FFCP PHASE1:Hg19::chr3:98451093..98451116,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10402 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18080 | |||
|TSSclassifier=S | |||
|UniProt=C9JWI9,F2Z2F4,Q9Y274 | |||
|association_with_transcript=0bp_to_ENST00000460774,ENST00000469105,ENST00000483910_5end | |||
|description=CAGE_peak_2_at_ST3GAL6_5end | |||
|id=chr3:98451093..98451116,+ | |||
|ontology_enrichment_celltype=CL:0000557!1.97e-17!71;CL:0002009!2.48e-16!65;CL:0000839!1.30e-15!70;CL:0002194!1.58e-15!63;CL:0000576!1.58e-15!63;CL:0000040!1.58e-15!63;CL:0000559!1.58e-15!63;CL:0002057!2.05e-14!42;CL:0000766!2.15e-13!76;CL:0000860!5.98e-12!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.68e-19;33!CL:0002057;8.68e-19;33!CL:0000473;1.42e-17;39!CL:0000234;1.42e-17;39!CL:0000576;3.34e-11;48!CL:0000766;1.40e-08;69!CL:0000148;2.20e-07;10!CL:0000147;4.86e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.97e-21,67;CL:0002009,1.14e-20,61;CL:0002194,1.21e-19,59;CL:0000576,1.21e-19,59;CL:0000040,1.21e-19,59;CL:0000559,1.21e-19,59;CL:0000473,2.86e-19,48;CL:0000234,2.86e-19,48;CL:0000839,7.00e-19,66;CL:0000860,1.73e-16,42;CL:0002057,1.73e-16,42;CL:0000766,2.58e-16,72;CL:0000763,2.63e-09,108;CL:0000049,2.63e-09,108;CL:0000738,1.77e-07,136;CL:0002031,2.27e-07,120;CL:0000148,2.73e-07,10;CL:0000541,2.73e-07,10;CL:0000147,5.33e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.05e-14!115;UBERON:0007023!3.32e-14!115;UBERON:0002371!5.90e-13!80;UBERON:0002193!1.03e-12!112;UBERON:0002390!2.86e-12!102;UBERON:0003061!2.86e-12!102;UBERON:0001474!1.86e-11!86;UBERON:0000073!2.82e-10!94;UBERON:0001016!2.82e-10!94;UBERON:0001049!2.83e-10!57;UBERON:0005068!2.83e-10!57;UBERON:0006241!2.83e-10!57;UBERON:0007135!2.83e-10!57;UBERON:0003081!3.71e-10!216;UBERON:0000922!7.45e-10!612;UBERON:0005743!9.92e-10!86;UBERON:0000468!2.60e-09!659;UBERON:0000923!3.61e-09!604;UBERON:0005291!3.61e-09!604;UBERON:0006598!3.61e-09!604;UBERON:0002532!3.61e-09!604;UBERON:0002050!5.74e-09!605;UBERON:0005423!5.74e-09!605;UBERON:0001017!6.89e-09!82;UBERON:0002616!8.42e-09!59;UBERON:0000467!3.75e-08!625;UBERON:0000955!4.32e-08!69;UBERON:0006238!4.32e-08!69;UBERON:0000480!5.83e-08!626;UBERON:0000025!1.06e-07!194;UBERON:0004765!1.98e-07!101;UBERON:0001434!1.98e-07!101;UBERON:0002780!2.85e-07!41;UBERON:0001890!2.85e-07!41;UBERON:0006240!2.85e-07!41;UBERON:0003080!3.19e-07!42;UBERON:0003075!6.41e-07!86;UBERON:0007284!6.41e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;8.10e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.70e-17,76;UBERON:0002405,9.04e-17,93;UBERON:0002193,1.21e-15,108;UBERON:0002390,1.57e-15,98;UBERON:0003061,1.57e-15,98;UBERON:0001474,7.69e-15,82;UBERON:0004765,7.96e-13,90;UBERON:0007023,1.11e-12,114;UBERON:0001049,2.62e-11,56;UBERON:0005068,2.62e-11,56;UBERON:0006241,2.62e-11,56;UBERON:0007135,2.62e-11,56;UBERON:0000073,8.10e-11,53;UBERON:0002616,8.10e-11,53;UBERON:0001434,3.75e-10,100;UBERON:0003081,7.50e-10,203;UBERON:0001016,2.31e-09,89;UBERON:0001017,1.10e-08,81;UBERON:0003075,1.20e-08,82;UBERON:0007284,1.20e-08,82;UBERON:0000955,1.57e-08,68;UBERON:0006238,1.57e-08,68;UBERON:0002346,2.24e-08,86;UBERON:0002780,3.30e-08,41;UBERON:0001890,3.30e-08,41;UBERON:0003080,3.30e-08,41;UBERON:0006240,3.30e-08,41;UBERON:0003528,3.21e-07,34;UBERON:0002020,3.21e-07,34;UBERON:0001893,6.03e-07,34;UBERON:0001950,6.32e-07,20;UBERON:0002619,9.26e-07,22 | |||
