FFCP PHASE1:Hg19::chr10:31280407..31280414,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:31280407..31280414,- | |||
|id=chr10:31280407..31280414,- | |||
|ontology_enrichment_celltype=CL:0002194!2.77e-30!63;CL:0000576!2.77e-30!63;CL:0000040!2.77e-30!63;CL:0000559!2.77e-30!63;CL:0002009!4.12e-29!65;CL:0000860!3.64e-28!45;CL:0002057!4.09e-28!42;CL:0000839!1.80e-26!70;CL:0000557!5.49e-26!71;CL:0000766!1.17e-25!76;CL:0000763!1.78e-21!112;CL:0000049!1.78e-21!112;CL:0002087!1.87e-13!119;CL:0002031!1.34e-12!124;CL:0002032!1.51e-12!165;CL:0000837!1.51e-12!165;CL:0000037!1.14e-11!172;CL:0000566!1.14e-11!172;CL:0000738!3.19e-11!140;CL:0000988!1.54e-10!182;CL:0000136!3.02e-08!15;CL:0000134!9.74e-08!358;CL:0002320!2.29e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.21e-56;33!CL:0002057;2.21e-56;33!CL:0000473;3.70e-40;39!CL:0000234;3.70e-40;39!CL:0000576;1.39e-35;48!CL:0000766;8.14e-17;69!CL:0000763;5.93e-12;100!CL:0002581;4.86e-10;1!CL:0002616;1.01e-09;1!CL:0002087;5.20e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.34e-47,42;CL:0002057,1.34e-47,42;CL:0002194,8.53e-47,59;CL:0000576,8.53e-47,59;CL:0000040,8.53e-47,59;CL:0000559,8.53e-47,59;CL:0002009,3.46e-45,61;CL:0000839,1.38e-41,66;CL:0000473,2.57e-41,48;CL:0000234,2.57e-41,48;CL:0000557,6.24e-41,67;CL:0000766,6.45e-38,72;CL:0000763,3.37e-27,108;CL:0000049,3.37e-27,108;CL:0002087,1.07e-22,115;CL:0002031,1.25e-21,120;CL:0000738,9.97e-19,136;CL:0002032,3.21e-17,161;CL:0000837,3.21e-17,161;CL:0000037,2.29e-16,168;CL:0000988,2.28e-15,177;CL:0002581,4.87e-10,1;CL:0002616,1.06e-09,1;CL:0000134,7.69e-09,354;CL:0002320,1.35e-08,361;CL:0000219,9.84e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.31e-34;42!CL:0000049;1.71e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.53e-22!80;UBERON:0001474!4.38e-20!86;UBERON:0004765!5.95e-16!101;UBERON:0001434!5.95e-16!101;UBERON:0002390!1.01e-15!102;UBERON:0003061!1.01e-15!102;UBERON:0002405!3.65e-14!115;UBERON:0002193!1.23e-13!112;UBERON:0003081!1.68e-09!216;UBERON:0002204!3.98e-08!167;UBERON:0002384!2.29e-07!375;UBERON:0005406!3.52e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;5.06e-18;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.70e-36,76;UBERON:0001474,5.63e-33,82;UBERON:0004765,8.39e-30,90;UBERON:0002405,9.44e-29,93;UBERON:0002390,3.86e-27,98;UBERON:0003061,3.86e-27,98;UBERON:0001434,1.53e-26,100;UBERON:0002193,2.32e-24,108;UBERON:0005406,5.28e-18,2;UBERON:0002204,1.13e-14,167;UBERON:0003081,1.68e-11,203;UBERON:0002384,2.91e-08,371;UBERON:0000926,3.79e-07,315;UBERON:0004120,3.79e-07,315;UBERON:0006603,3.79e-07,315 | |||
|phase1_expression=0.363356758541113,0.428201047781966,1.83240725324762,0,0,2.61701557230111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0.727752183563449,2.78914844286822,0.822335776043652,3.40677007984614,1.1507695692886,2.0492856522328,2.12834006899727,2.75796544589295,7.10033151942209,1.35426486594342,0.752969358170419,1.09162460023138,3.14612878223118,1.22433556948361,1.28371610830437,1.91801137739712,0.659702600373432,0,0.426224750532694,0,0,0,3.51748131359441,1.5644487552606,6.29847649644838,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936017060556951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0,0,0.384417447767103,0,0.482561763430822,4.45254199334973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0.156679895773023,0,0,0,0,0,0,2.76516687877612,5.81557880520281,3.33698283423817,0.19538809540204,0,0,0,0,0,3.55567026775618,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627921025580099,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0.612691153526923,0.327872630709804,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:31280407..31280414,- | |||
}} |
Revision as of 02:27, 11 January 2014
Short description: | p@chr10:31280407..31280414, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:31280407..31280414, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.34e-47 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.34e-47 | 42 |
monopoietic cell | 8.53e-47 | 59 |
monocyte | 8.53e-47 | 59 |
monoblast | 8.53e-47 | 59 |
promonocyte | 8.53e-47 | 59 |
macrophage dendritic cell progenitor | 3.46e-45 | 61 |
myeloid lineage restricted progenitor cell | 1.38e-41 | 66 |
defensive cell | 2.57e-41 | 48 |
phagocyte | 2.57e-41 | 48 |
granulocyte monocyte progenitor cell | 6.24e-41 | 67 |
myeloid leukocyte | 6.45e-38 | 72 |
myeloid cell | 3.37e-27 | 108 |
common myeloid progenitor | 3.37e-27 | 108 |
nongranular leukocyte | 1.07e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.25e-21 | 120 |
leukocyte | 9.97e-19 | 136 |
hematopoietic oligopotent progenitor cell | 3.21e-17 | 161 |
hematopoietic multipotent progenitor cell | 3.21e-17 | 161 |
hematopoietic stem cell | 2.29e-16 | 168 |
hematopoietic cell | 2.28e-15 | 177 |
perirenal preadipocyte | 4.87e-10 | 1 |
perirenal adipocyte cell | 1.06e-09 | 1 |
mesenchymal cell | 7.69e-09 | 354 |
connective tissue cell | 1.35e-08 | 361 |
motile cell | 9.84e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.70e-36 | 76 |
bone element | 5.63e-33 | 82 |
skeletal element | 8.39e-30 | 90 |
immune system | 9.44e-29 | 93 |
hematopoietic system | 3.86e-27 | 98 |
blood island | 3.86e-27 | 98 |
skeletal system | 1.53e-26 | 100 |
hemolymphoid system | 2.32e-24 | 108 |
perirenal fat | 5.28e-18 | 2 |
musculoskeletal system | 1.13e-14 | 167 |
lateral plate mesoderm | 1.68e-11 | 203 |
connective tissue | 2.91e-08 | 371 |
mesoderm | 3.79e-07 | 315 |
mesoderm-derived structure | 3.79e-07 | 315 |
presumptive mesoderm | 3.79e-07 | 315 |