FFCP PHASE1:Mm9::chr18:80911813..80911827,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=231|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:80911813..80911827,+|id=chr18:80911813..80911827,+|ontology_enrichment_celltype=CL:0000838!1.85e-10!12;CL:0000542!2.24e-09!13;CL:0000051!2.24e-09!13;CL:0000084!2.32e-09!11;CL:0000827!2.32e-09!11;CL:0000791!6.54e-08!9;CL:0000789!6.54e-08!9;CL:0002420!6.54e-08!9;CL:0002419!6.54e-08!9;CL:0000790!6.54e-08!9;CL:0000738!1.34e-07!17;CL:0002087!1.34e-07!17;CL:0000988!1.78e-07!32;CL:0002032!1.78e-07!32;CL:0000037!1.78e-07!32;CL:0000566!1.78e-07!32;CL:0000837!1.78e-07!32;CL:0000893!3.17e-07!6;CL:0002489!3.17e-07!6;CL:0000898!3.17e-07!6;CL:0000809!3.17e-07!6;CL:0000810!3.17e-07!6;CL:0000895!3.17e-07!6;CL:0000808!3.17e-07!6;CL:0000894!3.17e-07!6;CL:0000806!3.17e-07!6;CL:0000807!3.17e-07!6;CL:0000805!3.17e-07!6;CL:0002425!3.17e-07!6;CL:0002436!3.17e-07!6;CL:0002427!3.17e-07!6;CL:0002428!3.17e-07!6;CL:0002429!3.17e-07!6;CL:0002433!3.17e-07!6;CL:0002431!3.17e-07!6;CL:0002432!3.17e-07!6;CL:0000624!5.11e-07!8|ontology_enrichment_celltype_v019_2=CL:0000838,1.82e-12,12;CL:0000624,3.38e-12,8;CL:0000542,1.68e-11,13;CL:0000051,1.68e-11,13;CL:0000988,4.84e-11,32;CL:0002032,4.84e-11,32;CL:0000037,4.84e-11,32;CL:0000837,4.84e-11,32;CL:0000791,7.23e-11,9;CL:0000789,7.23e-11,9;CL:0002420,7.23e-11,9;CL:0002419,7.23e-11,9;CL:0000790,7.23e-11,9;CL:0000893,1.38e-09,6;CL:0002489,1.38e-09,6;CL:0000898,1.38e-09,6;CL:0000809,1.38e-09,6;CL:0000810,1.38e-09,6;CL:0000895,1.38e-09,6;CL:0000808,1.38e-09,6;CL:0000894,1.38e-09,6;CL:0000806,1.38e-09,6;CL:0000807,1.38e-09,6;CL:0000805,1.38e-09,6;CL:0002425,1.38e-09,6;CL:0002436,1.38e-09,6;CL:0002427,1.38e-09,6;CL:0002428,1.38e-09,6;CL:0002429,1.38e-09,6;CL:0002433,1.38e-09,6;CL:0002431,1.38e-09,6;CL:0002432,1.38e-09,6;CL:0002320,1.70e-09,46;CL:0000134,1.70e-09,46;CL:0000084,6.28e-09,11;CL:0000827,6.28e-09,11;CL:0000738,8.99e-09,17;CL:0002087,8.99e-09,17;CL:0002031,3.10e-08,25;CL:0000219,6.26e-08,54;CL:0000213,1.20e-07,1;CL:0002078,1.20e-07,1;CL:0000115,1.20e-07,1;CL:0002262,1.20e-07,1;CL:1000398,1.20e-07,1;CL:0000945,1.83e-07,1;CL:0000236,1.83e-07,1;CL:0000826,1.83e-07,1;CL:0000815,3.67e-07,1;CL:0000792,3.67e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.70e-09,46;UBERON:0002394,1.20e-07,1;UBERON:0001281,1.20e-07,1;UBERON:0000353,1.20e-07,1;UBERON:0003497,1.20e-07,1;UBERON:0003909,1.20e-07,1;UBERON:0003928,1.20e-07,1;UBERON:0003835,1.20e-07,1;UBERON:0003513,1.20e-07,1;UBERON:0001280,1.20e-07,1;UBERON:0004647,1.20e-07,1;UBERON:0002294,1.20e-07,1;UBERON:0001173,1.20e-07,1;UBERON:0004912,1.20e-07,1;UBERON:0005171,1.20e-07,1;UBERON:0000029,2.79e-07,1;UBERON:0001097,2.79e-07,1;UBERON:0003968,2.79e-07,1;UBERON:0001467,2.79e-07,1;UBERON:0001374,3.20e-07,1;UBERON:0004252,3.20e-07,1;UBERON:0003663,3.20e-07,1;UBERON:0005090,3.20e-07,1;UBERON:0001630,3.20e-07,1;UBERON:0003661,3.20e-07,1;UBERON:0010890,3.20e-07,1;UBERON:0001383,3.20e-07,1|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.42035655785734,7.88416844049334,11.4691617897777,1.02730780935303,0.558405112967355,0.342401459862411,0.524522414513984,0,0,0,1.26184866143295,0.959801035240171,0,0,0.496454756004426,0.261199789138935,0.319984845586813,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,4.86569557567435,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,12.1743085254705,0.860423876981386,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.985903938436763,1.28326477414318,0,0,0,0,0,0,1.55362730188303,0,0,0,0,0,0.117588707135705,0,0,0.433798070