FFCP PHASE1:Hg19::chr3:179754432..179754435,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51555|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30024|TSSclassifier=S|UniProt=Q8IYB4|association_with_transcript=81bp_to_NM_016559,uc003fki.1,uc003fkj.1,uc010hxd.1,uc011bqg.1,uc011bqh.1_5end|description=CAGE_peak_10_at_PEX5L_5end|id=chr3:179754432..179754435,-|ontology_enrichment_celltype=CL:0000242!2.33e-09!2|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005425;3.81e-21;1!UBERON:0003056;6.13e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.01e-57!57;UBERON:0005068!8.01e-57!57;UBERON:0006241!8.01e-57!57;UBERON:0007135!8.01e-57!57;UBERON:0000073!3.30e-47!94;UBERON:0001016!3.30e-47!94;UBERON:0002020!5.78e-47!34;UBERON:0003528!5.78e-47!34;UBERON:0002616!6.54e-47!59;UBERON:0001893!8.14e-47!34;UBERON:0002780!4.38e-46!41;UBERON:0001890!4.38e-46!41;UBERON:0006240!4.38e-46!41;UBERON:0001017!4.92e-46!82;UBERON:0000955!4.44e-45!69;UBERON:0006238!4.44e-45!69;UBERON:0003080!7.00e-45!42;UBERON:0005743!1.37e-43!86;UBERON:0002791!1.41e-43!33;UBERON:0002619!7.65e-43!22;UBERON:0001950!1.26e-41!20;UBERON:0001869!8.13e-41!32;UBERON:0003075!2.64e-38!86;UBERON:0007284!2.64e-38!86;UBERON:0000956!1.87e-37!25;UBERON:0000203!1.87e-37!25;UBERON:0002346!2.69e-36!90;UBERON:0003056!2.15e-29!61;UBERON:0007023!3.63e-27!115;UBERON:0004121!2.28e-26!169;UBERON:0000924!1.42e-25!173;UBERON:0006601!1.42e-25!173;UBERON:0000033!2.13e-24!123;UBERON:0000153!6.03e-23!129;UBERON:0007811!6.03e-23!129;UBERON:0002021!1.12e-21!5;UBERON:0001871!1.08e-18!7;UBERON:0000200!1.45e-17!6;UBERON:0000025!3.52e-14!194;UBERON:0002771!6.78e-14!3;UBERON:0006331!8.06e-13!3;UBERON:0003076!9.60e-13!15;UBERON:0003057!9.60e-13!15;UBERON:0002298!1.47e-12!8;UBERON:0004732!5.04e-11!13;UBERON:0002308!6.45e-11!9;UBERON:0000125!6.45e-11!9;UBERON:0004111!5.10e-10!241;UBERON:0005162!2.87e-09!2;UBERON:0000122!2.87e-09!2;UBERON:0002148!2.99e-09!2;UBERON:0009662!2.99e-09!2;UBERON:0000483!2.08e-08!309;UBERON:0004733!2.22e-08!12;UBERON:0002028!2.22e-08!12;UBERON:0007277!2.22e-08!12;UBERON:0000119!2.97e-08!312;UBERON:0000064!3.59e-08!219;UBERON:0000477!4.24e-08!286;UBERON:0002420!2.84e-07!9;UBERON:0007245!2.84e-07!9;UBERON:0010009!2.84e-07!9;UBERON:0010011!2.84e-07!9;UBERON:0000454!2.84e-07!9;UBERON:0000475!3.25e-07!365|ontology_enrichment_uberon_v019=UBERON:0002021;3.44e-36;5!UBERON:0000941;3.81e-21;1!UBERON:0001785;3.81e-21;1!UBERON:0002464;3.81e-21;1!UBERON:0004904;3.81e-21;1!UBERON:0001021;3.81e-21;1!UBERON:0001950;1.71e-15;20!UBERON:0002619;3.49e-14;22!UBERON:0000956;1.36e-12;25!UBERON:0000203;1.36e-12;25!UBERON:0002771;2.87e-11;2!UBERON:0002360;2.87e-11;2!UBERON:0003714;2.87e-11;2!UBERON:0005162;2.87e-11;2!UBERON:0000122;2.87e-11;2!UBERON:0000094;2.87e-11;2!UBERON:0010743;2.87e-11;2!UBERON:0002791;4.36e-10;32!UBERON:0001869;4.36e-10;32!UBERON:0001893;5.04e-08;34!UBERON:0003528;2.09e-07;34!UBERON:0002020;2.09e-07;34|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.66e-36,5;UBERON:0000941,5.16e-21,1;UBERON:0001785,5.16e-21,1;UBERON:0002464,5.16e-21,1;UBERON:0004904,5.16e-21,1;UBERON:0001021,5.16e-21,1;UBERON:0003902,5.16e-21,1;UBERON:0005425,5.16e-21,1;UBERON:0001950,1.47e-15,20;UBERON:0002619,3.05e-14,22;UBERON:0000956,1.21e-12,25;UBERON:0000203,1.21e-12,25;UBERON:0002771,1.82e-11,2;UBERON:0003714,3.35e-11,2;UBERON:0005162,3.35e-11,2;UBERON:0000122,3.35e-11,2;UBERON:0002360,4.52e-11,2;UBERON:0000094,4.52e-11,2;UBERON:0010743,4.52e-11,2;UBERON:0001016,2.64e-10,89;UBERON:0002791,4.86e-10,32;UBERON:0001869,4.86e-10,32;UBERON:0003528,1.74e-09,34;UBERON:0002020,1.74e-09,34;UBERON:0001893,1.74e-09,34;UBERON:0001017,1.66e-08,81;UBERON:0003056,3.84e-08,61;UBERON:0002780,5.91e-08,41;UBERON:0001890,5.91e-08,41;UBERON:0003080,5.91e-08,41;UBERON:0006240,5.91e-08,41;UBERON:0000955,3.33e-07,68;UBERON:0006238,3.33e-07,68|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51555 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30024 | |||
|TSSclassifier=S | |||
|UniProt=Q8IYB4 | |||
|association_with_transcript=81bp_to_NM_016559,uc003fki.1,uc003fkj.1,uc010hxd.1,uc011bqg.1,uc011bqh.1_5end | |||
|description=CAGE_peak_10_at_PEX5L_5end | |||
|id=chr3:179754432..179754435,- | |||
|ontology_enrichment_celltype=CL:0000242!2.33e-09!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.81e-21;1!UBERON:0003056;6.13e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.01e-57!57;UBERON:0005068!8.01e-57!57;UBERON:0006241!8.01e-57!57;UBERON:0007135!8.01e-57!57;UBERON:0000073!3.30e-47!94;UBERON:0001016!3.30e-47!94;UBERON:0002020!5.78e-47!34;UBERON:0003528!5.78e-47!34;UBERON:0002616!6.54e-47!59;UBERON:0001893!8.14e-47!34;UBERON:0002780!4.38e-46!41;UBERON:0001890!4.38e-46!41;UBERON:0006240!4.38e-46!41;UBERON:0001017!4.92e-46!82;UBERON:0000955!4.44e-45!69;UBERON:0006238!4.44e-45!69;UBERON:0003080!7.00e-45!42;UBERON:0005743!1.37e-43!86;UBERON:0002791!1.41e-43!33;UBERON:0002619!7.65e-43!22;UBERON:0001950!1.26e-41!20;UBERON:0001869!8.13e-41!32;UBERON:0003075!2.64e-38!86;UBERON:0007284!2.64e-38!86;UBERON:0000956!1.87e-37!25;UBERON:0000203!1.87e-37!25;UBERON:0002346!2.69e-36!90;UBERON:0003056!2.15e-29!61;UBERON:0007023!3.63e-27!115;UBERON:0004121!2.28e-26!169;UBERON:0000924!1.42e-25!173;UBERON:0006601!1.42e-25!173;UBERON:0000033!2.13e-24!123;UBERON:0000153!6.03e-23!129;UBERON:0007811!6.03e-23!129;UBERON:0002021!1.12e-21!5;UBERON:0001871!1.08e-18!7;UBERON:0000200!1.45e-17!6;UBERON:0000025!3.52e-14!194;UBERON:0002771!6.78e-14!3;UBERON:0006331!8.06e-13!3;UBERON:0003076!9.60e-13!15;UBERON:0003057!9.60e-13!15;UBERON:0002298!1.47e-12!8;UBERON:0004732!5.04e-11!13;UBERON:0002308!6.45e-11!9;UBERON:0000125!6.45e-11!9;UBERON:0004111!5.10e-10!241;UBERON:0005162!2.87e-09!2;UBERON:0000122!2.87e-09!2;UBERON:0002148!2.99e-09!2;UBERON:0009662!2.99e-09!2;UBERON:0000483!2.08e-08!309;UBERON:0004733!2.22e-08!12;UBERON:0002028!2.22e-08!12;UBERON:0007277!2.22e-08!12;UBERON:0000119!2.97e-08!312;UBERON:0000064!3.59e-08!219;UBERON:0000477!4.24e-08!286;UBERON:0002420!2.84e-07!9;UBERON:0007245!2.84e-07!9;UBERON:0010009!2.84e-07!9;UBERON:0010011!2.84e-07!9;UBERON:0000454!2.84e-07!9;UBERON:0000475!3.25e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;3.44e-36;5!UBERON:0000941;3.81e-21;1!UBERON:0001785;3.81e-21