FFCP PHASE1:Hg19::chr11:60161612..60161616,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C883 | |||
|description=CAGE_peak_at_chr11:60161612..60161616,+ | |||
|id=chr11:60161612..60161616,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.95e-73!42;CL:0002194!9.93e-73!63;CL:0000576!9.93e-73!63;CL:0000040!9.93e-73!63;CL:0000559!9.93e-73!63;CL:0002009!3.33e-70!65;CL:0000860!1.17e-67!45;CL:0000839!1.64e-64!70;CL:0000557!1.81e-63!71;CL:0000766!1.17e-58!76;CL:0002087!5.79e-40!119;CL:0000763!9.89e-39!112;CL:0000049!9.89e-39!112;CL:0002031!5.30e-36!124;CL:0000738!2.28e-32!140;CL:0002032!6.54e-26!165;CL:0000837!6.54e-26!165;CL:0000037!8.51e-26!172;CL:0000566!8.51e-26!172;CL:0000988!8.81e-24!182;CL:0002393!4.95e-13!9;CL:0002397!4.95e-13!9;CL:0000875!3.52e-11!3;CL:0002396!3.52e-11!3;CL:0000134!6.03e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000576;3.97e-39;48!CL:0000860;2.41e-34;33!CL:0002057;2.41e-34;33!CL:0000875;1.12e-33;3!CL:0002396;1.12e-33;3!CL:0000473;3.73e-29;39!CL:0000234;3.73e-29;39!CL:0000766;6.30e-27;69!CL:0000763;4.78e-16;100!CL:0002087;5.09e-14;104!CL:0000738;1.41e-10;136!CL:0002393;3.50e-08;6!CL:0002397;3.50e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.87e-65,42;CL:0002057,5.87e-65,42;CL:0000473,3.06e-64,48;CL:0000234,3.06e-64,48;CL:0002194,2.26e-57,59;CL:0000576,2.26e-57,59;CL:0000040,2.26e-57,59;CL:0000559,2.26e-57,59;CL:0002009,1.84e-55,61;CL:0000839,3.52e-51,66;CL:0000557,2.12e-50,67;CL:0000766,8.15e-47,72;CL:0000875,8.46e-34,3;CL:0002396,8.46e-34,3;CL:0000763,1.07e-30,108;CL:0000049,1.07e-30,108;CL:0002393,1.98e-30,9;CL:0002397,1.98e-30,9;CL:0002087,1.02e-28,115;CL:0002031,1.90e-27,120;CL:0000738,5.34e-24,136;CL:0002032,5.76e-20,161;CL:0000837,5.76e-20,161;CL:0000037,4.75e-19,168;CL:0000988,5.62e-18,177;CL:0000134,7.48e-08,354;CL:0002320,1.18e-07,361;CL:0000219,5.99e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-47;42!CL:0000049;2.73e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.07e-55!80;UBERON:0002390!2.23e-53!102;UBERON:0003061!2.23e-53!102;UBERON:0001474!1.06e-50!86;UBERON:0002193!1.21e-47!112;UBERON:0004765!1.08e-41!101;UBERON:0001434!1.08e-41!101;UBERON:0002405!1.70e-41!115;UBERON:0002204!6.43e-24!167;UBERON:0003081!1.08e-21!216;UBERON:0000926!6.80e-08!448;UBERON:0004120!6.80e-08!448;UBERON:0006603!6.80e-08!448;UBERON:0000062!7.33e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.78e-44,76;UBERON:0001474,6.12e-41,82;UBERON:0004765,3.63e-37,90;UBERON:0002405,6.45e-36,93;UBERON:0002390,5.31e-34,98;UBERON:0003061,5.31e-34,98;UBERON:0001434,2.74e-33,100;UBERON:0002193,1.07e-30,108;UBERON:0002204,3.55e-19,167;UBERON:0003081,2.10e-15,203;UBERON:0000926,4.02e-09,315;UBERON:0004120,4.02e-09,315;UBERON:0006603,4.02e-09,315;UBERON:0002384,2.22e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56740831967947,0,0.515151135268373,1.16318591023652,0.755751887377619,0.727752183563449,1.16214518452842,0.411167888021826,0.929119112685311,2.01384674625505,0.256160706529101,0.47296445977717,1.03423704220986,0,0,2.25890807451126,0.818718450173537,1.12361742222542,4.59125838556354,0,3.19668562899521,0.329851300186716,0.398927315243264,0.852449501065388,6.67481248845743,0,0.622822248995575,0.75374599577023,0,0.65156653411535,3.63239701580021,0,2.53169909952708,1.69004229049553,1.06302149982522,0.209658645508376,0.22465726229299,0,0.16072558669708,2.56511469367124,2.18808344918999,1.27864907635244,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,6.32501818449095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr11:60161612..60161616,+ | |||
}} |
Revision as of 07:54, 11 January 2014
Short description: | p@chr11:60161612..60161616, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:60161612..60161616, + |
Coexpression cluster: | C883_CD14_CD14CD16_Monocytederived_spleen_Macrophage_Basophils_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.87e-65 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.87e-65 | 42 |
defensive cell | 3.06e-64 | 48 |
phagocyte | 3.06e-64 | 48 |
monopoietic cell | 2.26e-57 | 59 |
monocyte | 2.26e-57 | 59 |
monoblast | 2.26e-57 | 59 |
promonocyte | 2.26e-57 | 59 |
macrophage dendritic cell progenitor | 1.84e-55 | 61 |
myeloid lineage restricted progenitor cell | 3.52e-51 | 66 |
granulocyte monocyte progenitor cell | 2.12e-50 | 67 |
myeloid leukocyte | 8.15e-47 | 72 |
non-classical monocyte | 8.46e-34 | 3 |
CD14-low, CD16-positive monocyte | 8.46e-34 | 3 |
myeloid cell | 1.07e-30 | 108 |
common myeloid progenitor | 1.07e-30 | 108 |
intermediate monocyte | 1.98e-30 | 9 |
CD14-positive, CD16-positive monocyte | 1.98e-30 | 9 |
nongranular leukocyte | 1.02e-28 | 115 |
hematopoietic lineage restricted progenitor cell | 1.90e-27 | 120 |
leukocyte | 5.34e-24 | 136 |
hematopoietic oligopotent progenitor cell | 5.76e-20 | 161 |
hematopoietic multipotent progenitor cell | 5.76e-20 | 161 |
hematopoietic stem cell | 4.75e-19 | 168 |
hematopoietic cell | 5.62e-18 | 177 |
mesenchymal cell | 7.48e-08 | 354 |
connective tissue cell | 1.18e-07 | 361 |
motile cell | 5.99e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.78e-44 | 76 |
bone element | 6.12e-41 | 82 |
skeletal element | 3.63e-37 | 90 |
immune system | 6.45e-36 | 93 |
hematopoietic system | 5.31e-34 | 98 |
blood island | 5.31e-34 | 98 |
skeletal system | 2.74e-33 | 100 |
hemolymphoid system | 1.07e-30 | 108 |
musculoskeletal system | 3.55e-19 | 167 |
lateral plate mesoderm | 2.10e-15 | 203 |
mesoderm | 4.02e-09 | 315 |
mesoderm-derived structure | 4.02e-09 | 315 |
presumptive mesoderm | 4.02e-09 | 315 |
connective tissue | 2.22e-07 | 371 |