FFCP PHASE1:Hg19::chr12:7592633..7592671,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-47bp_to_ENST00000538078_5end|description=CAGE_peak_1_at_ENST00000538078_5end|id=chr12:7592633..7592671,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000039;2.63e-10;7!CL:0000586;2.63e-10;7!CL:0000082;4.81e-08;19|ontology_enrichment_celltype_v019_2=CL:0000039,1.13e-10,7;CL:0000586,1.13e-10,7;CL:0000082,5.65e-08,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0050615;3.73e-13;16!DOID:1324;2.30e-10;15!DOID:3908;1.25e-08;5!DOID:4556;5.15e-07;3|ontology_enrichment_disease_v019_2=DOID:0050615,4.67e-13,16;DOID:1324,2.83e-10,15;DOID:3908,1.14e-08,5;DOID:3095,5.82e-07,22;DOID:2994,5.82e-07,22;DOID:4556,6.19e-07,3|ontology_enrichment_uberon=UBERON:0007023!9.47e-10!115;UBERON:0001049!2.04e-09!57;UBERON:0005068!2.04e-09!57;UBERON:0006241!2.04e-09!57;UBERON:0007135!2.04e-09!57;UBERON:0003075!2.08e-09!86;UBERON:0007284!2.08e-09!86;UBERON:0002616!2.84e-09!59;UBERON:0002020!3.11e-09!34;UBERON:0003528!3.11e-09!34;UBERON:0002346!3.82e-09!90;UBERON:0001869!4.05e-09!32;UBERON:0002780!4.25e-09!41;UBERON:0001890!4.25e-09!41;UBERON:0006240!4.25e-09!41;UBERON:0001893!1.23e-08!34;UBERON:0003080!1.26e-08!42;UBERON:0002791!2.99e-08!33;UBERON:0003056!3.55e-08!61;UBERON:0002619!3.50e-07!22;UBERON:0001950!3.66e-07!20;UBERON:0000956!6.57e-07!25;UBERON:0000203!6.57e-07!25|ontology_enrichment_uberon_v019=UBERON:0002619;7.06e-14;22!UBERON:0001950;3.64e-12;20!UBERON:0000956;4.30e-12;25!UBERON:0000203;4.30e-12;25!UBERON:0002791;2.05e-10;32!UBERON:0001869;2.05e-10;32!UBERON:0002780;1.01e-09;41!UBERON:0001890;1.01e-09;41!UBERON:0003528;1.99e-09;34!UBERON:0002020;1.99e-09;34!UBERON:0001893;1.32e-08;34!UBERON:0002021;2.46e-08;5!UBERON:0004802;4.81e-08;19!UBERON:0000115;4.81e-08;19!UBERON:0002048;7.39e-07;22!UBERON:0004807;7.39e-07;22!UBERON:0000117;7.39e-07;22!UBERON:0000171;7.39e-07;22!UBERON:0000170;7.39e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0002619,7.98e-14,22;UBERON:0001950,4.50e-12,20;UBERON:0000956,4.78e-12,25;UBERON:0000203,4.78e-12,25;UBERON:0002791,2.93e-11,32;UBERON:0001869,2.93e-11,32;UBERON:0003528,1.65e-10,34;UBERON:0002020,1.65e-10,34;UBERON:0001893,1.65e-10,34;UBERON:0002780,2.66e-10,41;UBERON:0001890,2.66e-10,41;UBERON:0003080,2.66e-10,41;UBERON:0006240,2.66e-10,41;UBERON:0002021,2.12e-08,5;UBERON:0004802,5.65e-08,19;UBERON:0000115,5.65e-08,19;UBERON:0003056,1.31e-07,61;UBERON:0000073,1.51e-07,53;UBERON:0002616,1.51e-07,53;UBERON:0001049,4.82e-07,56;UBERON:0005068,4.82e-07,56;UBERON:0006241,4.82e-07,56;UBERON:0007135,4.82e-07,56;UBERON:0002048,8.46e-07,22;UBERON:0000117,8.46e-07,22;UBERON:0000171,8.46e-07,22;UBERON:0000170,8.46e-07,22;UBERON:0005597,8.46e-07,22;UBERON:0000118,8.46e-07,22|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0.495065411840187,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0.125542639594803,0.229240217243854,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0.217010870715852,0,0.32389366601898,0,0.145398238779565,0.755751887377619