FFCP PHASE1:Hg19::chr11:1776214..1776241,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1509|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2529|TSSclassifier=S|UniProt=|association_with_transcript=-38bp_to_ENST00000429746_5end|coexpression_cluster_id=C71|description=CAGE_peak_5_at_CTSD_5end|id=chr11:1776214..1776241,-|ontology_enrichment_celltype=CL:0000839!3.44e-14!70;CL:0002194!2.24e-13!63;CL:0000576!2.24e-13!63;CL:0000040!2.24e-13!63;CL:0000559!2.24e-13!63;CL:0000766!6.03e-13!76;CL:0000557!7.46e-13!71;CL:0002009!3.34e-12!65;CL:0002057!2.60e-10!42;CL:0000860!2.70e-10!45|ontology_enrichment_celltype_v019=CL:0000473;4.60e-16;39!CL:0000234;4.60e-16;39!CL:0000860;6.18e-14;33!CL:0002057;6.18e-14;33!CL:0000576;9.48e-10;48!CL:0000766;3.66e-08;69!CL:0000235;3.87e-07;6|ontology_enrichment_celltype_v019_2=CL:0000839,1.39e-18,66;CL:0000557,5.15e-18,67;CL:0002194,6.39e-18,59;CL:0000576,6.39e-18,59;CL:0000040,6.39e-18,59;CL:0000559,6.39e-18,59;CL:0000473,9.62e-18,48;CL:0000234,9.62e-18,48;CL:0000766,2.35e-17,72;CL:0002009,9.46e-17,61;CL:0000860,4.20e-13,42;CL:0002057,4.20e-13,42;CL:0000235,4.37e-07,6;CL:0002320,5.06e-07,361|ontology_enrichment_development_v019=CL:0002057;6.30e-10;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.47e-12!115;UBERON:0002371!1.15e-11!80;UBERON:0001474!6.46e-11!86;UBERON:0004765!3.89e-10!101;UBERON:0001434!3.89e-10!101;UBERON:0002193!1.16e-08!112;UBERON:0000926!1.93e-08!448;UBERON:0004120!1.93e-08!448;UBERON:0006603!1.93e-08!448;UBERON:0000468!2.02e-08!659;UBERON:0002390!7.07e-08!102;UBERON:0003061!7.07e-08!102;UBERON:0002204!1.90e-07!167;UBERON:0000062!2.09e-07!511;UBERON:0000467!5.63e-07!625;UBERON:0000480!7.46e-07!626|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.01e-17,76;UBERON:0001434,4.38e-16,100;UBERON:0001474,6.63e-16,82;UBERON:0004765,2.09e-15,90;UBERON:0002405,4.56e-15,93;UBERON:0002193,6.27e-13,108;UBERON:0002390,6.38e-12,98;UBERON:0003061,6.38e-12,98;UBERON:0002204,1.65e-10,167;UBERON:0003081,2.71e-09,203;UBERON:0000926,1.19e-08,315;UBERON:0004120,1.19e-08,315;UBERON:0006603,1.19e-08,315|phase1_expression=0.726713517082227,4.49611100171065,1.55049844505568,7.00513088471913,4.91657203870017,3.48935409640147,0,1.26343974685366,2.87304191019822,0.245733936501509,5.58240934377942,0.218441372130172,0.791300934685361,0.618831764800233,2.98257638155124,1.34465029290355,1.80808358407193,0,1.46379839637152,0.246242116153576,1.83600622119828,0.313454721478088,0,0.273748850145768,0.376627918784408,0.152826811495903,0,0.0787107813136792,0.393364276848904,0,0.619264493264304,2.75826367343678,1.204823675113,1.47901604066715,0,0.284338464974843,0,0,1.80490002723128,1.95309783644267,7.61312612415743,11.0123846446453,4.37878464978117,6.97911546141911,3.77875943688809,4.36651310138069,6.97287110717054,2.87817521615278,3.09706370895104,4.02769349251011,2.30544635876191,2.60130452877444,2.41321976515633,2.5819387343353,1.35426486594342,8.65914761895982,5.73102915121476,4.71919317334678,4.59125838556354,1.60464513538047,1.91801137739712,2.96866170168044,3.39088217956774,2.98357325372886,4.06292934080018,0,0,5.02497330513487,2.60741459210101,3.47502151528187,5.44859552370032,1.47311054395026,2.53169909952708,1.26753171787165,0.425208599930087,0.628975936525128,1.57260083605093,1.20141514273205,0.964353520182481,0.285012743741249,1.39241674039363,0.547992461293