FFCP PHASE1:Hg19::chr13:99910620..99910660,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2841|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4472|TSSclassifier=S|UniProt=Q5JUH9|association_with_transcript=0bp_to_ENST00000416594_5end|coexpression_cluster_id=C3320|description=CAGE_peak_1_at_GPR18_5end|id=chr13:99910620..99910660,-|ontology_enrichment_celltype=CL:0000738!1.48e-65!140;CL:0002087!1.56e-64!119;CL:0000037!7.40e-61!172;CL:0000566!7.40e-61!172;CL:0000988!4.12e-59!182;CL:0002032!2.58e-55!165;CL:0000837!2.58e-55!165;CL:0002031!2.14e-53!124;CL:0000542!4.26e-45!53;CL:0000051!4.26e-45!53;CL:0000838!5.08e-44!52;CL:0000945!3.09e-22!24;CL:0000826!3.09e-22!24;CL:0002057!1.73e-21!42;CL:0000084!5.10e-20!25;CL:0000827!5.10e-20!25;CL:0000766!1.49e-19!76;CL:0000860!3.89e-19!45;CL:0002194!1.05e-18!63;CL:0000576!1.05e-18!63;CL:0000040!1.05e-18!63;CL:0000559!1.05e-18!63;CL:0000791!5.03e-18!18;CL:0000789!5.03e-18!18;CL:0002420!5.03e-18!18;CL:0002419!5.03e-18!18;CL:0000790!5.03e-18!18;CL:0002009!1.21e-17!65;CL:0000763!5.48e-17!112;CL:0000049!5.48e-17!112;CL:0000839!2.74e-15!70;CL:0000236!4.80e-15!14;CL:0000557!7.33e-15!71;CL:0000134!1.25e-13!358;CL:0002320!1.23e-12!365;CL:0000625!6.98e-12!11;CL:0000219!7.48e-10!390;CL:0002393!1.46e-07!9;CL:0002397!1.46e-07!9;CL:0000624!8.38e-07!6|ontology_enrichment_celltype_v019=CL:0000542;1.97e-31;53!CL:0000791;1.01e-25;18!CL:0000789;1.01e-25;18!CL:0002419;1.01e-25;18!CL:0000945;1.55e-25;24!CL:0000084;4.06e-23;25!CL:0002087;1.15e-21;104!CL:0000236;6.56e-21;13!CL:0000625;1.02e-16;11!CL:0000738;4.60e-12;136!CL:0000576;1.34e-11;48!CL:0000988;5.37e-11;177!CL:0000624;3.07e-09;6!CL:0000860;3.75e-08;33!CL:0002057;3.75e-08;33!CL:0000766;6.13e-08;69!CL:0002393;1.43e-07;6!CL:0002397;1.43e-07;6|ontology_enrichment_celltype_v019_2=CL:0000738,1.28e-64,136;CL:0002087,5.52e-64,115;CL:0000988,4.61e-56,177;CL:0000037,6.72e-56,168;CL:0000542,2.66e-53,53;CL:0000051,2.66e-53,53;CL:0002031,1.45e-52,120;CL:0000838,8.97e-52,52;CL:0002032,3.53e-50,161;CL:0000837,3.53e-50,161;CL:0000791,1.01e-25,18;CL:0000789,1.01e-25,18;CL:0002420,1.01e-25,18;CL:0002419,1.01e-25,18;CL:0000790,1.01e-25,18;CL:0000945,1.31e-25,24;CL:0000826,1.31e-25,24;CL:0000084,4.33e-23,25;CL:0000827,4.33e-23,25;CL:0000236,3.84e-19,14;CL:0000625,1.07e-16,11;CL:0000860,5.89e-16,42;CL:0002057,5.89e-16,42;CL:0000766,6.79e-15,72;CL:0002194,2.77e-13,59;CL:0000576,2.77e-13,59;CL:0000040,2.77e-13,59;CL:0000559,2.77e-13,59;CL:0000473,5.43e-13,48;CL:0000234,5.43e-13,48;CL:0000134,7.65e-13,354;CL:0002009,1.42e-12,61;CL:0002320,4.06e-12,361;CL:0000839,5.35e-11,66;CL:0000763,7.08e-11,108;CL:0000049,7.08e-11,108;CL:0000557,1.03e-10,67;CL:0002393,2.30e-10,9;CL:0002397,2.30e-10,9;CL:0000219,1.29e-09,386;CL:0000624,2.94e-09,6|ontology_enrichment_development_v019=CL:0000051;1.97e-31;53!CL:0000790;1.01e-25;18!CL:0002057;3.72e-11;42|ontology_enrichment_disease=DOID:2531!3.97e-11!51;DOID:0060083!3.97e-11!51;DOID:0060058!1.09e-08!10|ontology_enrichment_disease_v019=DOID:0060058;2.34e-08;10|ontology_enrichment_disease_v019_2=DOID:2531,1.85e-08,51;DOID:0060083,1.85e-08,51;DOID:0060058,2.11e-08,10|ontology_enrichment_uberon=UBERON:0002390!4.02e-27!102;UBERON:0003061!4.02e-27!102;UBERON:0002193!1.09e-24!112;UBERON:0000178!2.42e-13!15;UBERON:0000179!2.42e-13!15;UBERON:0000463!2.42e-13!15;UBERON:0002371!3.02e-13!80;UBERON:0001474!1.83e-12!86;UBERON:0002405!