759735,0,0,0,0.484875253135222,0,0,0,0,1.7972268675888,1.19980546198682,0.762421362438388,0,0,0,0,0,0,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0.776110112217047,0,0,0.703804496655795,0,0.834141747676794,1.0447564995665,0,0,0,0.257347907114715,0,0.414251545071004,0,0,0.473489471170421,0.393528463494808,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,0.439100230582101,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,1.51482556322624,0,0.390438744296638,0,0.477937595905104,0.222798674082394,0,0.404810701674894,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.98931751764888,0.161464426695906,0.241251699712623,0,0,0,0,0,0.206386867963223,0,0,0,0,1.35982743995084,2.93898049879682,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0.616265742988964,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0,0,0,0.0962118416403295,0.233753804363138,0.453460767230423,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0.476293691283074,0.115884325944855,0,0.412085900803307,0,0,0,0.238436189947321,0,0,0,0,0.263069711437843,0.271608227691724,0,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0.441182838239031,0.231867835620421|short_description=p@chr18:80911813..80911827,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=231 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:80911813..80911827,+ | |||
|id=chr18:80911813..80911827,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.85e-10!12;CL:0000542!2.24e-09!13;CL:0000051!2.24e-09!13;CL:0000084!2.32e-09!11;CL:0000827!2.32e-09!11;CL:0000791!6.54e-08!9;CL:0000789!6.54e-08!9;CL:0002420!6.54e-08!9;CL:0002419!6.54e-08!9;CL:0000790!6.54e-08!9;CL:0000738!1.34e-07!17;CL:0002087!1.34e-07!17;CL:0000988!1.78e-07!32;CL:0002032!1.78e-07!32;CL:0000037!1.78e-07!32;CL:0000566!1.78e-07!32;CL:0000837!1.78e-07!32;CL:0000893!3.17e-07!6;CL:0002489!3.17e-07!6;CL:0000898!3.17e-07!6;CL:0000809!3.17e-07!6;CL:0000810!3.17e-07!6;CL:0000895!3.17e-07!6;CL:0000808!3.17e-07!6;CL:0000894!3.17e-07!6;CL:0000806!3.17e-07!6;CL:0000807!3.17e-07!6;CL:0000805!3.17e-07!6;CL:0002425!3.17e-07!6;CL:0002436!3.17e-07!6;CL:0002427!3.17e-07!6;CL:0002428!3.17e-07!6;CL:0002429!3.17e-07!6;CL:0002433!3.17e-07!6;CL:0002431!3.17e-07!6;CL:0002432!3.17e-07!6;CL:0000624!5.11e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.82e-12,12;CL:0000624,3.38e-12,8;CL:0000542,1.68e-11,13;CL:0000051,1.68e-11,13;CL:0000988,4.84e-11,32;CL:0002032,4.84e-11,32;CL:0000037,4.84e-11,32;CL:0000837,4.84e-11,32;CL:0000791,7.23e-11,9;CL:0000789,7.23e-11,9;CL:0002420,7.23e-11,9;CL:0002419,7.23e-11,9;CL:0000790,7.23e-11,9;CL:0000893,1.38e-09,6;CL:0002489,1.38e-09,6;CL:0000898,1.38e-09,6;CL:0000809,1.38e-09,6;CL:0000810,1.38e-09,6;CL:0000895,1.38e-09,6;CL:0000808,1.38e-09,6;CL:0000894,1.38e-09,6;CL:0000806,1.38e-09,6;CL:0000807,1.38e-09,6;CL:0000805,1.38e-09,6;CL:0002425,1.38e-09,6;CL:0002436,1.38e-09,6;CL:0002427,1.38e-09,6;CL:0002428,1.38e-09,6;CL:0002429,1.38e-09,6;CL:0002433,1.38e-09,6;CL:0002431,1.38e-09,6;CL:0002432,1.38e-09,6;CL:0002320,1.70e-09,46;CL:0000134,1.70e-09,46;CL:0000084,6.28e-09,11;CL:0000827,6.28e-09,11;CL:0000738,8.99e-09,17;CL:0002087,8.99e-09,17;CL:0002031,3.10e-08,25;CL:0000219,6.26e-08,54;CL:0000213,1.20e-07,1;CL:0002078,1.20e-07,1;CL:0000115,1.20e-07,1;CL:0002262,1.20e-07,1;CL:1000398,1.20e-07,1;CL:0000945,1.83e-07,1;CL:0000236,1.83e-07,1;CL:0000826,1.83e-07,1;CL:0000815,3.67e-07,1;CL:0000792,3.67e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.70e-09,46;UBERON:0002394,1.20e-07,1;UBERON:0001281,1.20e-07,1;UBERON:0000353,1.20e-07,1;UBERON