FFCP PHASE1:Hg19::chr20:48808321..48808329,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1051 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1834 | |||
|TSSclassifier=strong | |||
|UniProt=Q99557 | |||
|association_with_transcript=29bp_to_D63161_5end | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_18_at_CEBPB_5end | |||
|id=chr20:48808321..48808329,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.53e-27!76;CL:0002057!1.69e-26!42;CL:0000860!3.88e-26!45;CL:0000839!2.40e-23!70;CL:0002194!4.14e-23!63;CL:0000576!4.14e-23!63;CL:0000040!4.14e-23!63;CL:0000559!4.14e-23!63;CL:0000557!1.44e-22!71;CL:0002009!1.76e-21!65;CL:0000763!1.48e-11!112;CL:0000049!1.48e-11!112;CL:0000738!1.29e-08!140;CL:0002087!4.92e-08!119;CL:0002031!7.08e-08!124;CL:0002320!4.19e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.39e-69;33!CL:0002057;9.39e-69;33!CL:0000473;9.54e-56;39!CL:0000234;9.54e-56;39!CL:0000576;9.12e-40;48!CL:0000766;4.41e-30;69!CL:0000763;4.93e-14;100!CL:0002087;7.18e-09;104!CL:0000775;1.16e-08;3!CL:0000738;3.38e-08;136!CL:0000094;7.99e-08;8!CL:0002615;1.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.23e-74,48;CL:0000234,6.23e-74,48;CL:0000860,3.23e-73,42;CL:0002057,3.23e-73,42;CL:0000766,1.68e-61,72;CL:0002194,8.88e-57,59;CL:0000576,8.88e-57,59;CL:0000040,8.88e-57,59;CL:0000559,8.88e-57,59;CL:0002009,1.44e-54,61;CL:0000839,2.27e-52,66;CL:0000557,2.01e-51,67;CL:0000763,7.29e-37,108;CL:0000049,7.29e-37,108;CL:0000738,1.03e-26,136;CL:0002087,7.87e-24,115;CL:0002031,8.74e-24,120;CL:0002032,1.16e-20,161;CL:0000837,1.16e-20,161;CL:0000037,2.70e-19,168;CL:0000988,1.06e-17,177;CL:0002320,2.15e-12,361;CL:0000134,2.76e-12,354;CL:0000219,1.66e-10,386;CL:0000723,4.74e-10,433;CL:0000048,7.82e-10,427;CL:0000034,1.40e-09,441;CL:0000775,7.72e-09,3;CL:0000094,5.46e-08,8;CL:0002615,1.81e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.34e-52;42!CL:0000049;2.18e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.57e-18!80;UBERON:0002390!5.68e-18!102;UBERON:0003061!5.68e-18!102;UBERON:0001474!2.48e-16!86;UBERON:0002193!1.16e-14!112;UBERON:0004765!1.74e-13!101;UBERON:0001434!1.74e-13!101;UBERON:0002405!8.31e-11!115;UBERON:0002204!1.00e-07!167;UBERON:0000926!5.14e-07!448;UBERON:0004120!5.14e-07!448;UBERON:0006603!5.14e-07!448;UBERON:0002384!5.91e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.10e-44,76;UBERON:0001474,5.57e-40,82;UBERON:0004765,2.63e-37,90;UBERON:0002405,6.31e-34,93;UBERON:0002390,1.58e-33,98;UBERON:0003061,1.58e-33,98;UBERON:0001434,1.97e-32,100;UBERON:0002193,2.30e-29,108;UBERON:0002204,6.31e-18,167;UBERON:0003081,1.62e-14,203;UBERON:0002384,1.20e-11,371;UBERON:0000926,7.10e-11,315;UBERON:0004120,7.10e-11,315;UBERON:0006603,7.10e-11,315 | |||
|phase1_expression=2.36181893051724,3.8538094300377,1.9733616573436,1.0007329835313,1.34088328328186,0,0,0,0.522371256399677,0.245733936501509,0.697801167972428,0,0.527533956456907,0.123766352960047,0,2.01697543935533,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0.786728553697808,0,1.39334510984468,0.919421224478927,0.6024118375565,0.369754010166788,0.154934401160603,0,0,0,0.200544447470142,0.868043482863407,0.447830948479849,0,0.77272670290256,4.21654892460738,3.02300754951048,2.18325655069035,4.64858073811369,3.70051099219643,4.64559556342655,4.89077066947656,3.58624989140741,5.91205574721463,2.41321976515633,3.87290810150296,5.41705946377367,7.34145124216158,4.63940455098338,6.06753408001728,5.20342617030534,3.85114832491312,3.19668562899521,2.63881040149373,6.78176435913548,2.98357325372886,6.09439401120026,3.97169657283798,2.4912889959823,6.28121663141858,6.77927793946262,5.2125322729228,6.65939452896706,3.68277635987565,1.58231193720442,2.32380814943136,1.70083439972035,0.628975936525128,1.68492946719743,1.50176892841506,0.803627933485401,0.570025487482497,1.19350006319454,1.46131323011707,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0.32592226663359,0,0,0,0,0.664601683750863,0,0,0.260118695119756,0,0.276350017785848,0,0.444859689486181,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.604820229674197,0.267440195783507,0.144824403882799,0,0,0.12786256184353,0.722878304769133,0.50133791063589,0.579386075843295,0,0,0.0945348171640679,0.443458794925128,0.087834785693126,0.327447688744282,1.09288586487763,0,0.324547393654683,0.348259474598534,0.531831842075461,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0,0,0.112611480483322,0,0,0.366403487860815,2.63560834872127,0,0,0.993943903390637,0.633152558322899,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0.269421344139376,0.163461903113459,0,0.576175924479999,0.234321431833797,0.312160076830321,0,0.747243402759005,0.587172493218824,0.323745888736263,0,0,0.245668634623536,