08 | 11 |
paraxial mesoderm | 6.32e-08 | 11 |
presumptive paraxial mesoderm | 6.32e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.53e-27 | 3 |
muscle cancer | 2.53e-27 | 3 |
organ system cancer | 4.99e-14 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.