FFCP PHASE1:Mm9::chr11:70400659..70400662,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=34|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:70400659..70400662,-|id=chr11:70400659..70400662,-|ontology_enrichment_celltype=CL:0000049!1.90e-14!19;CL:0000988!1.37e-13!32;CL:0002032!1.37e-13!32;CL:0000037!1.37e-13!32;CL:0000566!1.37e-13!32;CL:0000837!1.37e-13!32;CL:0002320!5.74e-11!46;CL:0000134!5.74e-11!46;CL:0000219!1.02e-09!54;CL:0000763!1.63e-09!16;CL:0000553!1.33e-08!6;CL:0000556!1.33e-08!6;CL:0000063!3.71e-08!66|ontology_enrichment_celltype_v019_2=CL:0000049,5.01e-20,19;CL:0000557,3.25e-18,7;CL:0000988,9.02e-12,32;CL:0002032,9.02e-12,32;CL:0000037,9.02e-12,32;CL:0000837,9.02e-12,32;CL:0002320,1.74e-10,46;CL:0000134,1.74e-10,46;CL:0000034,2.81e-09,97;CL:0000213,4.39e-09,1;CL:0002078,4.39e-09,1;CL:0000115,4.39e-09,1;CL:0002262,4.39e-09,1;CL:1000398,4.39e-09,1;CL:0000219,7.51e-09,54;CL:0000763,3.70e-08,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.61e-13!45;UBERON:0003061!2.61e-13!45;UBERON:0002193!3.64e-12!48;UBERON:0002371!7.50e-12!16;UBERON:0002384!5.74e-11!46;UBERON:0001474!8.87e-10!22;UBERON:0004765!8.87e-10!22;UBERON:0001434!8.87e-10!22;UBERON:0002405!7.82e-08!70|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.74e-10,46;UBERON:0002394,4.39e-09,1;UBERON:0001281,4.39e-09,1;UBERON:0000353,4.39e-09,1;UBERON:0003497,4.39e-09,1;UBERON:0003909,4.39e-09,1;UBERON:0003928,4.39e-09,1;UBERON:0003835,4.39e-09,1;UBERON:0003513,4.39e-09,1;UBERON:0001280,4.39e-09,1;UBERON:0004647,4.39e-09,1;UBERON:0002294,4.39e-09,1;UBERON:0001173,4.39e-09,1;UBERON:0004912,4.39e-09,1;UBERON:0005171,4.39e-09,1;UBERON:0002371,3.70e-08,16|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0.563154888606667,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.630924330716475,0.822686601634433,0.42438965179803,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,6.37701875143691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,9.34557971146178,18.5969846607956,7.49714339731082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6398373716382,9.26452465612975,3.12579849335152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.44292937929755,0,0.163863314715738,0.172684981865896,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.1656644287649,27.7103875600843,21.835595861099,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.51968329191118,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0.201652370273681,0,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:70400659..70400662,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=34 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:70400659..70400662,- | |||
|description=CAGE_peak_at_chr11:70400659..70400662,- | |||
|id=chr11:70400659..70400662,- | |||
|ontology_enrichment_celltype=CL:0000049!1.90e-14!19;CL:0000988!1.37e-13!32;CL:0002032!1.37e-13!32;CL:0000037!1.37e-13!32;CL:0000566!1.37e-13!32;CL:0000837!1.37e-13!32;CL:0002320!5.74e-11!46;CL:0000134!5.74e-11!46;CL:0000219!1.02e-09!54;CL:0000763!1.63e-09!16;CL:0000553!1.33e-08!6;CL:0000556!1.33e-08!6;CL:0000063!3.71e-08!