FFCP PHASE1:Hg19::chr2:171673417..171673422,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2571 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4092 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000344257_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_6_at_GAD1_5end | |||
|id=chr2:171673417..171673422,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;7.33e-12;2!UBERON:0006601;8.88e-12;82 | |||
|ontology_enrichment_disease=DOID:305!1.23e-11!106;DOID:0050687!2.75e-09!143;DOID:162!6.38e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.30e-41!82;UBERON:0005743!1.92e-39!86;UBERON:0001049!2.18e-39!57;UBERON:0005068!2.18e-39!57;UBERON:0006241!2.18e-39!57;UBERON:0007135!2.18e-39!57;UBERON:0000955!3.59e-36!69;UBERON:0006238!3.59e-36!69;UBERON:0002780!1.45e-34!41;UBERON:0001890!1.45e-34!41;UBERON:0006240!1.45e-34!41;UBERON:0000073!6.61e-34!94;UBERON:0001016!6.61e-34!94;UBERON:0002616!1.24e-33!59;UBERON:0003080!1.86e-33!42;UBERON:0001869!2.02e-33!32;UBERON:0001893!3.47e-33!34;UBERON:0002020!8.19e-33!34;UBERON:0003528!8.19e-33!34;UBERON:0002791!8.37e-32!33;UBERON:0003075!5.16e-27!86;UBERON:0007284!5.16e-27!86;UBERON:0002346!2.81e-26!90;UBERON:0002619!6.47e-26!22;UBERON:0000956!3.69e-24!25;UBERON:0000203!3.69e-24!25;UBERON:0001950!1.88e-23!20;UBERON:0003056!5.46e-22!61;UBERON:0000033!1.55e-18!123;UBERON:0000153!1.21e-17!129;UBERON:0007811!1.21e-17!129;UBERON:0007023!4.90e-16!115;UBERON:0004121!6.82e-15!169;UBERON:0000924!8.36e-15!173;UBERON:0006601!8.36e-15!173;UBERON:0000064!6.55e-11!219;UBERON:0002420!1.71e-10!9;UBERON:0007245!1.71e-10!9;UBERON:0010009!1.71e-10!9;UBERON:0010011!1.71e-10!9;UBERON:0000454!1.71e-10!9;UBERON:0002308!4.92e-10!9;UBERON:0000125!4.92e-10!9;UBERON:0000200!2.16e-09!6;UBERON:0001871!6.83e-09!7;UBERON:0002021!3.79e-08!5;UBERON:0001737!4.40e-08!9;UBERON:0009663!5.14e-08!7;UBERON:0000349!5.89e-08!5;UBERON:0000025!1.46e-07!194;UBERON:0003076!1.76e-07!15;UBERON:0003057!1.76e-07!15;UBERON:0000369!2.52e-07!4;UBERON:0002435!2.52e-07!4;UBERON:0000204!2.52e-07!4;UBERON:0010082!2.52e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.02e-64;32!UBERON:0002791;1.66e-60;32!UBERON:0001893;1.46e-57;34!UBERON:0003528;1.01e-53;34!UBERON:0002020;1.01e-53;34!UBERON:0002619;6.53e-53;22!UBERON:0001950;2.99e-51;20!UBERON:0002780;1.45e-46;41!UBERON:0001890;1.45e-46;41!UBERON:0000956;2.15e-46;25!UBERON:0000203;2.15e-46;25!UBERON:0000073;1.35e-28;53!UBERON:0002616;1.35e-28;53!UBERON:0000955;6.67e-28;68!UBERON:0001017;1.10e-26;75!UBERON:0000369;1.65e-21;4!UBERON:0002435;1.65e-21;4!UBERON:0000204;1.65e-21;4!UBERON:0001016;1.74e-20;83!UBERON:0002420;2.42e-20;9!UBERON:0007245;2.42e-20;9!UBERON:0010009;2.42e-20;9!UBERON:0010011;2.42e-20;9!UBERON:0000454;2.42e-20;9!UBERON:0009663;9.57e-19;7!UBERON:0001872;7.00e-17;5!UBERON:0005383;1.09e-16;3!UBERON:0005382;1.09e-16;3!UBERON:0002021;1.71e-16;5!UBERON:0000125;1.59e-14;9!UBERON:0002308;1.59e-14;9!UBERON:0000200;7.39e-14;6!UBERON:0001873;7.33e-12;2!UBERON:0001871;1.67e-11;6!UBERON:0000349;1.60e-09;5!UBERON:0007023;3.01e-09;114!UBERON:0011216;7.09e-09;132!UBERON:0001870;7.02e-08;3!UBERON:0002902;9.28e-07;1!UBERON:0002022;9.28e-07;1!UBERON:0009899;9.28e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,4.47e-70,32;UBERON:0001893,8.71e-66,34;UBERON:0002780,1.33e-64,41;UBERON:0001890,1.33e-64,41;UBERON:0003080,1.33e-64,41;UBERON:0006240,1.33e-64,41;UBERON:0002791,1.45e-63,32;UBERON:0003528,1.17e-59,34;UBERON:0002020,1.17e-59,34;UBERON:0000073,1.12e-53,53;UBERON:0002616,1.12e-53,53;UBERON:0002619,6.38e-53,22;UBERON:0001017,1.21e-52,81;UBERON:0000955,1.86e-51,68;UBERON:0006238,1.86e-51,68;UBERON:0001950,3.25e-51,20;UBERON:0001049,1.48e-50,56;UBERON:0005068,1.48e-50,56;UBERON:0006241,1.48e-50,56;UBERON:0007135,1.48e-50,56;UBERON:0001016,7.35e-47,89;UBERON:0000956,2.11e-46,25;UBERON:0000203,2.11e-46,25;UBERON:0003056,5.10e-42,61;UBERON:0003075,5.82e-33,82;UBERON:0007284,5.82e-33,82;UBERON:0002346,3.46e-31,86;UBERON:0010371,7.05e-25,104;UBERON:0007023,1.11e-24,114;UBERON:0004121,1.09e-21,171;UBERON:0000924,1.09e-21,171;UBERON:0006601,1.09e-21,171;UBERON:0000369,1.84e-21,4;UBERON:0002435,1.84e-21,4;UBERON:0000204,1.84e-21,4;UBERON:0010082,1.84e-21,4;UBERON:0011216,1.33e-20,223;UBERON:0002420,2.87e-20,9;UBERON:0007245,2.87e-20,9;UBERON:0010009,2.87e-20,9;UBERON:0010011,2.87e-20,9;UBERON:0000454,2.87e-20,9;UBERON:0010314,3.16e-20,132;UBERON:0009663,1.20e-18,7;UBERON:0001872,8.96e-17,5;UBERON:0005383,9.33e-17,3;UBERON:0005382,9.33e-17,3;UBERON:0002021,1.58e-16,5;UBERON:0000125,1.88e-14,9;UBERON:0002308,1.88e-14,9;UBERON:0000200,5.49e-14,6;UBERON:0000025,4.10e-12,192;UBERON:0001873,8.17e-12,2;UBERON:0010122,8.17e-12,2;UBERON:0001871,1.38e-11,6;UBERON:0000349,1.65e-09,5;UBERON:0004111,1.40e-08,240;UBERON:0001870,7.79e-08,3;UBERON:0002902,9.30e-07,1;UBERON:0009899,9.30e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0.365921118388786,0,0.232387885739037,0.310983165046111,0.252320850875628,0.72995471815166,0,0,0,0,0,0.236613600079688,0.168584690078102,0.723033089650446,0.330881918197182,0.435758888184812,0.237270619111097,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0.335964256397719,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,0,1.54657762555539,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0.99921590399346,2.81974010175699,0.561421621224659,0,0,0,0.284136146806413,0,0,0,0.994147647766298,1.54736358051564,0,0.16480387422676,0,0,0,0.503865495708552,0.20453736500431,0,0,0,0,0,0,0,0,3.87733098438087,1.57705766875147,3.99227596002388,0,0,0,0,0,0,0,1.16641845353302,0.173624994933292,3.54296554325536,3.0149109656352,4.5774520895125,0.995213339381022,0.295547618953547,1.53569778007781,0,0.41827123283581,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,1.32969345520125,0,0,0,0,0,0,0.816164040795739,0.141353071433941,0.216388639742091,0,0,0,0,0.370691816839509,0.730953646538188,0.404406797884062,0,1.63985112007737,0,0.19566461893209,0.242780379534093,0,0,1.22429104652196,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0.694238953340524,0,0,0,0,0,0.0730893170861856,0.164230914106418,0,0,0,0.137041924646751,0,2.40581024632339,0.195551382734803,0,0,0,0,1.71804894248874,0.686379991447858,0,0,0,0,0.209205692624666,0,0,2.40168115483916,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,1.59045937961861,0.681017030557878,0.643012593860077,0,0,0,0,3.03747783290123,0,0.0788057072991982,0.104909176269996,0.211200673038813,0,0.191915197319445,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.646414781807753,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,2.65820453990096,1.95242023843141,0.500763722825999,0,0.332787154610557,0.558867626472451,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0.192619830407303,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,2.376481328569,2.8339315265117,0.478901577171454,1.64093091392604,1.00828678488687,3.25039086581824,1.77623210195036,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0.147856086217045,2.70150338473579,0,2.06686796501184,2.40980078736846,2.7348740450911,0,0,0,0.383287282918786,0,0,0,0.682986574053893,0,0,0.342976018874837,0.339848664884159,2.43359262182542,0,0,0,2.82808061848803,0,0,0.215927591218621,0,0.142953088353313,0.47404083519818,0.581207126840626,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0.233939463462106,0.397901550322736,0,0,0,0.754814217833368,0,0,0.470317296361523,0,0,0.392616934229891,0,0.8453114551668,0,0,0,0.199882311849858,0,0,0.160482733378337,0,0,0,1.10440093535229,2.71965960763659,3.05445483238264,0,0,0,0,0.126166424835079,0,0.253397002022874,0,0,0,0,0,0,1.65833887891756,0.724030971033267,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.244209805832924,0.106727345877715,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p6@GAD1 | |||
}} |
Revision as of 06:33, 21 January 2014
Short description: | p6@GAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GAD1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000344257_5end |
EntrezGene: | GAD1 |
HGNC: | 4092 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data