FFCP PHASE1:Hg19::chr3:179754789..179754804,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51555|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30024|TSSclassifier=S|UniProt=|association_with_transcript=18bp_to_ENST00000474909_5end|coexpression_cluster_id=C2733|description=CAGE_peak_6_at_PEX5L_5end|id=chr3:179754789..179754804,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000123;2.64e-08;2!CL:0000242;2.64e-08;2|ontology_enrichment_celltype_v019_2=CL:0000242,2.69e-08,2|ontology_enrichment_development_v019=UBERON:0006601;4.34e-18;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.80e-66!57;UBERON:0005068!4.80e-66!57;UBERON:0006241!4.80e-66!57;UBERON:0007135!4.80e-66!57;UBERON:0000073!3.14e-64!94;UBERON:0001016!3.14e-64!94;UBERON:0001017!9.65e-63!82;UBERON:0005743!1.54e-61!86;UBERON:0000955!2.48e-57!69;UBERON:0006238!2.48e-57!69;UBERON:0002780!8.62e-57!41;UBERON:0001890!8.62e-57!41;UBERON:0006240!8.62e-57!41;UBERON:0003080!3.31e-55!42;UBERON:0002616!1.26e-54!59;UBERON:0001893!6.90e-51!34;UBERON:0002020!1.07e-50!34;UBERON:0003528!1.07e-50!34;UBERON:0003075!7.15e-50!86;UBERON:0007284!7.15e-50!86;UBERON:0002346!4.50e-49!90;UBERON:0002791!9.89e-49!33;UBERON:0001869!2.32e-47!32;UBERON:0002619!4.98e-44!22;UBERON:0003056!1.32e-41!61;UBERON:0001950!8.20e-40!20;UBERON:0007023!6.19e-39!115;UBERON:0000956!4.04e-38!25;UBERON:0000203!4.04e-38!25;UBERON:0000924!2.97e-34!173;UBERON:0006601!2.97e-34!173;UBERON:0004121!3.94e-34!169;UBERON:0000033!8.57e-31!123;UBERON:0000153!5.05e-30!129;UBERON:0007811!5.05e-30!129;UBERON:0001871!9.03e-18!7;UBERON:0000200!2.39e-14!6;UBERON:0002420!3.78e-14!9;UBERON:0007245!3.78e-14!9;UBERON:0010009!3.78e-14!9;UBERON:0010011!3.78e-14!9;UBERON:0000454!3.78e-14!9;UBERON:0000025!8.07e-14!194;UBERON:0002308!8.98e-14!9;UBERON:0000125!8.98e-14!9;UBERON:0002298!1.43e-12!8;UBERON:0003076!3.99e-12!15;UBERON:0003057!3.99e-12!15;UBERON:0000349!5.95e-12!5;UBERON:0001872!6.64e-12!5;UBERON:0000483!1.51e-10!309;UBERON:0000119!2.66e-10!312;UBERON:0009663!3.31e-10!7;UBERON:0004732!2.21e-09!13;UBERON:0004111!2.82e-09!241;UBERON:0000475!8.28e-09!365;UBERON:0000369!1.33e-08!4;UBERON:0002435!1.33e-08!4;UBERON:0000204!1.33e-08!4;UBERON:0010082!1.33e-08!4;UBERON:0000064!4.08e-08!219;UBERON:0002771!4.79e-08!3;UBERON:0004733!8.05e-08!12;UBERON:0002028!8.05e-08!12;UBERON:0007277!8.05e-08!12;UBERON:0002021!1.58e-07!5;UBERON:0001894!1.68e-07!7;UBERON:0006222!1.68e-07!7;UBERON:0000988!2.68e-07!3;UBERON:0001896!3.32e-07!3;UBERON:0005290!3.32e-07!3;UBERON:0010096!3.32e-07!3;UBERON:0006331!5.07e-07!3;UBERON:0000477!5.95e-07!286;UBERON:0002240!9.62e-07!3|ontology_enrichment_uberon_v019=UBERON:0002619;1.44e-70;22!UBERON:0001950;3.25e-63;20!UBERON:0000956;8.54e-62;25!UBERON:0000203;8.54e-62;25!UBERON:0001869;7.23e-52;32!UBERON:0003528;1.69e-50;34!UBERON:0002020;1.69e-50;34!UBERON:0002791;1.19e-46;32!UBERON:0001893;1.64e-45;34!UBERON:0002780;2.76e-42;41!UBERON:0001890;2.76e-42;41!UBERON:0000073;4.02e-38;53!UBERON:0002616;4.02e-38;53!UBERON:0001871;2.02e