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,5.01e-20,19;CL:0000557,3.25e-18,7;CL:0000988,9.02e-12,32;CL:0002032,9.02e-12,32;CL:0000037,9.02e-12,32;CL:0000837,9.02e-12,32;CL:0002320,1.74e-10,46;CL:0000134,1.74e-10,46;CL:0000034,2.81e-09,97;CL:0000213,4.39e-09,1;CL:0002078,4.39e-09,1;CL:0000115,4.39e-09,1;CL:0002262,4.39e-09,1;CL:1000398,4.39e-09,1;CL:0000219,7.51e-09,54;CL:0000763,3.70e-08,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.61e-13!45;UBERON:0003061!2.61e-13!45;UBERON:0002193!3.64e-12!48;UBERON:0002371!7.50e-12!16;UBERON:0002384!5.74e-11!46;UBERON:0001474!8.87e-10!22;UBERON:0004765!8.87e-10!22;UBERON:0001434!8.87e-10!22;UBERON:0002405!7.82e-08!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.74e-10,46;UBERON:0002394,4.39e-09,1;UBERON:0001281,4.39e-09,1;UBERON:0000353,4.39e-09,1;UBERON:0003497,4.39e-09,1;UBERON:0003909,4.39e-09,1;UBERON:0003928,4.39e-09,1;UBERON:0003835,4.39e-09,1;UBERON:0003513,4.39e-09,1;UBERON:0001280,4.39e-09,1;UBERON:0004647,4.39e-09,1;UBERON:0002294,4.39e-09,1;UBERON:0001173,4.39e-09,1;UBERON:0004912,4.39e-09,1;UBERON:0005171,4.39e-09,1;UBERON:0002371,3.70e-08,16 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0.563154888606667,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.630924330716475,0.822686601634433,0.42438965179803,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,6.37701875143691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,9.34557971146178,18.5969846607956,7.49714339731082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6398373716382,9.26452465612975,3.12579849335152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.44292937929755,0,0.163863314715738,0.172684981865896,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.1656644287649,27.7103875600843,21.835595861099,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.51968329191118,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0.201652370273681,0,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:70400659..70400662,- | |||
}} |
Latest revision as of 21:18, 3 August 2015
Short description: | p@chr11:70400659..70400662, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:70400659..70400662, - |
Coexpression cluster: | MCL_coexpression_mm9:34 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 5.01e-20 | 19 |
granulocyte monocyte progenitor cell | 3.25e-18 | 7 |
hematopoietic cell | 9.02e-12 | 32 |
hematopoietic oligopotent progenitor cell | 9.02e-12 | 32 |
hematopoietic stem cell | 9.02e-12 | 32 |
hematopoietic multipotent progenitor cell | 9.02e-12 | 32 |
connective tissue cell | 1.74e-10 | 46 |
mesenchymal cell | 1.74e-10 | 46 |
stem cell | 2.81e-09 | 97 |
lining cell | 4.39e-09 | 1 |
meso-epithelial cell | 4.39e-09 | 1 |
endothelial cell | 4.39e-09 | 1 |
endothelial cell of sinusoid | 4.39e-09 | 1 |
endothelial cell of hepatic sinusoid | 4.39e-09 | 1 |
motile cell | 7.51e-09 | 54 |
myeloid cell | 3.70e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.74e-10 | 46 |
bile duct | 4.39e-09 | 1 |
hepatic sinusoid | 4.39e-09 | 1 |
parenchyma | 4.39e-09 | 1 |
abdomen blood vessel | 4.39e-09 | 1 |
sinusoid | 4.39e-09 | 1 |
digestive system duct | 4.39e-09 | 1 |
abdominal segment blood vessel | 4.39e-09 | 1 |
trunk blood vessel | 4.39e-09 | 1 |
liver parenchyma | 4.39e-09 | 1 |
liver lobule | 4.39e-09 | 1 |
biliary system | 4.39e-09 | 1 |
biliary tree | 4.39e-09 | 1 |
biliary bud | 4.39e-09 | 1 |
hepatic duct | 4.39e-09 | 1 |
bone marrow | 3.70e-08 | 16 |