FFCP PHASE1:Hg19::chr2:55646957..55647027,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55704 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25523 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000263630,ENST00000471947_5end | |||
|description=CAGE_peak_1_at_CCDC88A_5end | |||
|id=chr2:55646957..55647027,- | |||
|ontology_enrichment_celltype=CL:0000557!1.07e-19!71;CL:0000763!1.88e-19!112;CL:0000049!1.88e-19!112;CL:0000839!2.85e-18!70;CL:0002009!1.63e-17!65;CL:0002194!6.54e-17!63;CL:0000576!6.54e-17!63;CL:0000040!6.54e-17!63;CL:0000559!6.54e-17!63;CL:0000766!1.67e-13!76;CL:0002057!1.38e-11!42;CL:0000860!1.48e-11!45 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.83e-11;39!CL:0000234;3.83e-11;39!CL:0000860;1.47e-10;33!CL:0002057;1.47e-10;33!CL:0000576;1.48e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,8.92e-20,67;CL:0000763,2.42e-19,108;CL:0000049,2.42e-19,108;CL:0000839,2.56e-18,66;CL:0002009,1.39e-17,61;CL:0002194,5.59e-17,59;CL:0000576,5.59e-17,59;CL:0000040,5.59e-17,59;CL:0000559,5.59e-17,59;CL:0000473,3.31e-14,48;CL:0000234,3.31e-14,48;CL:0000766,1.97e-13,72;CL:0000860,1.37e-11,42;CL:0002057,1.37e-11,42 | |||
|ontology_enrichment_development_v019=CL:0002057;7.50e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.26e-27!82;UBERON:0001049!5.59e-26!57;UBERON:0005068!5.59e-26!57;UBERON:0006241!5.59e-26!57;UBERON:0007135!5.59e-26!57;UBERON:0000073!9.94e-26!94;UBERON:0001016!9.94e-26!94;UBERON:0005743!1.30e-25!86;UBERON:0000955!6.06e-23!69;UBERON:0006238!6.06e-23!69;UBERON:0002780!2.09e-22!41;UBERON:0001890!2.09e-22!41;UBERON:0006240!2.09e-22!41;UBERON:0002616!5.03e-22!59;UBERON:0003080!5.89e-22!42;UBERON:0002020!1.06e-19!34;UBERON:0003528!1.06e-19!34;UBERON:0002346!1.11e-19!90;UBERON:0001893!1.22e-19!34;UBERON:0003075!1.87e-19!86;UBERON:0007284!1.87e-19!86;UBERON:0002791!3.92e-19!33;UBERON:0001869!2.19e-18!32;UBERON:0002371!8.12e-17!80;UBERON:0001474!2.12e-16!86;UBERON:0004765!1.92e-15!101;UBERON:0001434!1.92e-15!101;UBERON:0003056!2.86e-15!61;UBERON:0000956!1.29e-14!25;UBERON:0000203!1.29e-14!25;UBERON:0007023!5.29e-14!115;UBERON:0002619!7.97e-14!22;UBERON:0002390!6.30e-13!102;UBERON:0003061!6.30e-13!102;UBERON:0001950!1.01e-12!20;UBERON:0000033!2.33e-12!123;UBERON:0000153!3.62e-12!129;UBERON:0007811!3.62e-12!129;UBERON:0000924!7.24e-12!173;UBERON:0006601!7.24e-12!173;UBERON:0002405!8.15e-12!115;UBERON:0004121!1.65e-11!169;UBERON:0002193!1.23e-10!112;UBERON:0000922!5.27e-10!612;UBERON:0000062!3.08e-09!511;UBERON:0002204!1.76e-08!167;UBERON:0002050!1.93e-08!605;UBERON:0005423!1.93e-08!605;UBERON:0000923!3.01e-08!604;UBERON:0005291!3.01e-08!604;UBERON:0006598!3.01e-08!604;UBERON:0002532!3.01e-08!604;UBERON:0000468!4.77e-07!659;UBERON:0000480!5.41e-07!626;UBERON:0000467!6.79e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