FFCP PHASE1:Hg19::chr1:153333296..153333313,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1837|description=CAGE_peak_at_chr1:153333296..153333313,+|id=chr1:153333296..153333313,+|ontology_enrichment_celltype=CL:0002057!3.39e-67!42;CL:0000860!7.56e-62!45;CL:0000766!4.76e-50!76;CL:0002194!1.25e-46!63;CL:0000576!1.25e-46!63;CL:0000040!1.25e-46!63;CL:0000559!1.25e-46!63;CL:0002009!8.33e-45!65;CL:0000839!1.06e-40!70;CL:0000557!5.98e-40!71;CL:0000763!3.09e-32!112;CL:0000049!3.09e-32!112;CL:0000738!1.89e-26!140;CL:0002087!9.78e-25!119;CL:0002031!8.67e-21!124;CL:0000037!1.17e-20!172;CL:0000566!1.17e-20!172;CL:0002032!4.35e-20!165;CL:0000837!4.35e-20!165;CL:0000988!1.10e-18!182;CL:0002393!1.82e-09!9;CL:0002397!1.82e-09!9;CL:0000094!5.77e-09!8|ontology_enrichment_celltype_v019=CL:0000860;4.73e-81;33!CL:0002057;4.73e-81;33!CL:0000473;1.61e-55;39!CL:0000234;1.61e-55;39!CL:0000576;2.07e-46;48!CL:0000766;1.27e-28;69!CL:0000763;1.90e-14;100!CL:0002087;2.32e-10;104!CL:0000771;1.75e-09;2!CL:0000094;1.02e-08;8!CL:0000738;1.24e-08;136|ontology_enrichment_celltype_v019_2=CL:0000860,9.58e-79,42;CL:0002057,9.58e-79,42;CL:0000473,4.95e-68,48;CL:0000234,4.95e-68,48;CL:0000766,2.78e-56,72;CL:0002194,4.97e-53,59;CL:0000576,4.97e-53,59;CL:0000040,4.97e-53,59;CL:0000559,4.97e-53,59;CL:0002009,4.28e-51,61;CL:0000839,9.23e-47,66;CL:0000557,5.70e-46,67;CL:0000763,3.72e-35,108;CL:0000049,3.72e-35,108;CL:0000738,2.71e-28,136;CL:0002087,5.25e-26,115;CL:0002031,8.58e-23,120;CL:0000037,1.87e-21,168;CL:0002032,3.79e-21,161;CL:0000837,3.79e-21,161;CL:0000988,5.63e-20,177;CL:0000771,1.72e-09,2;CL:0000094,8.08e-09,8;CL:0000775,8.69e-07,3|ontology_enrichment_development_v019=CL:0002057;2.01e-57;42!CL:0000049;7.88e-12;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.88e-42!102;UBERON:0003061!1.88e-42!102;UBERON:0002193!1.25e-40!112;UBERON:0002371!4.95e-34!80;UBERON:0001474!8.88e-31!86;UBERON:0004765!1.15e-25!101;UBERON:0001434!1.15e-25!101;UBERON:0002405!7.45e-25!115;UBERON:0003081!3.38e-15!216;UBERON:0000178!8.51e-12!15;UBERON:0000179!8.51e-12!15;UBERON:0000463!8.51e-12!15;UBERON:0002204!1.78e-11!167;UBERON:0000926!2.19e-07!448;UBERON:0004120!2.19e-07!448;UBERON:0006603!2.19e-07!448|ontology_enrichment_uberon_v019=UBERON:0000178;1.49e-09;15!UBERON:0000179;1.49e-09;15!UBERON:0000463;1.49e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.95e-45,98;UBERON:0003061,6.95e-45,98;UBERON:0002193,1.30e-42,108;UBERON:0002371,8.79e-40,76;UBERON:0001474,2.11e-36,82;UBERON:0002405,9.34e-34,93;UBERON:0004765,1.37e-32,90;UBERON:0001434,1.12e-28,100;UBERON:0003081,5.65e-19,203;UBERON:0002204,1.66e-14,167;UBERON:0000178,1.46e-09,15;UBERON:0000179,1.46e-09,15;UBERON:0000463,1.46e-09,15;UBERON:0000926,2.09e-09,315;UBERON:0004120,2.09e-09,315;UBERON:0006603,2.09e-09,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.154816123316076,0,0,0.739508020333575,0,0,0,1.10799081706375,0.401088894940283,1.30206522429511,0,0.32389366601898,0,3.34415949192999,1.13362783106643,2.18325655069035,1.39457422143411,2.46700732813095,1.23882548358041,2.3015391385772,2.30544635876191,2.83778675866302,2.75796544589295,0.645484683583826,4.06279459783025,3.57660445130949,2.18324920046277,0.674170453335254,5.81559395504715,1.28371610830437,4.47535988059329,2.63881040149373,2.59302754908121,4.26224750532694,1.7412554317715,0,1.86846674698672,4.77372463987812,6.25779502104242,2.17188844705117,3.63239701580021,0.368277635987565,3.16462387440884,0.211255286311942,0.637812899895131,