,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0.211255286311942,0,0,0.22465726229299,0,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0.260118695119756,0.164437904603676,0,0,0.14828656316206,0.535081656179426,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0,0.289693037921647,0,0,0.283604451492204,0.665188192387692,0.351339142772504,0.589405839739707,0,0,0,0.348259474598534,0,0.238490624305342,0,0.371457501329565,0.198762407366705,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0,0,0,0.982297011124877,0.22452937262617,0.675668882899933,0,0,0.183201743930407,0,3.87780264148325,0,0,0.12663051166458,0.529636723252875,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0.933633106199299,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0.23486899728753,0,0.140450806702248,0.408308342509787,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0.168336113954066,0.500474079487857,0,0,0,0.300476117813194,0.113432183160021,0.538168907066586,1.06778694409284,0.211931901159562,0,0.618315175430633,0.772921620136887,0.18611685633159,0,0.0974370051611986,0.252433774244115,0.184099797284599,0.484938170456436,0.710019185033229,0.806016785821122,0,0,0,0.286804595389004,0.243947412259191,0.662648841607426,0.116193942869518,0.310983165046111,0,0,0,1.28648187638577,0,0,0.721879481669586,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0.737930631258681,0.343135620597051,0,0,0,0.370353780634118,0.32580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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-47bp_to_ENST00000538078_5end | |||
|description=CAGE_peak_1_at_ENST00000538078_5end | |||
|id=chr12:7592633..7592671,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.63e-10;7!CL:0000586;2.63e-10;7!CL:0000082;4.81e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.13e-10,7;CL:0000586,1.13e-10,7;CL:0000082,5.65e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050615;3.73e-13;16!DOID:1324;2.30e-10;15!DOID:3908;1.25e-08;5!DOID:4556;5.15e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0050615,4.67e-13,16;DOID:1324,2.83e-10,15;DOID:3908,1.14e-08,5;DOID:3095,5.82e-07,22;DOID:2994,5.82e-07,22;DOID:4556,6.19e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.47e-10!115;UBERON:0001049!2.04e-09!57;UBERON:0005068!2.04e-09!57;UBERON:0006241!2.04e-09!57;UBERON:0007135!2.04e-09!57;UBERON:0003075!2.08e-09!86;UBERON:0007284!2.08e-09!86;UBERON:0002616!2.84e-09!59;UBERON:0002020!3.11e-09!34;UBERON:0003528!3.11e-09!34;UBERON:0002346!3.82e-09!90;UBERON:0001869!4.05e-09!32;UBERON:0002780!4.25e-09!41;UBERON:0001890!4.25e-09!41;UBERON:0006240!4.25e-09!41;UBERON:0001893!1.23e-08!34;UBERON:0003080!1.26e-08!42;UBERON:0002791!2.99e-08!33;UBERON:0003056!3.55e-08!61;UBERON:0002619!3.50e-07!22;UBERON:0001950!3.66e-07!20;UBERON:0000956!6.57e-07!25;UBERON:0000203!6.57e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.06e-14;22!UBERON:0001950;3.64e-12;20!UBERON:0000956;4.30e-12;25!UBERON:0000203;4.30e-12;25!UBERON:0002791;2.05e-10;32!UBERON:0001869;2.05e-10;32!UBERON:0002780;1.01e-09;41!UBERON:0001890;1.01e-09;41!UBERON:0003528;1.99e-09;34!UBERON:0002020;1.99e-09;34!UBERON:0001893;1.32e-08;34!UBERON:0002021;2.46e-08;5!UBERON:0004802;4.81e-08;19!UBERON:0000115;4.81e-08;19!UBERON:0002048;7.39e-07;22!UBERON:0004807;7.39e-07;22!UBERON:0000117;7.39e-07;22!UBERON:0000171;7.39e-07;22!UBERON:0000170;7.39e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,7.98e-14,22;UBERON:0001950,4.50e-12,20;UBERON:0000956,4.78e-12,25;UBERON:0000203,4.78e-12,25;UBERON:0002791,2.93e-11,32;UBERON:0001869,2.93e-11,32;UBERON:0003528,1.65e-10,34;UBERON:0002020,1.65e-10,34;UBERON:0001893,1.65e-10,34;UBERON:0002780,2.66e-10,41;UBERON:0001890,2.66e-10,41;UBERON:0003080,2.66e-10,41;UBERON:0006240,2.66e-10,41;UBERON:0002021,2.12e-08,5;UBERON:0004802,5.65e-08,19;UBERON:0000115,5.65e-08,19;UBERON:0003056,1.31e-07,61;UBERON:0000073,1.51e-07,53;UBERON:0002616,1.51e-07,53;UBERON:0001049,4.82e-07,56;UBERON:0005068,4.82e-07,56;UBERON:0006241,4.82e-07,56;UBERON:0007135,4.82e-07,56;UBERON:0002048,8.46e-07,22;UBERON:0000117,8.46e-07,22;UBERON:0000171,8.46e-07,22;UBERON:0000170,8.46e-07,22;UBERON:0005597,8.46e-07,22;UBERON:0000118,8.46e-07,22 | |||
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| |||
|short_description=p1@ENST00000538078 | |||
}} |
Revision as of 00:27, 11 September 2013
Short description: | p1@ENST00000538078 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000538078_5end |
Coexpression cluster: | NA |
Association with transcript: | -47bp_to_ENST00000538078_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.13e-10 | 7 |
germ cell | 1.13e-10 | 7 |
epithelial cell of lung | 5.65e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 7.98e-14 | 22 |
neocortex | 4.50e-12 | 20 |
cerebral cortex | 4.78e-12 | 25 |
pallium | 4.78e-12 | 25 |
regional part of telencephalon | 2.93e-11 | 32 |
cerebral hemisphere | 2.93e-11 | 32 |
brain grey matter | 1.65e-10 | 34 |
gray matter | 1.65e-10 | 34 |
telencephalon | 1.65e-10 | 34 |
regional part of forebrain | 2.66e-10 | 41 |
forebrain | 2.66e-10 | 41 |
anterior neural tube | 2.66e-10 | 41 |
future forebrain | 2.66e-10 | 41 |
occipital lobe | 2.12e-08 | 5 |
respiratory tract epithelium | 5.65e-08 | 19 |
lung epithelium | 5.65e-08 | 19 |
pre-chordal neural plate | 1.31e-07 | 61 |
regional part of nervous system | 1.51e-07 | 53 |
regional part of brain | 1.51e-07 | 53 |
neural tube | 4.82e-07 | 56 |
neural rod | 4.82e-07 | 56 |
future spinal cord | 4.82e-07 | 56 |
neural keel | 4.82e-07 | 56 |
lung | 8.46e-07 | 22 |
respiratory tube | 8.46e-07 | 22 |
respiration organ | 8.46e-07 | 22 |
pair of lungs | 8.46e-07 | 22 |
lung primordium | 8.46e-07 | 22 |
lung bud | 8.46e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
respiratory system cancer | 4.67e-13 | 16 |
lung cancer | 2.83e-10 | 15 |
non-small cell lung carcinoma | 1.14e-08 | 5 |
germ cell and embryonal cancer | 5.82e-07 | 22 |
germ cell cancer | 5.82e-07 | 22 |
lung large cell carcinoma | 6.19e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.