.84e-17;34!UBERON:0003528;5.88e-17;34!UBERON:0002020;5.88e-17;34!UBERON:0002791;6.25e-17;32!UBERON:0001869;8.22e-17;32!UBERON:0002780;2.16e-16;41!UBERON:0001890;2.16e-16;41!UBERON:0000956;1.22e-14;25!UBERON:0000203;1.22e-14;25!UBERON:0000073;2.13e-14;53!UBERON:0002616;2.13e-14;53!UBERON:0002619;7.53e-14;22!UBERON:0001950;9.66e-13;20!UBERON:0000955;2.49e-11;68!UBERON:0001017;1.68e-10;75!UBERON:0001016;3.55e-10;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.18e-27,81;UBERON:0001016,1.33e-27,89;UBERON:0001049,2.24e-26,56;UBERON:0005068,2.24e-26,56;UBERON:0006241,2.24e-26,56;UBERON:0007135,2.24e-26,56;UBERON:0000073,1.40e-24,53;UBERON:0002616,1.40e-24,53;UBERON:0000955,3.18e-23,68;UBERON:0006238,3.18e-23,68;UBERON:0002780,2.06e-22,41;UBERON:0001890,2.06e-22,41;UBERON:0003080,2.06e-22,41;UBERON:0006240,2.06e-22,41;UBERON:0003528,1.04e-19,34;UBERON:0002020,1.04e-19,34;UBERON:0001893,1.20e-19,34;UBERON:0002346,1.23e-19,86;UBERON:0003075,2.00e-19,82;UBERON:0007284,2.00e-19,82;UBERON:0002791,1.53e-18,32;UBERON:0001869,2.17e-18,32;UBERON:0002371,9.28e-17,76;UBERON:0001474,2.64e-16,82;UBERON:0003056,4.81e-16,61;UBERON:0004765,2.27e-15,90;UBERON:0001434,3.46e-15,100;UBERON:0000956,1.28e-14,25;UBERON:0000203,1.28e-14,25;UBERON:0002619,7.90e-14,22;UBERON:0007023,1.39e-13,114;UBERON:0002405,1.88e-13,93;UBERON:0010314,4.47e-13,132;UBERON:0002390,9.34e-13,98;UBERON:0003061,9.34e-13,98;UBERON:0001950,1.00e-12,20;UBERON:0010371,1.71e-12,104;UBERON:0004121,1.36e-11,171;UBERON:0000924,1.36e-11,171;UBERON:0006601,1.36e-11,171;UBERON:0002193,2.02e-10,108;UBERON:0011216,7.13e-10,223;UBERON:0000922,9.54e-09,592;UBERON:0002204,1.87e-08,167;UBERON:0000923,1.19e-07,560;UBERON:0010316,1.19e-07,560;UBERON:0005291,1.19e-07,560;UBERON:0006598,1.19e-07,560;UBERON:0010317,1.19e-07,560;UBERON:0002532,1.19e-07,560;UBERON:0002050,1.31e-07,564;UBERON:0005423,5.33e-07,581 | |||
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| |||
|short_description=p1@CCDC88A | |||
}} |
Revision as of 03:15, 21 January 2014
Short description: | p1@CCDC88A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC88A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000263630, ENST00000471947_5end |
EntrezGene: | CCDC88A |
HGNC: | 25523 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 8.92e-20 | 67 |
myeloid cell | 2.42e-19 | 108 |
common myeloid progenitor | 2.42e-19 | 108 |
myeloid lineage restricted progenitor cell | 2.56e-18 | 66 |
macrophage dendritic cell progenitor | 1.39e-17 | 61 |
monopoietic cell | 5.59e-17 | 59 |
monocyte | 5.59e-17 | 59 |
monoblast | 5.59e-17 | 59 |
promonocyte | 5.59e-17 | 59 |
defensive cell | 3.31e-14 | 48 |
phagocyte | 3.31e-14 | 48 |
myeloid leukocyte | 1.97e-13 | 72 |
classical monocyte | 1.37e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.37e-11 | 42 |