0.838634582033504,0.898629049171961,1.65194582125657,0.64290234678832,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,1.63647672354501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0.743155811443641,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,2.99161459204025,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50999940573032,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0.886860307073351,0,1.01489521846434,0.764637207142375,3.41788312304498,0.7146953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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1837 | |||
|description=CAGE_peak_at_chr1:153333296..153333313,+ | |||
|id=chr1:153333296..153333313,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.39e-67!42;CL:0000860!7.56e-62!45;CL:0000766!4.76e-50!76;CL:0002194!1.25e-46!63;CL:0000576!1.25e-46!63;CL:0000040!1.25e-46!63;CL:0000559!1.25e-46!63;CL:0002009!8.33e-45!65;CL:0000839!1.06e-40!70;CL:0000557!5.98e-40!71;CL:0000763!3.09e-32!112;CL:0000049!3.09e-32!112;CL:0000738!1.89e-26!140;CL:0002087!9.78e-25!119;CL:0002031!8.67e-21!124;CL:0000037!1.17e-20!172;CL:0000566!1.17e-20!172;CL:0002032!4.35e-20!165;CL:0000837!4.35e-20!165;CL:0000988!1.10e-18!182;CL:0002393!1.82e-09!9;CL:0002397!1.82e-09!9;CL:0000094!5.77e-09!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.73e-81;33!CL:0002057;4.73e-81;33!CL:0000473;1.61e-55;39!CL:0000234;1.61e-55;39!CL:0000576;2.07e-46;48!CL:0000766;1.27e-28;69!CL:0000763;1.90e-14;100!CL:0002087;2.32e-10;104!CL:0000771;1.75e-09;2!CL:0000094;1.02e-08;8!CL:0000738;1.24e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.58e-79,42;CL:0002057,9.58e-79,42;CL:0000473,4.95e-68,48;CL:0000234,4.95e-68,48;CL:0000766,2.78e-56,72;CL:0002194,4.97e-53,59;CL:0000576,4.97e-53,59;CL:0000040,4.97e-53,59;CL:0000559,4.97e-53,59;CL:0002009,4.28e-51,61;CL:0000839,9.23e-47,66;CL:0000557,5.70e-46,67;CL:0000763,3.72e-35,108;CL:0000049,3.72e-35,108;CL:0000738,2.71e-28,136;CL:0002087,5.25e-26,115;CL:0002031,8.58e-23,120;CL:0000037,1.87e-21,168;CL:0002032,3.79e-21,161;CL:0000837,3.79e-21,161;CL:0000988,5.63e-20,177;CL:0000771,1.72e-09,2;CL:0000094,8.08e-09,8;CL:0000775,8.69e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.01e-57;42!CL:0000049;7.88e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.88e-42!102;UBERON:0003061!1.88e-42!102;UBERON:0002193!1.25e-40!112;UBERON:0002371!4.95e-34!80;UBERON:0001474!8.88e-31!86;UBERON:0004765!1.15e-25!101;UBERON:0001434!1.15e-25!101;UBERON:0002405!7.45e-25!115;UBERON:0003081!3.38e-15!216;UBERON:0000178!8.51e-12!15;UBERON:0000179!8.51e-12!15;UBERON:0000463!8.51e-12!15;UBERON:0002204!1.78e-11!167;UBERON:0000926!2.19e-07!448;UBERON:0004120!2.19e-07!448;UBERON:0006603!2.19e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.49e-09;15!UBERON:0000179;1.49e-09;15!UBERON:0000463;1.49e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.95e-45,98;UBERON:0003061,6.95e-45,98;UBERON:0002193,1.30e-42,108;UBERON:0002371,8.79e-40,76;UBERON:0001474,2.11e-36,82;UBERON:0002405,9.34e-34,93;UBERON:0004765,1.37e-32,90;UBERON:0001434,1.12e-28,100;UBERON:0003081,5.65e-19,203;UBERON:0002204,1.66e-14,167;UBERON:0000178,1.46e-09,15;UBERON:0000179,1.46e-09,15;UBERON:0000463,1.46e-09,15;UBERON:0000926,2.09e-09,315;UBERON:0004120,2.09e-09,315;UBERON:0006603,2.09e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.154816123316076,0,0,0.739508020333575,0,0,0,1.10799081706375,0.401088894940283,1.30206522429511,0,0.32389366601898,0,3.34415949192999,1.13362783106643,2.18325655069035,1.39457422143411,2.46700732813095,1.23882548358041,2.3015391385772,2.30544635876191,2.83778675866302,2.75796544589295,0.645484683583826,4.06279459783025,3.57660445130949,2.18324920046277,0.674170453335254,5.81559395504715,1.28371610830437,4.47535988059329,2.63881040149373,2.59302754908121,4.26224750532694,1.7412554317715,0,1.86846674698672,4.77372463987812,6.25779502104242,2.17188844705117,3.63239701580021,0.368277635987565,3.16462387440884,0.211255286311942,0.637812899895131,0.838634582033504,0.898629049171961,1.65194582125657,0.64290234678832,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,1.63647672354501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0.743155811443641,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,2.99161459204025,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50999940573032,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0.886860307073351,0,1.01489521846434,0.764637207142375,3.41788312304498,0.714695326373367,1.64544909234478,0.648473311192717,0,3.96562588147135,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78257164304836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0.0788057072991982,0,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.320362237703084,0,0.414239055347196,1.48849806543585,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98527574661373,0,0.0645889098360061,0,0,0,0,4.13661821004227,0.342233301085281,0.0673520530145875,0.286888821570705,0,0.244209805832924,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr1:153333296..153333313,+ | |||
}} |
Revision as of 00:29, 12 September 2013
Short description: | p@chr1:153333296..153333313, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:153333296..153333313, + |
Coexpression cluster: | C1837_Neutrophils_Eosinophils_tongue_CD14_esophagus_Whole_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.58e-79 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.58e-79 | 42 |
defensive cell | 4.95e-68 | 48 |
phagocyte | 4.95e-68 | 48 |
myeloid leukocyte | 2.78e-56 | 72 |
monopoietic cell | 4.97e-53 | 59 |
monocyte | 4.97e-53 | 59 |
monoblast | 4.97e-53 | 59 |
promonocyte | 4.97e-53 | 59 |
macrophage dendritic cell progenitor | 4.28e-51 | 61 |
myeloid lineage restricted progenitor cell | 9.23e-47 | 66 |
granulocyte monocyte progenitor cell | 5.70e-46 | 67 |
myeloid cell | 3.72e-35 | 108 |
common myeloid progenitor | 3.72e-35 | 108 |
leukocyte | 2.71e-28 | 136 |
nongranular leukocyte | 5.25e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 8.58e-23 | 120 |
hematopoietic stem cell | 1.87e-21 | 168 |
hematopoietic oligopotent progenitor cell | 3.79e-21 | 161 |
hematopoietic multipotent progenitor cell | 3.79e-21 | 161 |
hematopoietic cell | 5.63e-20 | 177 |
eosinophil | 1.72e-09 | 2 |
granulocyte | 8.08e-09 | 8 |
neutrophil | 8.69e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.95e-45 | 98 |
blood island | 6.95e-45 | 98 |
hemolymphoid system | 1.30e-42 | 108 |
bone marrow | 8.79e-40 | 76 |
bone element | 2.11e-36 | 82 |
immune system | 9.34e-34 | 93 |
skeletal element | 1.37e-32 | 90 |
skeletal system | 1.12e-28 | 100 |
lateral plate mesoderm | 5.65e-19 | 203 |
musculoskeletal system | 1.66e-14 | 167 |
blood | 1.46e-09 | 15 |
haemolymphatic fluid | 1.46e-09 | 15 |
organism substance | 1.46e-09 | 15 |
mesoderm | 2.09e-09 | 315 |
mesoderm-derived structure | 2.09e-09 | 315 |
presumptive mesoderm | 2.09e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.