FFCP PHASE1:Hg19::chr4:38665769..38665801,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51274 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16516 | |||
|TSSclassifier=strong | |||
|UniProt=P57682 | |||
|association_with_transcript=0bp_to_NM_016531,uc003gtg.2,uc003gth.3_5end | |||
|coexpression_cluster_id=C175 | |||
|description=CAGE_peak_2_at_KLF3_5end | |||
|id=chr4:38665769..38665801,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.80e-20!42;CL:0000860!5.86e-18!45;CL:0000738!1.57e-15!140;CL:0000766!1.37e-14!76;CL:0000037!2.26e-12!172;CL:0000566!2.26e-12!172;CL:0002031!4.82e-12!124;CL:0002087!7.28e-12!119;CL:0000839!1.81e-11!70;CL:0002032!7.37e-11!165;CL:0000837!7.37e-11!165;CL:0000557!1.88e-10!71;CL:0002194!1.95e-10!63;CL:0000576!1.95e-10!63;CL:0000040!1.95e-10!63;CL:0000559!1.95e-10!63;CL:0000988!2.27e-10!182;CL:0002009!4.48e-10!65;CL:0000791!9.03e-10!18;CL:0000789!9.03e-10!18;CL:0002420!9.03e-10!18;CL:0002419!9.03e-10!18;CL:0000790!9.03e-10!18;CL:0000763!1.69e-09!112;CL:0000049!1.69e-09!112;CL:0000625!1.32e-07!11;CL:0000094!7.61e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.16e-14;33!CL:0002057;3.16e-14;33!CL:0000576;1.27e-10;48!CL:0000791;8.15e-10;18!CL:0000789;8.15e-10;18!CL:0002419;8.15e-10;18!CL:0000473;8.56e-10;39!CL:0000234;8.56e-10;39!CL:0000766;9.56e-09;69!CL:0000625;1.27e-07;11!CL:0000094;7.23e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.80e-20,42;CL:0002057,1.80e-20,42;CL:0000473,3.19e-17,48;CL:0000234,3.19e-17,48;CL:0000738,1.05e-16,136;CL:0000766,2.66e-16,72;CL:0000037,3.04e-13,168;CL:0002031,4.27e-13,120;CL:0000839,5.56e-13,66;CL:0002087,6.03e-13,115;CL:0002194,5.85e-12,59;CL:0000576,5.85e-12,59;CL:0000040,5.85e-12,59;CL:0000559,5.85e-12,59;CL:0000557,7.58e-12,67;CL:0002032,1.12e-11,161;CL:0000837,1.12e-11,161;CL:0002009,1.60e-11,61;CL:0000988,3.35e-11,177;CL:0000763,1.94e-10,108;CL:0000049,1.94e-10,108;CL:0000791,8.57e-10,18;CL:0000789,8.57e-10,18;CL:0002420,8.57e-10,18;CL:0002419,8.57e-10,18;CL:0000790,8.57e-10,18;CL:0000625,1.32e-07,11;CL:0000094,7.60e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.91e-15;42!CL:0000790;8.15e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.24e-11!112;UBERON:0002390!1.78e-11!102;UBERON:0003061!1.78e-11!102;UBERON:0002371!2.52e-08!80;UBERON:0001474!3.21e-08!86;UBERON:0002405!3.69e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.62e-13,108;UBERON:0002390,1.20e-12,98;UBERON:0003061,1.20e-12,98;UBERON:0002371,2.11e-09,76;UBERON:0001474,3.10e-09,82;UBERON:0002405,4.92e-09,93;UBERON:0004765,7.64e-08,90 | |||
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| |||
|short_description=p2@KLF3 | |||
}} |
Revision as of 00:41, 22 January 2014
Short description: | p2@KLF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KLF3_5end |
Coexpression cluster: | C175_Eosinophils_Neutrophils_CD4_Basophils_CD19_CD8_Natural |
Association with transcript: | 0bp_to_NM_016531, uc003gtg.2, uc003gth.3_5end |
EntrezGene: | KLF3 |
HGNC: | 16516 |
UniProt: | P57682 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.80e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.80e-20 | 42 |
defensive cell | 3.19e-17 | 48 |
phagocyte | 3.19e-17 | 48 |
leukocyte | 1.05e-16 | 136 |
myeloid leukocyte | 2.66e-16 | 72 |
hematopoietic stem cell | 3.04e-13 | 168 |
hematopoietic lineage restricted progenitor cell | 4.27e-13 | 120 |
myeloid lineage restricted progenitor cell | 5.56e-13 | 66 |
nongranular leukocyte | 6.03e-13 | 115 |
monopoietic cell | 5.85e-12 | 59 |
monocyte | 5.85e-12 | 59 |
monoblast | 5.85e-12 | 59 |
promonocyte | 5.85e-12 | 59 |
granulocyte monocyte progenitor cell | 7.58e-12 | 67 |
hematopoietic oligopotent progenitor cell | 1.12e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.12e-11 | 161 |
macrophage dendritic cell progenitor | 1.60e-11 | 61 |
hematopoietic cell | 3.35e-11 | 177 |
myeloid cell | 1.94e-10 | 108 |
common myeloid progenitor | 1.94e-10 | 108 |
mature alpha-beta T cell | 8.57e-10 | 18 |
alpha-beta T cell | 8.57e-10 | 18 |
immature T cell | 8.57e-10 | 18 |
mature T cell | 8.57e-10 | 18 |
immature alpha-beta T cell | 8.57e-10 | 18 |
CD8-positive, alpha-beta T cell | 1.32e-07 | 11 |
granulocyte | 7.60e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.62e-13 | 108 |
hematopoietic system | 1.20e-12 | 98 |
blood island | 1.20e-12 | 98 |
bone marrow | 2.11e-09 | 76 |
bone element | 3.10e-09 | 82 |
immune system | 4.92e-09 | 93 |
skeletal element | 7.64e-08 | 90 |