FFCP PHASE1:Hg19::chr1:70033647..70033678,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57554 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18531 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-402bp_to_ENST00000310961_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_7_at_LRRC7_5end | |||
|id=chr1:70033647..70033678,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.46e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.48e-09;82!UBERON:0010122;3.87e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.29e-54!86;UBERON:0001049!2.31e-53!57;UBERON:0005068!2.31e-53!57;UBERON:0006241!2.31e-53!57;UBERON:0007135!2.31e-53!57;UBERON:0000073!2.66e-53!94;UBERON:0001016!2.66e-53!94;UBERON:0001017!6.35e-52!82;UBERON:0000955!8.41e-45!69;UBERON:0006238!8.41e-45!69;UBERON:0002616!6.87e-44!59;UBERON:0002780!8.13e-43!41;UBERON:0001890!8.13e-43!41;UBERON:0006240!8.13e-43!41;UBERON:0003075!7.34e-42!86;UBERON:0007284!7.34e-42!86;UBERON:0003080!1.55e-41!42;UBERON:0001869!3.91e-41!32;UBERON:0001893!4.95e-41!34;UBERON:0002020!8.78e-41!34;UBERON:0003528!8.78e-41!34;UBERON:0002791!1.98e-39!33;UBERON:0002346!2.97e-39!90;UBERON:0002619!1.20e-34!22;UBERON:0003056!8.99e-32!61;UBERON:0001950!2.17e-31!20;UBERON:0000956!9.38e-30!25;UBERON:0000203!9.38e-30!25;UBERON:0007023!2.62e-29!115;UBERON:0004121!1.76e-27!169;UBERON:0000153!1.23e-26!129;UBERON:0007811!1.23e-26!129;UBERON:0000924!2.14e-26!173;UBERON:0006601!2.14e-26!173;UBERON:0000033!3.38e-25!123;UBERON:0002420!8.30e-13!9;UBERON:0007245!8.30e-13!9;UBERON:0010009!8.30e-13!9;UBERON:0010011!8.30e-13!9;UBERON:0000454!8.30e-13!9;UBERON:0003076!1.33e-12!15;UBERON:0003057!1.33e-12!15;UBERON:0002308!2.43e-12!9;UBERON:0000125!2.43e-12!9;UBERON:0000025!5.25e-12!194;UBERON:0001871!3.93e-11!7;UBERON:0000200!6.89e-11!6;UBERON:0000349!8.53e-10!5;UBERON:0009663!1.15e-09!7;UBERON:0002021!1.27e-09!5;UBERON:0001872!3.57e-09!5;UBERON:0004733!6.34e-09!12;UBERON:0002028!6.34e-09!12;UBERON:0007277!6.34e-09!12;UBERON:0000483!1.24e-08!309;UBERON:0000369!1.51e-08!4;UBERON:0002435!1.51e-08!4;UBERON:0000204!1.51e-08!4;UBERON:0010082!1.51e-08!4;UBERON:0000119!2.18e-08!312;UBERON:0004732!4.28e-08!13;UBERON:0000475!7.50e-08!365;UBERON:0004111!8.66e-08!241;UBERON:0000477!2.58e-07!286;UBERON:0000064!4.44e-07!219;UBERON:0002298!7.86e-07!8;UBERON:0005383!8.11e-07!3;UBERON:0005382!8.11e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.61e-74;32!UBERON:0002791;1.03e-70;32!UBERON:0002619;6.44e-68;22!UBERON:0001893;4.08e-67;34!UBERON:0003528;6.60e-67;34!UBERON:0002020;6.60e-67;34!UBERON:0001950;9.52e-61;20!UBERON:0000956;1.88e-59;25!UBERON:0000203;1.88e-59;25!UBERON:0002780;3.95e-57;41!UBERON:0001890;3.95e-57;41!UBERON:0000073;4.30e-37;53!UBERON:0002616;4.30e-37;53!UBERON:0000955;4.95e-29;68!UBERON:0001017;5.00e-27;75!UBERON:0002420;2.06e-26;9!UBERON:0007245;2.06e-26;9!UBERON:0010009;2.06e-26;9!UBERON:0010011;2.06e-26;9!UBERON:0000454;2.06e-26;9!UBERON:0001016;9.10e-23;83!UBERON:0000200;1.02e-21;6!UBERON:0000125;3.93e-20;9!UBERON:0002308;3.93e-20;9!UBERON:0009663;1.06e-19;7!UBERON:0001871;2.24e-19;6!UBERON:0000349;2.31e-19;5!UBERON:0002021;5.41e-19;5!UBERON:0000369;9.83e-17;4!UBERON:0002435;9.83e-17;4!UBERON:0000204;9.83e-17;4!UBERON:0005383;5.54e-13;3!UBERON:0005382;5.54e-13;3!UBERON:0001872;3.01e-12;5!UBERON:0001870;8.81e-12;3!UBERON:0011216;1.60e-09;132!UBERON:0001873;3.87e-09;2!UBERON:0001954;8.31e-09;2!UBERON:0003022;8.31e-09;2!UBERON:0002421;8.31e-09;2!UBERON:0002600;8.31e-09;2!UBERON:0007023;1.25e-08;114!UBERON:0001897;1.29e-08;2!UBERON:0010225;1.29e-08;2!UBERON:0002771;1.62e-08;2!UBERON:0001876;1.62e-08;2!UBERON:0002702;4.14e-08;2!UBERON:0001875;4.14e-08;2!UBERON:0006514;4.14e-08;2!UBERON:0010314;4.80e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.17e-84,32;UBERON:0002780,2.35e-80,41;UBERON:0001890,2.35e-80,41;UBERON:0003080,2.35e-80,41;UBERON:0006240,2.35e-80,41;UBERON:0001893,3.72e-79,34;UBERON:0003528,6.85e-79,34;UBERON:0002020,6.85e-79,34;UBERON:0002791,3.26e-78,32;UBERON:0001049,4.83e-69,56;UBERON:0005068,4.83e-69,56;UBERON:0006241,4.83e-69,56;UBERON:0007135,4.83e-69,56;UBERON:0000073,5.17e-69,53;UBERON:0002616,5.17e-69,53;UBERON:0001017,2.32e-68,81;UBERON:0002619,4.21e-68,22;UBERON:0000955,4.77e-62,68;UBERON:0006238,4.77e-62,68;UBERON:0001950,5.27e-61,20;UBERON:0001016,9.59e-61,89;UBERON:0000956,1.29e-59,25;UBERON:0000203,1.29e-59,25;UBERON:0003056,6.68e-52,61;UBERON:0003075,8.72e-45,82;UBERON:0007284,8.72e-45,82;UBERON:0002346,2.43e-42,86;UBERON:0010371,1.20e-33,104;UBERON:0010314,2.44e-30,132;UBERON:0004121,1.25e-27,171;UBERON:0000924,1.25e-27,171;UBERON:0006601,1.25e-27,171;UBERON:0002420,1.48e-26,9;UBERON:0007245,1.48e-26,9;UBERON:0010009,1.48e-26,9;UBERON:0010011,1.48e-26,9;UBERON:0000454,1.48e-26,9;UBERON:0007023,5.69e-26,114;UBERON:0011216,2.41e-24,223;UBERON:0000200,8.03e-22,6;UBERON:0000125,3.66e-20,9;UBERON:0002308,3.66e-20,9;UBERON:0009663,1.08e-19,7;UBERON:0001871,1.55e-19,6;UBERON:0000349,1.91e-19,5;UBERON:0002021,4.58e-19,5;UBERON:0000025,6.65e-17,192;UBERON:0000369,9.84e-17,4;UBERON:0002435,9.84e-17,4;UBERON:0000204,9.84e-17,4;UBERON:0010082,9.84e-17,4;UBERON:0005383,5.44e-13,3;UBERON:0005382,5.44e-13,3;UBERON:0001872,3.60e-12,5;UBERON:0001870,6.41e-12,3;UBERON:0004111,7.34e-12,240;UBERON:0001873,3.80e-09,2;UBERON:0010122,3.80e-09,2;UBERON:0000483,5.77e-09,306;UBERON:0000119,8.52e-09,309;UBERON:0001954,1.01e-08,2;UBERON:0003022,1.01e-08,2;UBERON:0002421,1.01e-08,2;UBERON:0002600,1.01e-08,2;UBERON:0001876,1.09e-08,2;UBERON:0002771,1.60e-08,2;UBERON:0001897,1.60e-08,2;UBERON:0010225,1.60e-08,2;UBERON:0002702,3.14e-08,2;UBERON:0001875,4.22e-08,2;UBERON:0006514,4.22e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.403213486449465,0,0.434473211648397,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.589405839739707,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,18.219579540067,6.95959931499926,6.5331343480396,5.10351001322531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0.144269212976445,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46174797895425,0,1.33228787199128,2.81974010175699,0,0,0,0,0,0,0,0,2.98244294329889,3.93874365949436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,2.13366625772258,15.9691038400955,0,0,0,0,0,0,0,0,0.173624994933292,5.31444831488303,8.92413645828019,0,0.110579259931225,0,0.87754158861589,0.653630781113941,0,0.307801034015188,4.10191401049204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0.943615861729479,0,4.45102446878144,0,0,0,0,0,15.9157836047855,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441280633457501,0.451961481561065,0,0,5.9512148198526,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0,0,1.80126086612937,2.46429682005587,0,0.859530882839914,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0.78741985211799,0,3.18091875923721,4.08610218334727,0,0,0,0,0,6.25720433577654,0,0.315222829196793,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,1.80996138906171,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,3.41673541725497,2.8793914062495,0.573409195690071,0.221858103073705,0.620964029413834,0.138348634936231,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0.521988583930423,0,2.77826969188601,0,0.179088841081487,0,0.438568099157414,0.176689145945881,0.192914038270915,0,0,0,0,2.76516872303461,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.314531883711793,0.764467467344097,0,0,0,0,0,0,0.80057074828547,0,0,8.79940383821496,2.8339315265117,2.55414174491442,3.48697819209284,18.6533055204071,2.48966108871184,3.87541549516443,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,3.30934164630134,0.781078098613847,1.44680757550829,2.40980078736846,18.5971435066195,0,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0.171488009437418,1.42736439251347,2.69668371607681,0,0,0.078493092850514,16.8113681210122,0,0,0.647782773655864,0,0.142953088353313,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,1.50962843566674,0,0.437119121007915,1.41095188908457,0,3.77082475362602,0.588925401344836,0.594092800654172,1.6906229103336,0,0,0,0,0,0,0,0,0,0,0,4.21547239183671,12.2178193295306,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1458471972939,2.27552590896169,0.213233981900981,0.714193294391221,0,0.124149428591716,2.80329656451534,0.318235791390825,2.22328907854041,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@LRRC7 | |||
}} |
Revision as of 19:02, 10 January 2014
Short description: | p7@LRRC7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LRRC7_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -402bp_to_ENST00000310961_5end |
EntrezGene: | LRRC7 |
HGNC: | 18531 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.46e-08 | 8 |