0.309977343527296,1.18800285728205,0.989067717114227,0,0,0.168336113954066,0.125118519871964,0,0,0,0.45071417671979,0.113432183160021,0,0.213557388818567,0.635795703478686,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.194874010322397,0.252433774244115,0.276149695926898,0.323292113637624,0,0,0.169560592310488,0.193260853163297,0,0.286804595389004,0,0,0.116193942869518,0.310983165046111,0.252320850875628,0.36497735907583,0,2.57296375277154,0,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0.246217006087397,0.702012795417713,0.594524649154913,0,0.16798212819886,0,0.179117045405697,0,0,1.47798971368783,0.176096868026452,0.829312462163088,0.864719720501769,0.75745460055828,0,0.763976851116555,0,0,0,0,0.285826432630578,0,0.43596006883328,0.1466765716419,0,3.57656445851882,0,0.531876233169741,0,0,0,0,0,1.62786481617433,0,0,0.355391948742546,0,2.41151501647669,0,0.899756920638513,2.43247561282381,1.00451418286425,2.10833939483032,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0.197030760201927,0,0.256686072559497,1.01637849688985,0,0,0,0,5.99205619157746,23.932916736322,1.65766205374414,0.49076596687656,1.00034104211935,0.271265023699736,0.207970861530807,0,0.315404830067869,0,0,0,0,0,0.553107505625109,0.0868836144680828,0.391602314925481,0.686286847621712,0.413536052245775,0.647142602455851,0.320182673410333,0.303127571446259,0,0.604780586659361,0.744323423456331,0.460385919864187,1.68396056659844,0.896974044789907,1.02341449813341,0.64341568457443,0,0.308419387605311,0.355123450626254,0.0821271560138091,1.03850885836724,0.232420756919918,0.725156697549733,1.20303882181971,1.10497186723076,0.114814448164607,0.182091168006717,0.917870904715969,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,0.412164046590889,0.183138929636687,0.082509499920588,0,0,0,0.48335359146061,0.154048617114644,0.307007349452259,0.137836572484531,0.322260734604821,0.145016693914229,0.255679882248303,0,0.330569830721956,0.768760269460425,0,0.708104465988849,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0.38126038784765,0,0,0.318203247925937,0.78494864019923,0.179872457583315,0.823611089208164,0.353437207037059,0,0,0,0,0,1.05650146756755,0.136499911407986,0.424216295861138,1.13008116620243,0,0,0.438450885253763,0.578775534266688,0,0,0.6196469961995,0,0,0.0982490410131212,0,0,0.633322905892992,0.329294892959902,0,0,0.192444225451024,0,0,0.753150406214233,1.29151611801369,0,0.443430153536676,0,0,0.764637207142375,0.569647187174163,0.714695326373367,0.822724546172388,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0.142283686696828,0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| |||
|short_description=p18@CEBPB | |||
}} |
Revision as of 12:01, 21 January 2014
Short description: | p18@CEBPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_CEBPB_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 29bp_to_D63161_5end |
EntrezGene: | CEBPB |
HGNC: | 1834 |
UniProt: | Q99557 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.23e-74 | 48 |
phagocyte | 6.23e-74 | 48 |
classical monocyte | 3.23e-73 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.23e-73 | 42 |
myeloid leukocyte | 1.68e-61 | 72 |
monopoietic cell | 8.88e-57 | 59 |
monocyte | 8.88e-57 | 59 |
monoblast | 8.88e-57 | 59 |
promonocyte | 8.88e-57 | 59 |
macrophage dendritic cell progenitor | 1.44e-54 | 61 |
myeloid lineage restricted progenitor cell | 2.27e-52 | 66 |
granulocyte monocyte progenitor cell | 2.01e-51 | 67 |
myeloid cell | 7.29e-37 | 108 |
common myeloid progenitor | 7.29e-37 | 108 |
leukocyte | 1.03e-26 | 136 |
nongranular leukocyte | 7.87e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 8.74e-24 | 120 |
hematopoietic oligopotent progenitor cell | 1.16e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.16e-20 | 161 |
hematopoietic stem cell | 2.70e-19 | 168 |
hematopoietic cell | 1.06e-17 | 177 |
connective tissue cell | 2.15e-12 | 361 |
mesenchymal cell | 2.76e-12 | 354 |
motile cell | 1.66e-10 | 386 |
somatic stem cell | 4.74e-10 | 433 |
multi fate stem cell | 7.82e-10 | 427 |
stem cell | 1.40e-09 | 441 |
neutrophil | 7.72e-09 | 3 |
granulocyte | 5.46e-08 | 8 |
adipocyte of omentum tissue | 1.81e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.10e-44 | 76 |
bone element | 5.57e-40 | 82 |
skeletal element | 2.63e-37 | 90 |
immune system | 6.31e-34 | 93 |
hematopoietic system | 1.58e-33 | 98 |
blood island | 1.58e-33 | 98 |
skeletal system | 1.97e-32 | 100 |
hemolymphoid system | 2.30e-29 | 108 |
musculoskeletal system | 6.31e-18 | 167 |
lateral plate mesoderm | 1.62e-14 | 203 |
connective tissue | 1.20e-11 | 371 |
mesoderm | 7.10e-11 | 315 |
mesoderm-derived structure | 7.10e-11 | 315 |
presumptive mesoderm | 7.10e-11 | 315 |