FFCP PHASE1:Hg19::chr1:243418344..243418356,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9859 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28920 | |||
|TSSclassifier=strong | |||
|UniProt=Q5SW79 | |||
|association_with_transcript=0bp_to_ENST00000366542_5end | |||
|description=CAGE_peak_9_at_CEP170_5end | |||
|id=chr1:243418344..243418356,- | |||
|ontology_enrichment_celltype=CL:0000037!1.02e-21!172;CL:0000566!1.02e-21!172;CL:0002032!7.02e-20!165;CL:0000837!7.02e-20!165;CL:0000738!9.27e-20!140;CL:0000988!1.75e-19!182;CL:0002087!5.02e-17!119;CL:0000763!1.87e-16!112;CL:0000049!1.87e-16!112;CL:0000766!1.79e-15!76;CL:0002031!9.03e-15!124;CL:0002009!6.31e-14!65;CL:0000557!9.35e-14!71;CL:0002194!2.01e-13!63;CL:0000576!2.01e-13!63;CL:0000040!2.01e-13!63;CL:0000559!2.01e-13!63;CL:0002057!1.40e-12!42;CL:0000839!1.77e-11!70;CL:0000860!4.02e-11!45;CL:0002393!9.53e-07!9;CL:0002397!9.53e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.58e-10;13!CL:0000576;2.35e-09;48!CL:0002393;9.10e-08;6!CL:0002397;9.10e-08;6!CL:0000766;8.03e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.15e-19,168;CL:0000738,1.31e-19,136;CL:0002087,2.24e-19,115;CL:0000766,1.79e-18,72;CL:0002032,4.19e-18,161;CL:0000837,4.19e-18,161;CL:0000988,1.74e-17,177;CL:0002009,3.69e-17,61;CL:0002194,4.87e-17,59;CL:0000576,4.87e-17,59;CL:0000040,4.87e-17,59;CL:0000559,4.87e-17,59;CL:0002031,7.13e-16,120;CL:0000557,8.21e-16,67;CL:0000763,1.13e-15,108;CL:0000049,1.13e-15,108;CL:0000473,2.94e-14,48;CL:0000234,2.94e-14,48;CL:0000839,5.36e-14,66;CL:0000860,1.52e-12,42;CL:0002057,1.52e-12,42;CL:0002393,2.98e-11,9;CL:0002397,2.98e-11,9;CL:0000236,1.72e-09,14 | |||
|ontology_enrichment_development_v019=CL:0002057;3.14e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.64e-12!112;UBERON:0002371!2.60e-12!80;UBERON:0002390!2.73e-12!102;UBERON:0003061!2.73e-12!102;UBERON:0001049!6.60e-12!57;UBERON:0005068!6.60e-12!57;UBERON:0006241!6.60e-12!57;UBERON:0007135!6.60e-12!57;UBERON:0002616!1.41e-11!59;UBERON:0001474!4.91e-11!86;UBERON:0003080!8.69e-11!42;UBERON:0002780!1.11e-10!41;UBERON:0001890!1.11e-10!41;UBERON:0006240!1.11e-10!41;UBERON:0000955!1.46e-10!69;UBERON:0006238!1.46e-10!69;UBERON:0001017!2.39e-10!82;UBERON:0000073!4.62e-10!94;UBERON:0001016!4.62e-10!94;UBERON:0005743!1.36e-09!86;UBERON:0001893!1.45e-08!34;UBERON:0004765!2.16e-08!101;UBERON:0001434!2.16e-08!101;UBERON:0001869!2.49e-08!32;UBERON:0002020!3.50e-08!34;UBERON:0003528!3.50e-08!34;UBERON:0002791!3.89e-08!33;UBERON:0007023!4.53e-08!115;UBERON:0002619!1.12e-07!22;UBERON:0002405!2.51e-07!115;UBERON:0001950!3.56e-07!20;UBERON:0000956!9.40e-07!25;UBERON:0000203!9.40e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.32e-11;41!UBERON:0001890;3.32e-11;41!UBERON:0001869;3.63e-11;32!UBERON:0001893;4.37e-11;34!UBERON:0000073;4.58e-11;53!UBERON:0002616;4.58e-11;53!UBERON:0003528;2.65e-10;34!UBERON:0002020;2.65e-10;34!UBERON:0002791;2.86e-10;32!UBERON:0001950;3.40e-10;20!UBERON:0002619;3.66e-10;22!UBERON:0000956;1.43e-09;25!UBERON:0000203;1.43e-09;25!UBERON:0001016;3.91e-07;83!UBERON:0001017;5.79e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.62e-19,56;UBERON:0005068,1.62e-19,56;UBERON:0006241,1.62e-19,56;UBERON:0007135,1.62e-19,56;UBERON:0000073,1.99e-18,53;UBERON:0002616,1.99e-18,53;UBERON:0002780,1.78e-16,41;UBERON:0001890,1.78e-16,41;UBERON:0003080,1.78e-16,41;UBERON:0006240,1.78e-16,41;UBERON:0001017,4.65