|phase1_expression=0.908391896352783,0.428201047781966,0.704772020479856,1.0007329835313,0.446961094427288,0,2.53299878168311,0,0,0.737201809504527,0,0.873765488520689,0.791300934685361,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0.286235987131057,0.273748850145768,0.251085279189606,3.89708369314551,2.21671591514854,2.67616656466509,1.57345710739562,0.767658796194425,0.928896739896456,0,1.204823675113,0.739508020333575,0,0,1.76160263600908,8.30993112797816,12.6343001906189,9.54847831149748,2.68698569087909,4.21061765824673,2.31818010870768,7.85150489409649,12.4699061417307,6.54976965207104,18.1294648786434,34.1269347058115,37.4744708783075,8.05538698502021,8.70946402198942,9.22280696565482,29.3033828626126,28.4013260776883,40.6279459783025,8.28266293987461,13.0994952027766,12.3597916444797,8.57034898638527,17.9720255162612,17.2621023965741,0.329851300186716,1.79517291859469,1.27867425159808,16.2517173632007,38.0148100543064,28.6498234537965,7.78870862295904,10.9511412868242,12.8141418376019,15.7403870684676,27.2525450630798,25.0005286078299,0,0.850417199860174,0.628975936525128,1.01095768031846,1.20141514273205,0.803627933485401,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,2.80254281490768,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.767175371061182,0,0,0.144846518960824,0,0,0,0,0,1.57174890597255,0,0.370784442784429,8.43823223502177,6.26867054277362,7.57860374957531,0.715471872916026,0.571994910780128,0.74291500265913,2.18638648103376,2.58070378531837,0.347140501607594,4.52246353539208,6.29249154314859,2.75118041940067,1.8809546988313,1.55050055501597,1.42306505074684,5.35552980423472,2.01414658554573,5.32190474002959,0.488124115096339,0.367663080345869,2.43042584364528,3.03619076165871,2.02076435363553,0.675668882899933,0,0,1.28241220751285,0,0,0.872188104285069,0.496971951695318,0.759783069987479,2.1185468930115,0.573673241497627,0.709336764396714,0.560677600142307,0,3.94668077467456,3.7345324247972,3.23305612967251,2.7788523529288,0.151357427644931,0,0,0,0,0,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7223723958405,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.201504196455281,0,1.15956511897978,1.09098448236334,0.286804595389004,1.21973706129595,1.32529768321485,2.20768491452085,1.96956004529204,1.00928340350251,0.36497735907583,0,0,0,0,0,0,0.337169380156203,0,0.220587945464788,0.217879444092406,0,0.269662616320329,0,0.38474715694639,0.738155454624648,0,0,0,1.26755034821831,0.982827216677626,3.54473944008842,3.97316789473185,6.27241036569879,0.171567810298526,0.219500570817251,0,0,0,0.651616610620649,0,0,0,1.76113041353732,1.58803092537181,4.62985512576611,1.52203321787679,0,0,2.21595305478658,7.48813648445561,3.26988557035202,1.87467667973554,0.839910640994298,0.141775097242386,0.268675568108545,0.290633938513962,0.383382679165211,0.985326475791887,0.176096868026452,10.1590776614978,4.90007841617669,7.95327330586194,16.6364483045483,16.4255022990059,14.0660936652056,8.55362230113526,22.7248758874345,34.8397947098944,28.2968168304272,0,0,0,5.17086863031111,3.57656445851882,0,0,0,0,0,0,1.71573592389777,1.62786481617433,0.823240336780769,0,2.84313558994037,1.58390374586686,0,1.74306691720059,0.299918973546171,4.86495122564762,2.51128545716063,4.21667878966063,0,0,0,0.579125226670317,1.43833425785268,0.179060963239896,0,0.197030760201927,0,0.385029108839245,1.52456774533478,0,0,3.68535783735567,2.55175500661265,0,0,0,0,0.500170521059677,1.35632511849868,1.03985430765404,0.535286966391485,0.630809660135739,1.05427273493442,0.601892199455438,2.27407504055985,1.03473071292505,0,0,0,0,0,0.206768026122887,2.15714200818617,1.921096040462,0.303127571446259,0,0.604780586659361,1.73675465473144,1.07423