8.01e-12!115;UBERON:0002384!1.12e-11!375;UBERON:0004765!1.66e-09!101;UBERON:0001434!1.66e-09!101;UBERON:0004177!6.25e-07!7|ontology_enrichment_uberon_v019=UBERON:0000178;7.97e-19;15!UBERON:0000179;7.97e-19;15!UBERON:0000463;7.97e-19;15!UBERON:0002390;2.49e-12;32!UBERON:0002193;1.80e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.01e-25,98;UBERON:0003061,3.01e-25,98;UBERON:0002193,7.77e-24,108;UBERON:0000178,7.73e-19,15;UBERON:0000179,7.73e-19,15;UBERON:0000463,7.73e-19,15;UBERON:0002405,1.44e-12,93;UBERON:0002384,3.87e-11,371;UBERON:0002371,1.85e-09,76;UBERON:0001474,3.47e-08,82;UBERON:0004177,1.37e-07,7;UBERON:0005057,1.37e-07,7;UBERON:0004765,8.70e-07,90|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91033514369878,2.21671591514854,3.22714203386085,1.57345710739562,15.3531759238885,3.09632246632152,0,0,0,22.2330865665466,2.55904618477359,0.587200878669695,3.87796785972314,5.21415563422368,7.16135873362311,0.223915474239924,3.2389366601898,0.257575567634187,0.145398238779565,1.13362783106643,1.21292030593908,0.929716147622738,0.411167888021826,1.54853185447552,1.43846196161075,0.512321413058201,0.945928919554341,0.344745680736619,2.5819387343353,1.35426486594342,0.941211697713023,2.72906150057846,2.02251136000576,1.53041946185451,3.20929027076094,3.19668562899521,0.659702600373432,0.598390972864896,0,2.32167390902867,1.70215567407342,0,0.75374599577023,1.5644487552606,0.868755378820466,1.21079900526674,1.84138817993782,1.58231193720442,4.01385043992689,5.95292039902122,1.04829322754188,3.03287304095537,1.50176892841506,1.44653028027372,2.28010194992999,4.37616689837998,3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2841 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4472 | |||
|TSSclassifier=S | |||
|UniProt=Q5JUH9 | |||
|association_with_transcript=0bp_to_ENST00000416594_5end | |||
|coexpression_cluster_id=C3320 | |||
|description=CAGE_peak_1_at_GPR18_5end | |||
|id=chr13:99910620..99910660,- | |||
|ontology_enrichment_celltype=CL:0000738!1.48e-65!140;CL:0002087!1.56e-64!119;CL:0000037!7.40e-61!172;CL:0000566!7.40e-61!172;CL:0000988!4.12e-59!182;CL:0002032!2.58e-55!165;CL:0000837!2.58e-55!165;CL:0002031!2.14e-53!124;CL:0000542!4.26e-45!53;CL:0000051!4.26e-45!53;CL:0000838!5.08e-44!52;CL:0000945!3.09e-22!24;CL:0000826!3.09e-22!24;CL:0002057!1.73e-21!42;CL:0000084!5.10e-20!25;CL:0000827!5.10e-20!25;CL:0000766!1.49e-19!76;CL:0000860!3.89e-19!45;CL:0002194!1.05e-18!63;CL:0000576!1.05e-18!63;CL:0000040!1.05e-18!63;CL:0000559!1.05e-18!63;CL:0000791!5.03e-18!18;CL:0000789!5.03e-18!18;CL:0002420!5.03e-18!18;CL:0002419!5.03e-18!18;CL:0000790!5.03e-18!18;CL:0002009!1.21e-17!65;CL:0000763!5.48e-17!112;CL:0000049!5.48e-17!112;CL:0000839!2.74e-15!70;CL:0000236!4.80e-15!14;CL:0000557!7.33e-15!71;CL:0000134!1.25e-13!358;CL:0002320!1.23e-12!365;CL:0000625!6.98e-12!11;CL:0000219!7.48e-10!390;CL:0002393!1.46e-07!9;CL:0002397!1.46e-07!9;CL:0000624!8.38e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.97e-31;53!CL:0000791;1.01e-25;18!CL:0000789;1.01e-25;18!CL:0002419;1.01e-25;18!CL:0000945;1.55e-25;24!CL:0000084;4.06e-23;25!CL:0002087;1.15e-21;104!CL:0000236;6.56e-21;13!CL:0000625;1.02e-16;11!CL:0000738;4.60e-12;136!CL:0000576;1.34e-11;48!CL:0000988;5.37e-11;177!CL:0000624;3.07e-09;6!CL:0000860;3.75e-08;33!CL:0002057;3.75e-08;33!CL:0000766;6.13e-08;69!CL:0002393;1.43e-07;6!CL:0002397;1.43e