e-15,81;UBERON:0001016,1.01e-14,89;UBERON:0000955,1.26e-14,68;UBERON:0006238,1.26e-14,68;UBERON:0002371,3.53e-14,76;UBERON:0001893,4.36e-14,34;UBERON:0001869,5.39e-14,32;UBERON:0001474,3.47e-13,82;UBERON:0002405,8.38e-13,93;UBERON:0002390,1.40e-12,98;UBERON:0003061,1.40e-12,98;UBERON:0002791,1.42e-12,32;UBERON:0003528,1.55e-12,34;UBERON:0002020,1.55e-12,34;UBERON:0002193,4.92e-12,108;UBERON:0001950,3.13e-11,20;UBERON:0002619,3.70e-11,22;UBERON:0003075,4.91e-11,82;UBERON:0007284,4.91e-11,82;UBERON:0004765,6.36e-11,90;UBERON:0002346,1.12e-10,86;UBERON:0000956,2.31e-10,25;UBERON:0000203,2.31e-10,25;UBERON:0003056,1.15e-09,61;UBERON:0001434,2.11e-09,100;UBERON:0007023,8.37e-08,114 | |||
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| |||
|short_description=p9@CEP170 | |||
}} |
Revision as of 01:04, 11 January 2014
Short description: | p9@CEP170 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CEP170_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000366542_5end |
EntrezGene: | CEP170 |
HGNC: | 28920 |
UniProt: | Q5SW79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.15e-19 | 168 |
leukocyte | 1.31e-19 | 136 |
nongranular leukocyte | 2.24e-19 | 115 |
myeloid leukocyte | 1.79e-18 | 72 |
hematopoietic oligopotent progenitor cell | 4.19e-18 | 161 |
hematopoietic multipotent progenitor cell | 4.19e-18 | 161 |
hematopoietic cell | 1.74e-17 | 177 |
macrophage dendritic cell progenitor | 3.69e-17 | 61 |
monopoietic cell | 4.87e-17 | 59 |
monocyte | 4.87e-17 | 59 |
monoblast | 4.87e-17 | 59 |
promonocyte | 4.87e-17 | 59 |
hematopoietic lineage restricted progenitor cell | 7.13e-16 | 120 |
granulocyte monocyte progenitor cell | 8.21e-16 | 67 |
myeloid cell | 1.13e-15 | 108 |
common myeloid progenitor | 1.13e-15 | 108 |
defensive cell | 2.94e-14 | 48 |
phagocyte | 2.94e-14 | 48 |
myeloid lineage restricted progenitor cell | 5.36e-14 | 66 |
classical monocyte | 1.52e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.52e-12 | 42 |
intermediate monocyte | 2.98e-11 | 9 |
CD14-positive, CD16-positive monocyte | 2.98e-11 | 9 |
B cell | 1.72e-09 | 14 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.62e-19 | 56 |
neural rod | 1.62e-19 | 56 |
future spinal cord | 1.62e-19 | 56 |
neural keel | 1.62e-19 | 56 |
regional part of nervous system | 1.99e-18 | 53 |
regional part of brain | 1.99e-18 | 53 |
regional part of forebrain | 1.78e-16 | 41 |
forebrain | 1.78e-16 | 41 |
anterior neural tube | 1.78e-16 | 41 |
future forebrain | 1.78e-16 | 41 |
central nervous system | 4.65e-15 | 81 |
nervous system | 1.01e-14 | 89 |
brain | 1.26e-14 | 68 |
future brain | 1.26e-14 | 68 |
bone marrow | 3.53e-14 | 76 |
telencephalon | 4.36e-14 | 34 |
cerebral hemisphere | 5.39e-14 | 32 |
bone element | 3.47e-13 | 82 |
immune system | 8.38e-13 | 93 |
hematopoietic system | 1.40e-12 | 98 |
blood island | 1.40e-12 | 98 |
regional part of telencephalon | 1.42e-12 | 32 |
brain grey matter | 1.55e-12 | 34 |
gray matter | 1.55e-12 | 34 |
hemolymphoid system | 4.92e-12 | 108 |
neocortex | 3.13e-11 | 20 |
regional part of cerebral cortex | 3.70e-11 | 22 |
neural plate | 4.91e-11 | 82 |
presumptive neural plate | 4.91e-11 | 82 |
skeletal element | 6.36e-11 | 90 |
neurectoderm | 1.12e-10 | 86 |
cerebral cortex | 2.31e-10 | 25 |
pallium | 2.31e-10 | 25 |
pre-chordal neural plate | 1.15e-09 | 61 |
skeletal system | 2.11e-09 | 100 |
adult organism | 8.37e-08 | 114 |