902,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0.334372990781356,0,0.946895611469467,0,0.557052284425868,1.17842362989935,0.221533894583621,0,0.768547918354051,0.650296737799391,1.15106533222573,1.10540007114339,0,0,0,0,0.226618685395132,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0.710331756132051,0,0,0.534880391567015,0.289648807765598,0,2.01210257911091,0.12786256184353,1.0843174571537,1.50401373190767,2.89693037921647,2.3858578411533,4.86634870302636,0.0945348171640679,1.55210578223795,0.702678285545008,1.24430121722827,0.728590576585084,1.48313777113772,2.92092654289215,3.30846500868608,11.833258486179,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0.347140501607594,0,0,0.550236083880135,0.417989933073621,1.55050055501597,1.77883131343355,1.33888245105868,0.402829317109147,1.52054421143703,1.22031028774085,0,1.62028389576352,0.357198913136319,0,0.337834441449967,0,0,0.366403487860815,0,0,1.3082821564276,1.49091585508596,0.886413581652058,0.794455084879313,6.02356903572509,1.77334191099179,3.36406560085384,0,4.19334832309172,0.311211035399766,1.21239604862719,1.14423332179421,0.302714855289863,1.15235184896,0,1.24864030732128,0.570471821544449,0.896692083310806,0.23486899728753,0.485618833104395,0.280901613404497,0.204154171254893,0.982674538494144,0.929932030581889,0,3.21447008062124,0,4.31170885089743,0,1.25118519871964,0,1.31693286264251,1.83892677479412,2.25357088359895,0.340296549480063,0.717558542755448,1.06778694409284,0.211931901159562,1.50045548042201,0.618315175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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1509 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2529 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-38bp_to_ENST00000429746_5end | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_5_at_CTSD_5end | |||
|id=chr11:1776214..1776241,- | |||
|ontology_enrichment_celltype=CL:0000839!3.44e-14!70;CL:0002194!2.24e-13!63;CL:0000576!2.24e-13!63;CL:0000040!2.24e-13!63;CL:0000559!2.24e-13!63;CL:0000766!6.03e-13!76;CL:0000557!7.46e-13!71;CL:0002009!3.34e-12!65;CL:0002057!2.60e-10!42;CL:0000860!2.70e-10!45 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.60e-16;39!CL:0000234;4.60e-16;39!CL:0000860;6.18e-14;33!CL:0002057;6.18e-14;33!CL:0000576;9.48e-10;48!CL:0000766;3.66e-08;69!CL:0000235;3.87e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.39e-18,66;CL:0000557,5.15e-18,67;CL:0002194,6.39e-18,59;CL:0000576,6.39e-18,59;CL:0000040,6.39e-18,59;CL:0000559,6.39e-18,59;CL:0000473,9.62e-18,48;CL:0000234,9.62e-18,48;CL:0000766,2.35e-17,72;CL:0002009,9.46e-17,61;CL:0000860,4.20e-13,42;CL:0002057,4.20e-13,42;CL:0000235,4.37e-07,6;CL:0002320,5.06e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;6.30e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.47e-12!115;UBERON:0002371!1.15e-11!80;UBERON:0001474!6.46e-11!86;UBERON:0004765!3.89e-10!101;UBERON:0001434!3.89e-10!101;UBERON:0002193!1.16e-08!112;UBERON:0000926!1.93e-08!448;UBERON:0004120!1.93e-08!448;UBERON:0006603!1.93e-08!448;UBERON:0000468!2.02e-08!659;UBERON:0002390!7.07e-08!102;UBERON:0003061!7.07e-08!102;UBERON:0002204!1.90e-07!167;UBERON:0000062!2.09e-07!511;UBERON:0000467!5.63e-07!625;UBERON:0000480!7.46e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.01e-17,76;UBERON:0001434,4.38e-16,100;UBERON:0001474,6.63e-16,82;UBERON:0004765,2.09e-15,90;UBERON:0002405,4.56e-15,93;UBERON:0002193,6.27e-13,108;UBERON:0002390,6.38e-12,98;UBERON:0003061,6.38e-12,98;UBERON:0002204,1.65e-10,167;UBERON:0003081,2.71e-09,203;UBERON:0000926,1.19e-08,315;UBERON:0004120,1.19e-08,315;UBERON:0006603,1.19e-08,315 | |||
