FFCP PHASE1:Hg19::chr3:117985764..117985778,+: Difference between revisions
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{{FFCP | 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9,1.5849330247695,53.0891646494074,2.36124455769368,1.1598144313382,0.971421986118279,1.40363678077263,0.198950775161368,1.42704108933082,0.79062257427272,0.769583617218004,0.452888530700021,0.385870790539723,0.218559560503957,1.41095188908457,1.22574160876953,2.35676547101626,2.94462700672418,0.891139200981258,1.2679671827502,4.92788632594669,2.06764619555678,0.580120991762195,0.0999411559249289,2.85686301769052,3.88184358887261,0.802413666891683,6.57302749421866,10.5507735183044,0.860037498908708,1.57771562193185,1.15585533324555,0.872701380680755,4.2322147241232,1.48798007266701,0.462175628631418,0.432626562123789,1.00933139868063,1.20192129160065,0.506794004045748,0.917899467677836,1.60330443159336,1.74600309116205,1.75495277504663,0.909344378618873,0.535928260312357,0.829169439458779,0.827463966895162,2.13233981900981,0.23806443146374,0.710478008196067,0.434523000071005,0.672791175483681,0.891060215894309,1.21270313374932,3.26575121845442,0.684466602170562,0.740872583160463,0.573777643141411,0,0.651226148887796,0.320182037633146,9.653614114347,0.628776414746108,0,1.4668973301944,0.406896178315738,5.99181096766961,1.81146414231924,0.320568492303233|short_description=p@chr3:117985764..117985778,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C438 | |||
|description=CAGE_peak_at_chr3:117985764..117985778,+ | |||
|id=chr3:117985764..117985778,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.30e-10!65;CL:0000557!6.42e-10!71;CL:0000839!7.90e-10!70;CL:0002194!9.51e-10!63;CL:0000576!9.51e-10!63;CL:0000040!9.51e-10!63;CL:0000559!9.51e-10!63;CL:0002057!2.68e-09!42;CL:0000766!3.23e-09!76;CL:0000763!9.92e-09!112;CL:0000049!9.92e-09!112;CL:0000860!5.65e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.24e-13;33!CL:0002057;2.24e-13;33!CL:0000473;2.11e-12;39!CL:0000234;2.11e-12;39!CL:0000359;6.85e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,5.03e-12,61;CL:0000557,2.95e-11,67;CL:0002194,5.05e-11,59;CL:0000576,5.05e-11,59;CL:0000040,5.05e-11,59;CL:0000559,5.05e-11,59;CL:0000473,5.81e-11,48;CL:0000234,5.81e-11,48;CL:0000839,6.83e-11,66;CL:0000766,1.88e-10,72;CL:0000763,1.57e-09,108;CL:0000049,1.57e-09,108;CL:0000860,1.64e-09,42;CL:0002057,1.64e-09,42;CL:0000359,6.55e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002057;1.67e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!7.45e-12!167;UBERON:0003081!6.48e-11!216;UBERON:0002371!1.15e-09!80;UBERON:0001474!1.49e-09!86;UBERON:0004765!4.25e-08!101;UBERON:0001434!4.25e-08!101;UBERON:0000926!4.93e-08!448;UBERON:0004120!4.93e-08!448;UBERON:0006603!4.93e-08!448;UBERON:0002390!2.64e-07!102;UBERON:0003061!2.64e-07!102;UBERON:0002193!2.82e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.01e-12,203;UBERON:0002371,4.30e-11,76;UBERON:0002204,6.15e-11,167;UBERON:0001474,7.50e-11,82;UBERON:0002405,1.15e-08,93;UBERON:0004765,1.27e-08,90;UBERON:0002390,1.23e-07,98;UBERON:0003061,1.23e-07,98;UBERON:0001434,1.25e-07,100;UBERON:0002193,1.56e-07,108;UBERON:0000926,2.72e-07,315;UBERON:0004120,2.72e-07,315;UBERON:0006603,2.72e-07,315 | |||
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| |||
|short_description=p@chr3:117985764..117985778,+ | |||
}} |
Revision as of 20:58, 12 September 2013
Short description: | p@chr3:117985764..117985778, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:117985764..117985778, + |
Coexpression cluster: | C438_skeletal_salivary_tridermal_mixed_seminal_Neutrophils_Melanocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 5.03e-12 | 61 |
granulocyte monocyte progenitor cell | 2.95e-11 | 67 |
monopoietic cell | 5.05e-11 | 59 |
monocyte | 5.05e-11 | 59 |
monoblast | 5.05e-11 | 59 |
promonocyte | 5.05e-11 | 59 |
defensive cell | 5.81e-11 | 48 |
phagocyte | 5.81e-11 | 48 |
myeloid lineage restricted progenitor cell | 6.83e-11 | 66 |
myeloid leukocyte | 1.88e-10 | 72 |
myeloid cell | 1.57e-09 | 108 |
common myeloid progenitor | 1.57e-09 | 108 |
classical monocyte | 1.64e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.64e-09 | 42 |
vascular associated smooth muscle cell | 6.55e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.01e-12 | 203 |
bone marrow | 4.30e-11 | 76 |
musculoskeletal system | 6.15e-11 | 167 |
bone element | 7.50e-11 | 82 |
immune system | 1.15e-08 | 93 |
skeletal element | 1.27e-08 | 90 |
hematopoietic system | 1.23e-07 | 98 |
blood island | 1.23e-07 | 98 |
skeletal system | 1.25e-07 | 100 |
hemolymphoid system | 1.56e-07 | 108 |
mesoderm | 2.72e-07 | 315 |
mesoderm-derived structure | 2.72e-07 | 315 |
presumptive mesoderm | 2.72e-07 | 315 |
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