:0003497,1.20e-07,1;UBERON:0003909,1.20e-07,1;UBERON:0003928,1.20e-07,1;UBERON:0003835,1.20e-07,1;UBERON:0003513,1.20e-07,1;UBERON:0001280,1.20e-07,1;UBERON:0004647,1.20e-07,1;UBERON:0002294,1.20e-07,1;UBERON:0001173,1.20e-07,1;UBERON:0004912,1.20e-07,1;UBERON:0005171,1.20e-07,1;UBERON:0000029,2.79e-07,1;UBERON:0001097,2.79e-07,1;UBERON:0003968,2.79e-07,1;UBERON:0001467,2.79e-07,1;UBERON:0001374,3.20e-07,1;UBERON:0004252,3.20e-07,1;UBERON:0003663,3.20e-07,1;UBERON:0005090,3.20e-07,1;UBERON:0001630,3.20e-07,1;UBERON:0003661,3.20e-07,1;UBERON:0010890,3.20e-07,1;UBERON:0001383,3.20e-07,1 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.42035655785734,7.88416844049334,11.4691617897777,1.02730780935303,0.558405112967355,0.342401459862411,0.524522414513984,0,0,0,1.26184866143295,0.959801035240171,0,0,0.496454756004426,0.261199789138935,0.319984845586813,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,4.86569557567435,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,12.1743085254705,0.860423876981386,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.985903938436763,1.28326477414318,0,0,0,0,0,0,1.55362730188303,0,0,0,0,0,0.117588707135705,0,0,0.433798070759735,0,0,0,0.484875253135222,0,0,0,0,1.7972268675888,1.19980546198682,0.762421362438388,0,0,0,0,0,0,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0.776110112217047,0,0,0.703804496655795,0,0.834141747676794,1.0447564995665,0,0,0,0.257347907114715,0,0.414251545071004,0,0,0.473489471170421,0.393528463494808,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,0.439100230582101,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,1.51482556322624,0,0.390438744296638,0,0.477937595905104,0.222798674082394,0,0.404810701674894,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.98931751764888,0.161464426695906,0.241251699712623,0,0,0,0,0,0.206386867963223,0,0,0,0,1.35982743995084,2.93898049879682,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0.616265742988964,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0,0,0,0.0962118416403295,0.233753804363138,0.453460767230423,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0.476293691283074,0.115884325944855,0,0.412085900803307,0,0,0,0.238436189947321,0,0,0,0,0.263069711437843,0.271608227691724,0,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr18:80911813..80911827,+ | |||
}} |
Revision as of 16:50, 13 September 2013
Short description: | p@chr18:80911813..80911827, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:80911813..80911827, + |
Coexpression cluster: | MCL_coexpression_mm9:231 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.70e-09 | 46 |
bile duct | 1.20e-07 | 1 |
hepatic sinusoid | 1.20e-07 | 1 |
parenchyma | 1.20e-07 | 1 |
abdomen blood vessel | 1.20e-07 | 1 |
sinusoid | 1.20e-07 | 1 |
digestive system duct | 1.20e-07 | 1 |
abdominal segment blood vessel | 1.20e-07 | 1 |
trunk blood vessel | 1.20e-07 | 1 |
liver parenchyma | 1.20e-07 | 1 |
liver lobule | 1.20e-07 | 1 |
biliary system | 1.20e-07 | 1 |
biliary tree | 1.20e-07 | 1 |
biliary bud | 1.20e-07 | 1 |
hepatic duct | 1.20e-07 | 1 |
lymph node | 2.79e-07 | 1 |
axillary lymph node | 2.79e-07 | 1 |
peripheral lymph node | 2.79e-07 | 1 |
shoulder | 2.79e-07 | 1 |
biceps femoris | 3.20e-07 | 1 |
hindlimb stylopod muscle | 3.20e-07 | 1 |
hindlimb muscle | 3.20e-07 | 1 |
muscle structure | 3.20e-07 | 1 |
muscle organ | 3.20e-07 | 1 |
limb muscle | 3.20e-07 | 1 |
pelvic complex muscle | 3.20e-07 | 1 |
muscle of leg | 3.20e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.