FFCP PHASE1:Hg19::chr15:39885197..39885322,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7057 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000484734_5end | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_13_at_THBS1_5end | |||
|id=chr15:39885197..39885322,+ | |||
|ontology_enrichment_celltype=CL:0002371!2.34e-15!591;CL:0000222!8.21e-15!119;CL:0000055!9.37e-14!180;CL:0000057!1.68e-13!75;CL:0000144!4.17e-12!625;CL:0000220!1.26e-11!246;CL:0002321!4.05e-11!248;CL:0000548!5.52e-11!679;CL:0000004!5.52e-11!679;CL:0000255!5.52e-11!679;CL:0002139!8.97e-11!24;CL:0000115!1.92e-10!35;CL:0000012!2.30e-10!682;CL:0002078!4.14e-09!44;CL:0000680!4.41e-08!57;CL:0000056!4.41e-08!57;CL:0000355!4.41e-08!57;CL:0000071!1.19e-07!18;CL:0002546!1.19e-07!18;CL:0000192!1.58e-07!42;CL:0000514!1.58e-07!42;CL:0000359!2.44e-07!32;CL:0000187!2.63e-07!54;CL:0002620!3.05e-07!23;CL:0000183!6.02e-07!59;CL:0000213!7.30e-07!57;CL:0000215!7.30e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.80e-14;24!CL:0000115;4.06e-11;36!CL:0000071;3.51e-10;18!CL:0000349;1.07e-07;19!CL:0002078;2.09e-07;45!CL:1000413;4.21e-07;9!CL:0002620;4.48e-07;23!CL:0002334;6.18e-07;12!CL:0000359;6.76e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.32e-14,24;CL:0000057,1.50e-14,76;CL:0000222,1.03e-13,121;CL:0000115,4.91e-13,36;CL:0002078,1.04e-10,45;CL:0000071,2.64e-10,18;CL:0002546,2.64e-10,18;CL:0002321,8.96e-09,250;CL:0000213,4.08e-08,58;CL:0000215,4.08e-08,58;CL:0000349,7.95e-08,19;CL:0000723,1.03e-07,433;CL:0000048,3.24e-07,427;CL:0000359,3.59e-07,32;CL:1000413,4.25e-07,9;CL:0002620,5.11e-07,23;CL:0000192,5.61e-07,43;CL:0000514,5.61e-07,43;CL:0002334,5.95e-07,12;CL:0000034,6.50e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002546;3.51e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!3.29e-19!84;UBERON:0002049!8.86e-17!79;UBERON:0007798!8.86e-17!79;UBERON:0000055!1.33e-16!69;UBERON:0001009!9.75e-16!113;UBERON:0004535!9.88e-16!110;UBERON:0001981!1.04e-15!60;UBERON:0007500!1.04e-15!60;UBERON:0004537!1.04e-15!60;UBERON:0006965!1.04e-15!60;UBERON:0000468!3.75e-15!659;UBERON:0000467!7.42e-15!625;UBERON:0000480!1.27e-14!626;UBERON:0003914!1.56e-14!118;UBERON:0000926!9.16e-13!448;UBERON:0004120!9.16e-13!448;UBERON:0006603!9.16e-13!448;UBERON:0001637!3.47e-12!42;UBERON:0003509!3.47e-12!42;UBERON:0004572!3.47e-12!42;UBERON:0000490!8.05e-12!138;UBERON:0003102!2.33e-11!95;UBERON:0000486!8.43e-11!82;UBERON:0000914!8.57e-11!83;UBERON:0002329!8.57e-11!83;UBERON:0003077!8.57e-11!83;UBERON:0003059!8.57e-11!83;UBERON:0007282!8.57e-11!83;UBERON:0009618!8.57e-11!83;UBERON:0007285!8.57e-11!83;UBERON:0005256!2.35e-10!143;UBERON:0002100!1.02e-09!216;UBERON:0004573!1.43e-09!33;UBERON:0004571!1.43e-09!33;UBERON:0002199!2.96e-09!45;UBERON:0002416!2.96e-09!45;UBERON:0004290!1.04e-08!70;UBERON:0003081!1.74e-08!216;UBERON:0002097!5.68e-08!40;UBERON:0004923!7.60e-08!57;UBERON:0002385!1.04e-07!63;UBERON:0001015!1.04e-07!63;UBERON:0000383!1.04e-07!63;UBERON:0001986!1.19e-07!18;UBERON:0004638!1.19e-07!18;UBERON:0004852!1.19e-07!18;UBERON:0001134!1.25e-07!61;UBERON:0002036!1.25e-07!61;UBERON:0003082!1.25e-07!61;UBERON:0000947!1.55e-07!21;UBERON:0010191!1.55e-07!21;UBERON:0000487!1.61e-07!22;UBERON:0006914!4.82e-07!25;UBERON:0000923!8.03e-07!604;UBERON:0005291!8.03e-07!604;UBERON:0006598!8.03e-07!604;UBERON:0002532!8.03e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.76e-11;42!UBERON:0003509;4.76e-11;42!UBERON:0004572;4.76e-11;42!UBERON:0000055;3.22e-10;65!UBERON:0004638;3.51e-10;18!UBERON:0001986;3.51e-10;18!UBERON:0004852;3.51e-10;18!UBERON:0007500;4.33e-10;56!UBERON:0001981;4.33e-10;56!UBERON:0004537;4.33e-10;56!UBERON:0000487;9.57e-10;22!UBERON:0004573;2.53e-09;33!UBERON:0004571;2.53e-09;33!UBERON:0006914;1.25e-08;25!UBERON:0002199;1.62e-07;46!UBERON