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.28e-64,136;CL:0002087,5.52e-64,115;CL:0000988,4.61e-56,177;CL:0000037,6.72e-56,168;CL:0000542,2.66e-53,53;CL:0000051,2.66e-53,53;CL:0002031,1.45e-52,120;CL:0000838,8.97e-52,52;CL:0002032,3.53e-50,161;CL:0000837,3.53e-50,161;CL:0000791,1.01e-25,18;CL:0000789,1.01e-25,18;CL:0002420,1.01e-25,18;CL:0002419,1.01e-25,18;CL:0000790,1.01e-25,18;CL:0000945,1.31e-25,24;CL:0000826,1.31e-25,24;CL:0000084,4.33e-23,25;CL:0000827,4.33e-23,25;CL:0000236,3.84e-19,14;CL:0000625,1.07e-16,11;CL:0000860,5.89e-16,42;CL:0002057,5.89e-16,42;CL:0000766,6.79e-15,72;CL:0002194,2.77e-13,59;CL:0000576,2.77e-13,59;CL:0000040,2.77e-13,59;CL:0000559,2.77e-13,59;CL:0000473,5.43e-13,48;CL:0000234,5.43e-13,48;CL:0000134,7.65e-13,354;CL:0002009,1.42e-12,61;CL:0002320,4.06e-12,361;CL:0000839,5.35e-11,66;CL:0000763,7.08e-11,108;CL:0000049,7.08e-11,108;CL:0000557,1.03e-10,67;CL:0002393,2.30e-10,9;CL:0002397,2.30e-10,9;CL:0000219,1.29e-09,386;CL:0000624,2.94e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000051;1.97e-31;53!CL:0000790;1.01e-25;18!CL:0002057;3.72e-11;42 | |||
|ontology_enrichment_disease=DOID:2531!3.97e-11!51;DOID:0060083!3.97e-11!51;DOID:0060058!1.09e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.34e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.85e-08,51;DOID:0060083,1.85e-08,51;DOID:0060058,2.11e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.02e-27!102;UBERON:0003061!4.02e-27!102;UBERON:0002193!1.09e-24!112;UBERON:0000178!2.42e-13!15;UBERON:0000179!2.42e-13!15;UBERON:0000463!2.42e-13!15;UBERON:0002371!3.02e-13!80;UBERON:0001474!1.83e-12!86;UBERON:0002405!8.01e-12!115;UBERON:0002384!1.12e-11!375;UBERON:0004765!1.66e-09!101;UBERON:0001434!1.66e-09!101;UBERON:0004177!6.25e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.97e-19;15!UBERON:0000179;7.97e-19;15!UBERON:0000463;7.97e-19;15!UBERON:0002390;2.49e-12;32!UBERON:0002193;1.80e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.01e-25,98;UBERON:0003061,3.01e-25,98;UBERON:0002193,7.77e-24,108;UBERON:0000178,7.73e-19,15;UBERON:0000179,7.73e-19,15;UBERON:0000463,7.73e-19,15;UBERON:0002405,1.44e-12,93;UBERON:0002384,3.87e-11,371;UBERON:0002371,1.85e-09,76;UBERON:0001474,3.47e-08,82;UBERON:0004177,1.37e-07,7;UBERON:0005057,1.37e-07,7;UBERON:0004765,8.70e-07,90 | |||
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| |||
|short_description=p1@GPR18 | |||
}} |
Revision as of 03:06, 11 September 2013
Short description: | p1@GPR18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GPR18_5end |
Coexpression cluster: | C3320_lymphoma_CD19_CD4_myeloma_Burkitt_CD8_hereditary |
Association with transcript: | 0bp_to_ENST00000416594_5end |
EntrezGene: | GPR18 |
HGNC: | 4472 |
UniProt: | Q5JUH9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.01e-25 | 98 |
blood island | 3.01e-25 | 98 |
hemolymphoid system | 7.77e-24 | 108 |
blood | 7.73e-19 | 15 |
haemolymphatic fluid | 7.73e-19 | 15 |
organism substance | 7.73e-19 | 15 |
immune system | 1.44e-12 | 93 |
connective tissue | 3.87e-11 | 371 |
bone marrow | 1.85e-09 | 76 |
bone element | 3.47e-08 | 82 |
hemopoietic organ | 1.37e-07 | 7 |
immune organ | 1.37e-07 | 7 |
skeletal element | 8.70e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.85e-08 | 51 |
immune system cancer | 1.85e-08 | 51 |
lymphoma | 2.11e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.