|phase1_expression=0.726713517082227,4.49611100171065,1.55049844505568,7.00513088471913,4.91657203870017,3.48935409640147,0,1.26343974685366,2.87304191019822,0.245733936501509,5.58240934377942,0.218441372130172,0.791300934685361,0.618831764800233,2.98257638155124,1.34465029290355,1.80808358407193,0,1.46379839637152,0.246242116153576,1.83600622119828,0.313454721478088,0,0.273748850145768,0.376627918784408,0.152826811495903,0,0.0787107813136792,0.393364276848904,0,0.619264493264304,2.75826367343678,1.204823675113,1.47901604066715,0,0.284338464974843,0,0,1.80490002723128,1.95309783644267,7.61312612415743,11.0123846446453,4.37878464978117,6.97911546141911,3.77875943688809,4.36651310138069,6.97287110717054,2.87817521615278,3.09706370895104,4.02769349251011,2.30544635876191,2.60130452877444,2.41321976515633,2.5819387343353,1.35426486594342,8.65914761895982,5.73102915121476,4.71919317334678,4.59125838556354,1.60464513538047,1.91801137739712,2.96866170168044,3.39088217956774,2.98357325372886,4.06292934080018,0,0,5.02497330513487,2.60741459210101,3.47502151528187,5.44859552370032,1.47311054395026,2.53169909952708,1.26753171787165,0.425208599930087,0.628975936525128,1.57260083605093,1.20141514273205,0.964353520182481,0.285012743741249,1.39241674039363,0.547992461293902,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0.334372990781356,0,0.946895611469467,0,0.557052284425868,1.17842362989935,0.221533894583621,0,0.768547918354051,0.650296737799391,1.15106533222573,1.10540007114339,0,0,0,0,0.226618685395132,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0.710331756132051,0,0,0.534880391567015,0.289648807765598,0,2.01210257911091,0.12786256184353,1.0843174571537,1.50401373190767,2.89693037921647,2.3858578411533,4.86634870302636,0.0945348171640679,1.55210578223795,0.702678285545008,1.24430121722827,0.728590576585084,1.48313777113772,2.92092654289215,3.30846500868608,11.833258486179,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0.347140501607594,0,0,0.550236083880135,0.417989933073621,1.55050055501597,1.77883131343355,1.33888245105868,0.402829317109147,1.52054421143703,1.22031028774085,0,1.62028389576352,0.357198913136319,0,0.337834441449967,0,0,0.366403487860815,0,0,1.3082821564276,1.49091585508596,0.886413581652058,0.794455084879313,6.02356903572509,1.77334191099179,3.36406560085384,0,4.19334832309172,0.311211035399766,1.21239604862719,1.14423332179421,0.302714855289863,1.15235184896,0,1.24864030732128,0.570471821544449,0.896692083310806,0.23486899728753,0.485618833104395,0.280901613404497,0.204154171254893,0.982674538494144,0.929932030581889,0,3.21447008062124,0,4.31170885089743,0,1.25118519871964,0,1.31693286264251,1.83892677479412,2.25357088359895,0.340296549480063,0.717558542755448,1.06778694409284,0.211931901159562,1.50045548042201,0.618315175430633,0.515281080091258,0.930584281657949,1.18143432568886,0.194874010322397,0.252433774244115,0.276149695926898,1.45481451136931,1.77504796258307,0.806016785821122,0.169560592310488,0,0,0.286804595389004,0.243947412259191,0.265059536642971,1.2781333715647,0.414644220061