:0002416;1.62e-07;46!UBERON:0005631;1.64e-07;10!UBERON:0000158;1.64e-07;10!UBERON:0000947;2.05e-07;21!UBERON:0010191;2.05e-07;21!UBERON:0002097;2.66e-07;41!UBERON:0003915;4.21e-07;9!UBERON:0004700;4.21e-07;9!UBERON:0001917;4.21e-07;9!UBERON:0003914;4.66e-07;74!UBERON:0003688;6.00e-07;6!UBERON:0002358;6.00e-07;6!UBERON:0003684;6.00e-07;6!UBERON:0001178;6.00e-07;6!UBERON:0002049;8.47e-07;75!UBERON:0007798;8.47e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,9.59e-20,68;UBERON:0004872,1.58e-18,83;UBERON:0007500,1.46e-17,59;UBERON:0001981,1.46e-17,59;UBERON:0004537,1.46e-17,59;UBERON:0006965,1.46e-17,59;UBERON:0002049,2.30e-16,78;UBERON:0007798,2.30e-16,78;UBERON:0004535,1.85e-13,109;UBERON:0001637,2.69e-13,42;UBERON:0003509,2.69e-13,42;UBERON:0004572,2.69e-13,42;UBERON:0003914,1.18e-12,117;UBERON:0001009,1.45e-12,112;UBERON:0003102,3.40e-11,99;UBERON:0002199,9.71e-11,46;UBERON:0002416,9.71e-11,46;UBERON:0004638,2.64e-10,18;UBERON:0001986,2.64e-10,18;UBERON:0004852,2.64e-10,18;UBERON:0000487,7.41e-10,22;UBERON:0000926,7.83e-10,315;UBERON:0004120,7.83e-10,315;UBERON:0006603,7.83e-10,315;UBERON:0004573,1.53e-09,33;UBERON:0004571,1.53e-09,33;UBERON:0004923,2.86e-09,66;UBERON:0002097,4.85e-09,41;UBERON:0000490,7.53e-09,148;UBERON:0006914,9.59e-09,25;UBERON:0003081,9.59e-09,203;UBERON:0000486,3.57e-08,83;UBERON:0005631,4.95e-08,14;UBERON:0000158,4.95e-08,14;UBERON:0000947,2.28e-07,21;UBERON:0010191,2.28e-07,21;UBERON:0007503,3.42e-07,78;UBERON:0003915,4.25e-07,9;UBERON:0004700,4.25e-07,9;UBERON:0001917,4.25e-07,9;UBERON:0004871,4.69e-07,8;UBERON:0003688,5.93e-07,6;UBERON:0002358,5.93e-07,6;UBERON:0003684,5.93e-07,6;UBERON:0001178,5.93e-07,6 | |||
|phase1_expression=28.7051839247479,35.7547874897942,16.2097564710367,53.0388481271591,7.59833860526389,53.2126499701225,7.59899634504932,1.26343974685366,1.04474251279935,3.44027511102112,0.697801167972428,5.24259293112413,8.96807725976742,0.74259811776028,2.31978163009541,11.4295274896802,9.04041792035965,7.30310090387373,11.7103871709722,0,1.22400414746552,0.313454721478088,0,0.684372125364421,0.627713197974014,0,0,0,0.786728553697808,0.383829398097213,1.54816123316076,0.919421224478927,0.30120591877825,0.739508020333575,0,0,0,0.553995408531877,5.41470008169383,0.217010870715852,0,0.32389366601898,0,1.16318591023652,0,0.242584061187816,4.88100977501938,0.822335776043652,0.309706370895104,6.32923263108731,1.2808035326455,0.709446689665756,7.92915065694223,0.645484683583826,0,4.89430082810772,1.09162460023138,0.898893937780338,6.12167784741805,1.28371610830437,0,2.30895910130701,0.199463657621632,0.426224750532694,14.5104619314292,0.56738522469114,0,7.28621129244555,1.5644487552606,0.868755378820466,9.08099253950053,0.368277635987565,0.316462387440884,0,0,0,0.22465726229299,2.55300717830561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,5.62595272111533,0,5.0133791063589,1.88300474649071,0,6.32625331393427,0.0945348171640679,0.443458794925128,0.43917392846563,0.327447688744282,0.728590576585084,1.85392221392215,0,0,0,0,0,0,6.16163462836786,3.4409383804245,3.47140501607594,14.6980064900242,2.51699661725944,9.35401342596229,7.73281376186199,4.39308490587859,3.5576626268671,9.37217715741077,7.65375702507379,5.32190474002959,6.34561349625241,10.2945662496843,5.67099363517232,5.53658315361295,2.91888184414021,3.82879033643296,1.53316637465883,0,6.77846452542507,0,0,2.61656431285521,32.3031768601957,10.8902240031539,7.94455084879313,4.01571269048339,1.77334191099179,2.80338800071154,4.2699598291882,12.333377420858,1.24484414159907,0.538842688278752,2.61539044981534,0.908144565869588,0.576175924479999,0,0.624320153660641,1.1409436430889,0.747243402759005,0.117434498643765,0.323745888736263,0.280901613404497,1.63323337003915,0.859840221182376,1.65321249881225,5.94001428641027,29.6720315134268,0,0,0.168336113954066,0.125118519871964,2.49357703935765,3.5118209670467,16.8568287689461,10.5166641234618,4.19699077692078,20.0916391971525,15.803246772574,16.7426201916054,8.70264178644767,6.90451945897541,15.2007918626921,9.86419338557426,8.43881661206331,4.18979122193154,8.58274832429989,9.38908966151453,7.43571861366535,8.87523981291536,4.13083602733325,6.61286310010902,3.67195621010264,5.45492241181669,2.29443676311203,0,0,0,0,0,0,10.9514672630871,12.2215778256648,9.66944449467364,12.5379340568634,2.16563844500876,0.473227200159376,0.337169380156203,0.482022059766964,0.661763836394364,0.653638332277218,0.949082476444386,0.943819157121151,0.98110732562673,0.769494313892781,1.4763109092493,4.20725321410337,0.4115740113314,0,0,0,0,0,0.122988438543114,0.171567810298526,4.06076056011915,2.24803506515239,1.70899253099772,1.11106134190236,0,0,1.44331342025273,0,0.469634776943287,11.8380487164081,23.1492756288305,18.454652766756,0.790204397959275,0,0,0,0,2.81201501960331,6.71928512795438,1.70130116690864,4.65704318054811,3.19697332365358,7.28427090413901,0.492663237895943,0,0,0,0,0.253991577168676,0,0,0,0.822619941626588,0,0,0.224262168690721,0,0.22001485746285,1.68053230485111,0,0.845302752556,6.91439103120663,6.24044621468197,0.771622122786426,0,0.266422179016099,1.14382394926518,0,0.823240336780769,0.977208552881205,0.710783897485092,0,0,0,0,0,0,0,4.79249710983165,4.59447743336456,0,3.18518874668674,2.4657158706046,3.04403637507822,0.112085143993527,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,2.99161459204025,0,0.736148950314839,0.500170521059677,0.271265023699736,23.5007073529812,38.3622325913898,16.4010511635292,13.8226869691402,3.61135319673263,0,0,1.32845119707087,2.39679919104214,5.47366771148922,0.195801157462741,0.686286847621712,0.620304078368662,0.215714200818617,0.533637789017222,2.12189300012382,6.65741758041988,3.62868351995616,33.7426618633537,45.5782060665546,45.4669352981579,11.9169408807802,23.5385334570684,31.2056607018599,16.325987308949,2.15893571323718,4.79416658345443,0.739144404124282,1.55776328755086,0.464841513839837,0.241718899183244,8.42127175273796,0.828728900423067,2.52591785962135,0.728364672026868,2.75361271414791,0.451199612907412,0,0,0,0.105551628892876,6.8240030442538,3.40187410553031,4.10240240594065,26.2186329573492,0.270946437543853,0,1.01950509218015,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0.412164046590889,0.0915694648183434,0,2.87132768998086,4.55042172225565,9.64103579064957,0.193341436584244,0.154048617114644,0.307007349452259,0.413509717453592,0.966782203814463,1.74020032697074,0.255679882248303,0.623224249527161,3.30569830721956,4.22818148203234,6.89108647470754,0.708104465988849,0.929691098594572,10.38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| |||
|short_description=p13@THBS1 | |||
}} |
Revision as of 22:56, 11 January 2014
Short description: | p13@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | 0bp_to_ENST00000484734_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.32e-14 | 24 |
fibroblast | 1.50e-14 | 76 |
mesodermal cell | 1.03e-13 | 121 |
endothelial cell | 4.91e-13 | 36 |
meso-epithelial cell | 1.04e-10 | 45 |
blood vessel endothelial cell | 2.64e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.64e-10 | 18 |
embryonic cell | 8.96e-09 | 250 |
lining cell | 4.08e-08 | 58 |
barrier cell | 4.08e-08 | 58 |
extraembryonic cell | 7.95e-08 | 19 |
somatic stem cell | 1.03e-07 | 433 |
multi fate stem cell | 3.24e-07 | 427 |
vascular associated smooth muscle cell | 3.59e-07 | 32 |
endothelial cell of artery | 4.25e-07 | 9 |
skin fibroblast | 5.11e-07 | 23 |
smooth muscle cell | 5.61e-07 | 43 |
smooth muscle myoblast | 5.61e-07 | 43 |
preadipocyte | 5.95e-07 | 12 |
stem cell | 6.50e-07 | 441 |