381301644,0.280660094433074,1.40953064181271,0,0.965123526861645,1.48418066444991,0.154209693802656,0.177561725313127,0,1.03850885836724,0.116210378459959,7.37242642508896,1.40354529212299,0.736647911487171,0.229628896329213,0,0.524497659837696,0.902399225814824,1.61732207919271,2.35304930753057,0,0.949964660035881,0,0.680374821106063,0.215915916102139,0,0,0,0.764628819135115,0,0.447749509444357,0.438519753291869,0,1.28225062558195,4.26419039409617,1.62689197332152,6.38854272215878,0.54941678891006,0.660075999364704,0.574265537996172,0,0,0.096670718292122,0,0.15350367472613,0,0.214840489736547,0.290033387828457,0.340906509664404,0,2.14870389969272,0.768760269460425,1.27612712494584,0.6069466851333,0,0.62962469366128,0.6970372701606,2.7723022215848,0.532306030317022,0,0.37064843820784,0.286249773483982,0,1.89827654831236,2.85945290885737,0,0.42793898803392,0,0,1.43897966066652,1.09814811894422,0.589062011728432,0.606547444719948,4.75530963519025,0.421258456238981,0.975267478179181,0.243713489631284,1.05650146756755,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0.578775534266688,0,0.811641507850816,0.30982349809975,0.845086807596724,1.14729081763241,1.964980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| |||
|short_description=p2@ST3GAL6 | |||
}} |
Revision as of 01:38, 13 September 2013
Short description: | p2@ST3GAL6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ST3GAL6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000460774, ENST00000469105, ENST00000483910_5end |
EntrezGene: | ST3GAL6 |
HGNC: | 18080 |
UniProt: | C9JWI9F2Z2F4Q9Y274 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 2.97e-21 | 67 |
macrophage dendritic cell progenitor | 1.14e-20 | 61 |
monopoietic cell | 1.21e-19 | 59 |
monocyte | 1.21e-19 | 59 |
monoblast | 1.21e-19 | 59 |
promonocyte | 1.21e-19 | 59 |
defensive cell | 2.86e-19 | 48 |
phagocyte | 2.86e-19 | 48 |
myeloid lineage restricted progenitor cell | 7.00e-19 | 66 |
classical monocyte | 1.73e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.73e-16 | 42 |
myeloid leukocyte | 2.58e-16 | 72 |
myeloid cell | 2.63e-09 | 108 |
common myeloid progenitor | 2.63e-09 | 108 |
leukocyte | 1.77e-07 | 136 |
hematopoietic lineage restricted progenitor cell | 2.27e-07 | 120 |
melanocyte | 2.73e-07 | 10 |
melanoblast | 2.73e-07 | 10 |
pigment cell | 5.33e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.70e-17 | 76 |
immune system | 9.04e-17 | 93 |
hemolymphoid system | 1.21e-15 | 108 |
hematopoietic system | 1.57e-15 | 98 |
blood island | 1.57e-15 | 98 |
bone element | 7.69e-15 | 82 |
skeletal element | 7.96e-13 | 90 |
adult organism | 1.11e-12 | 114 |
neural tube | 2.62e-11 | 56 |
neural rod | 2.62e-11 | 56 |
future spinal cord | 2.62e-11 | 56 |
neural keel | 2.62e-11 | 56 |
regional part of nervous system | 8.10e-11 | 53 |
regional part of brain | 8.10e-11 | 53 |
skeletal system | 3.75e-10 | 100 |
lateral plate mesoderm | 7.50e-10 | 203 |
nervous system | 2.31e-09 | 89 |
central nervous system | 1.10e-08 | 81 |
neural plate | 1.20e-08 | 82 |
presumptive neural plate | 1.20e-08 | 82 |
brain | 1.57e-08 | 68 |
future brain | 1.57e-08 | 68 |
neurectoderm | 2.24e-08 | 86 |
regional part of forebrain | 3.30e-08 | 41 |
forebrain | 3.30e-08 | 41 |
anterior neural tube | 3.30e-08 | 41 |
future forebrain | 3.30e-08 | 41 |
brain grey matter | 3.21e-07 | 34 |
gray matter | 3.21e-07 | 34 |
telencephalon | 6.03e-07 | 34 |
neocortex | 6.32e-07 | 20 |
regional part of cerebral cortex | 9.26e-07 | 22 |
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