482,1.00928340350251,0.36497735907583,1.56449532329816,3.85944562915731,0,0.928735856063958,4.33127689001751,1.53798840051797,1.01150814046861,1.92808823906786,2.09558548191549,1.08939722046203,1.18635309555548,1.48314438976181,0.98110732562673,0.38474715694639,9.59602091012043,2.80483547606892,0.8231480226628,4.41026134156626,7.60530208930985,9.82827216677626,2.36315962672562,0.441463099414651,0.614942192715568,0.171567810298526,0.439001141634502,1.1240175325762,0.402115889646523,0.185176890317059,0.325808305310325,0,2.88662684050547,0.34779121492523,0.352226082707465,1.01056513432752,1.38895653772983,2.66355813128438,4.74122638775565,4.29243081047436,11.8184162921951,7.02012795417713,16.0521655271827,0,0.335964256397719,0,0.626909658919938,0.290633938513962,1.53353071666084,2.46331618947972,2.72950145441001,1.86595303986695,1.44119953416961,1.38866676769018,0.761974731506028,4.20187268114105,3.51652341630141,5.13217338068116,3.70178973731965,1.8020583470635,4.0015700568281,0.224262168690721,0.43596006883328,0.1466765716419,0.904902010304444,3.57656445851882,0,0,7.28052058379563,0,1.41849132023278,0.799266537048298,0.857867961948885,1.08524321078289,0,0,0.355391948742546,0,1.50719688529793,0,1.89948683245908,52.2982256757119,40.1805673145701,52.7084848707579,0.239624855491583,2.29723871668228,0,1.73737568001095,5.54786070886035,0.537182889719687,0.224170287987055,0.394061520403854,0.862510299438069,0.641715181398742,0.76228387266739,0,0,0.167516265334349,0,1.49801404789436,5.9832291840805,0.828831026872071,0.24538298343828,9.00306937907419,3.25518028439683,1.03985430765404,1.24900292158013,1.41932173530541,0.702848489956279,0.902838299183157,38.6592756895174,1.03473071292505,0.664225598535437,0.737476674166813,0.434418072340414,2.74121620447837,4.80400793335198,0.206768026122887,1.72571360654893,1.06727557803444,0.606255142892519,0,0.604780586659361,0.99243123127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| |||
|short_description=p5@CTSD | |||
}} |
Revision as of 16:57, 10 September 2013
Short description: | p5@CTSD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CTSD_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | -38bp_to_ENST00000429746_5end |
EntrezGene: | CTSD |
HGNC: | 2529 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 1.39e-18 | 66 |
granulocyte monocyte progenitor cell | 5.15e-18 | 67 |
monopoietic cell | 6.39e-18 | 59 |
monocyte | 6.39e-18 | 59 |
monoblast | 6.39e-18 | 59 |
promonocyte | 6.39e-18 | 59 |
defensive cell | 9.62e-18 | 48 |
phagocyte | 9.62e-18 | 48 |
myeloid leukocyte | 2.35e-17 | 72 |
macrophage dendritic cell progenitor | 9.46e-17 | 61 |
classical monocyte | 4.20e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.20e-13 | 42 |
macrophage | 4.37e-07 | 6 |
connective tissue cell | 5.06e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.01e-17 | 76 |
skeletal system | 4.38e-16 | 100 |
bone element | 6.63e-16 | 82 |
skeletal element | 2.09e-15 | 90 |
immune system | 4.56e-15 | 93 |
hemolymphoid system | 6.27e-13 | 108 |
hematopoietic system | 6.38e-12 | 98 |
blood island | 6.38e-12 | 98 |
musculoskeletal system | 1.65e-10 | 167 |
lateral plate mesoderm | 2.71e-09 | 203 |
mesoderm | 1.19e-08 | 315 |
mesoderm-derived structure | 1.19e-08 | 315 |
presumptive mesoderm | 1.19e-08 | 315 |
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