-26;6!UBERON:0000955;1.81e-25;68!UBERON:0000200;6.21e-24;6!UBERON:0001017;1.05e-23;75!UBERON:0001016;5.57e-22;83!UBERON:0002298;2.78e-21;6!UBERON:0000349;8.13e-20;5!UBERON:0001872;1.80e-13;5!UBERON:0001870;6.65e-13;3!UBERON:0004732;7.15e-13;13!UBERON:0002021;2.09e-12;5!UBERON:0000988;1.65e-11;3!UBERON:0001896;1.65e-11;3!UBERON:0005290;1.65e-11;3!UBERON:0004733;2.34e-10;12!UBERON:0002028;2.34e-10;12!UBERON:0007023;2.21e-09;114!UBERON:0002771;3.43e-09;2!UBERON:0002702;3.71e-09;2!UBERON:0001876;5.63e-09;2!UBERON:0001954;5.63e-09;2!UBERON:0003022;5.63e-09;2!UBERON:0002421;5.63e-09;2!UBERON:0002600;5.63e-09;2!UBERON:0001894;1.89e-08;7!UBERON:0011216;2.36e-08;132!UBERON:0000007;2.64e-08;2!UBERON:0002148;4.37e-08;2!UBERON:0006331;4.37e-08;2!UBERON:0009662;4.37e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.39e-70,22;UBERON:0000073,1.38e-69,53;UBERON:0002616,1.38e-69,53;UBERON:0000955,1.43e-66,68;UBERON:0006238,1.43e-66,68;UBERON:0001049,1.69e-65,56;UBERON:0005068,1.69e-65,56;UBERON:0006241,1.69e-65,56;UBERON:0007135,1.69e-65,56;UBERON:0001950,5.85e-63,20;UBERON:0000956,1.33e-61,25;UBERON:0000203,1.33e-61,25;UBERON:0001016,3.37e-61,89;UBERON:0002780,7.79e-61,41;UBERON:0001890,7.79e-61,41;UBERON:0003080,7.79e-61,41;UBERON:0006240,7.79e-61,41;UBERON:0003528,2.90e-58,34;UBERON:0002020,2.90e-58,34;UBERON:0001017,3.99e-58,81;UBERON:0001869,1.65e-57,32;UBERON:0001893,7.01e-54,34;UBERON:0002791,3.15e-52,32;UBERON:0003075,2.94e-48,82;UBERON:0007284,2.94e-48,82;UBERON:0002346,1.19e-45,86;UBERON:0003056,2.21e-45,61;UBERON:0010371,3.36e-41,104;UBERON:0004121,2.37e-31,171;UBERON:0000924,2.37e-31,171;UBERON:0006601,2.37e-31,171;UBERON:0007023,5.41e-29,114;UBERON:0010314,6.60e-29,132;UBERON:0011216,2.53e-26,223;UBERON:0001871,3.47e-26,6;UBERON:0000200,5.54e-24,6;UBERON:0002298,2.40e-21,6;UBERON:0000349,8.98e-20,5;UBERON:0000025,1.96e-17,192;UBERON:0001872,1.59e-13,5;UBERON:0004732,6.02e-13,13;UBERON: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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51555 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30024 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=18bp_to_ENST00000474909_5end | |||
|coexpression_cluster_id=C2733 | |||
|description=CAGE_peak_6_at_PEX5L_5end | |||
|id=chr3:179754789..179754804,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.64e-08;2!CL:0000242;2.64e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.69e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.34e-18;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p6@PEX5L | |||
}} |
Revision as of 22:52, 12 September 2013
Short description: | p6@PEX5L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_PEX5L_5end |
Coexpression cluster: | C2733_small_medial_medulloblastoma_paracentral_frontal_parietal_smallcell |
Association with transcript: | 18bp_to_ENST00000474909_5end |
EntrezGene: | PEX5L |
HGNC: | 30024 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.69e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.