;1!UBERON:0002464;3.81e-21;1!UBERON:0004904;3.81e-21;1!UBERON:0001021;3.81e-21;1!UBERON:0001950;1.71e-15;20!UBERON:0002619;3.49e-14;22!UBERON:0000956;1.36e-12;25!UBERON:0000203;1.36e-12;25!UBERON:0002771;2.87e-11;2!UBERON:0002360;2.87e-11;2!UBERON:0003714;2.87e-11;2!UBERON:0005162;2.87e-11;2!UBERON:0000122;2.87e-11;2!UBERON:0000094;2.87e-11;2!UBERON:0010743;2.87e-11;2!UBERON:0002791;4.36e-10;32!UBERON:0001869;4.36e-10;32!UBERON:0001893;5.04e-08;34!UBERON:0003528;2.09e-07;34!UBERON:0002020;2.09e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.66e-36,5;UBERON:0000941,5.16e-21,1;UBERON:0001785,5.16e-21,1;UBERON:0002464,5.16e-21,1;UBERON:0004904,5.16e-21,1;UBERON:0001021,5.16e-21,1;UBERON:0003902,5.16e-21,1;UBERON:0005425,5.16e-21,1;UBERON:0001950,1.47e-15,20;UBERON:0002619,3.05e-14,22;UBERON:0000956,1.21e-12,25;UBERON:0000203,1.21e-12,25;UBERON:0002771,1.82e-11,2;UBERON:0003714,3.35e-11,2;UBERON:0005162,3.35e-11,2;UBERON:0000122,3.35e-11,2;UBERON:0002360,4.52e-11,2;UBERON:0000094,4.52e-11,2;UBERON:0010743,4.52e-11,2;UBERON:0001016,2.64e-10,89;UBERON:0002791,4.86e-10,32;UBERON:0001869,4.86e-10,32;UBERON:0003528,1.74e-09,34;UBERON:0002020,1.74e-09,34;UBERON:0001893,1.74e-09,34;UBERON:0001017,1.66e-08,81;UBERON:0003056,3.84e-08,61;UBERON:0002780,5.91e-08,41;UBERON:0001890,5.91e-08,41;UBERON:0003080,5.91e-08,41;UBERON:0006240,5.91e-08,41;UBERON:0000955,3.33e-07,68;UBERON:0006238,3.33e-07,68 | |||
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|short_description=p10@PEX5L | |||
}} |
Revision as of 22:52, 12 September 2013
Short description: | p10@PEX5L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_PEX5L_5end |
Coexpression cluster: | NA |
Association with transcript: | 81bp_to_NM_016559, uc003fki.1, uc003fkj.1, uc010hxd.1, uc011bqg.1, uc011bqh.1_5end |
EntrezGene: | PEX5L |
HGNC: | 30024 |
UniProt: | Q8IYB4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.66e-36 | 5 |
cranial nerve II | 5.16e-21 | 1 |
cranial nerve | 5.16e-21 | 1 |
nerve trunk | 5.16e-21 | 1 |
nerve connecting eye with brain | 5.16e-21 | 1 |
nerve | 5.16e-21 | 1 |
retinal neural layer | 5.16e-21 | 1 |
presumptive neural retina | 5.16e-21 | 1 |
neocortex | 1.47e-15 | 20 |
regional part of cerebral cortex | 3.05e-14 | 22 |
cerebral cortex | 1.21e-12 | 25 |
pallium | 1.21e-12 | 25 |
middle temporal gyrus | 1.82e-11 | 2 |
neural tissue | 3.35e-11 | 2 |
multi cell component structure | 3.35e-11 | 2 |
neuron projection bundle | 3.35e-11 | 2 |
meninx | 4.52e-11 | 2 |
membrane organ | 4.52e-11 | 2 |
meningeal cluster | 4.52e-11 | 2 |
nervous system | 2.64e-10 | 89 |
regional part of telencephalon | 4.86e-10 | 32 |
cerebral hemisphere | 4.86e-10 | 32 |
brain grey matter | 1.74e-09 | 34 |
gray matter | 1.74e-09 | 34 |
telencephalon | 1.74e-09 | 34 |
central nervous system | 1.66e-08 | 81 |
pre-chordal neural plate | 3.84e-08 | 61 |
regional part of forebrain | 5.91e-08 | 41 |
forebrain | 5.91e-08 | 41 |
anterior neural tube | 5.91e-08 | 41 |
future forebrain | 5.91e-08 | 41 |
brain | 3.33e-07 | 68 |
future brain | 3.33e-07 | 68 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.