FFCP PHASE1:Mm9::chr15:81230180..81230189,-: Difference between revisions
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{{FFCP|EntrezGene=70356|HGNC=|UniProt=Q99L47|association_with_transcript=-56bp_to_NM_133726,uc007wwl.1_5end|description=CAGE_peak_6_at_St13_5end|id=chr15:81230180..81230189,-|ontology_enrichment_celltype=CL:0000117!8.34e-13!23;CL:0000337!8.34e-13!23;CL:0000540!2.32e-09!33;CL:0000047!2.32e-09!33;CL:0000031!2.32e-09!33;CL:0000404!2.32e-09!33;CL:0000221!1.21e-08!44;CL:0000133!1.21e-08!44;CL:0002319!2.13e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.83e-28,23;CL:0000337,1.83e-28,23;CL:0000540,8.43e-20,33;CL:0000047,8.43e-20,33;CL:0000031,8.43e-20,33;CL:0000404,8.43e-20,33;CL:0002319,1.61e-16,43;CL:0000221,5.54e-16,44;CL:0000133,5.54e-16,44;CL:0000393,9.71e-16,39;CL:0000211,9.71e-16,39;CL:0002321,1.40e-08,70;CL:0002609,5.46e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.05e-15!75;UBERON:0001016!2.05e-15!75;UBERON:0001049!4.83e-15!52;UBERON:0005068!4.83e-15!52;UBERON:0006241!4.83e-15!52;UBERON:0007135!4.83e-15!52;UBERON:0001017!6.80e-15!73;UBERON:0005743!6.80e-15!73;UBERON:0000033!2.60e-14!63;UBERON:0002346!6.48e-14!71;UBERON:0003075!6.48e-14!71;UBERON:0007284!6.48e-14!71;UBERON:0000955!8.27e-14!50;UBERON:0006238!8.27e-14!50;UBERON:0002616!2.74e-13!49;UBERON:0004121!3.98e-13!102;UBERON:0000924!3.98e-13!102;UBERON:0006601!3.98e-13!102;UBERON:0002020!1.97e-11!34;UBERON:0007811!3.89e-10!86;UBERON:0003056!4.13e-10!49;UBERON:0003080!2.35e-09!40;UBERON:0002780!7.52e-09!39;UBERON:0001890!7.52e-09!39;UBERON:0006240!7.52e-09!39;UBERON:0000153!8.28e-09!94;UBERON:0002791!1.30e-08!29;UBERON:0003528!1.30e-08!29;UBERON:0001893!1.30e-08!29;UBERON:0003076!3.71e-07!12;UBERON:0003057!3.71e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.66e-25,73;UBERON:0001016,6.03e-24,75;UBERON:0000073,1.45e-23,54;UBERON:0002020,2.49e-22,34;UBERON:0001049,4.48e-21,52;UBERON:0005068,4.48e-21,52;UBERON:0006241,4.48e-21,52;UBERON:0007135,4.48e-21,52;UBERON:0004121,1.28e-16,95;UBERON:0000924,1.28e-16,95;UBERON:0006601,1.28e-16,95;UBERON:0003528,8.77e-16,29;UBERON:0002791,8.77e-16,29;UBERON:0001893,8.77e-16,29;UBERON:0002346,1.68e-15,64;UBERON:0003075,1.68e-15,64;UBERON:0007284,1.68e-15,64;UBERON:0000955,2.36e-15,47;UBERON:0006238,2.36e-15,47;UBERON:0002616,2.29e-14,46;UBERON:0003080,7.72e-13,40;UBERON:0010371,1.49e-12,73;UBERON:0002780,8.06e-12,39;UBERON:0001890,8.06e-12,39;UBERON:0006240,8.06e-12,39;UBERON:0002420,6.61e-10,8;UBERON:0007245,6.61e-10,8;UBERON:0010009,6.61e-10,8;UBERON:0010011,6.61e-10,8;UBERON:0000454,6.61e-10,8;UBERON:0002240,7.47e-10,6;UBERON:0005174,7.47e-10,6;UBERON:0001137,7.47e-10,6;UBERON:0003076,1.15e-09,12;UBERON:0003057,1.15e-09,12;UBERON:0003056,2.02e-09,49;UBERON:0010314,5.29e-09,92;UBERON:0001948,8.86e-09,5;UBERON:0002315,8.86e-09,5;UBERON:0000956,2.68e-08,21;UBERON:0001869,2.68e-08,21;UBERON:0000203,2.68e-08,21;UBERON:0000025,1.04e-07,114|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0.467225281191051,0.774739940649458,0.281577444303333,0,0.513653904676515,0.558405112967355,0,0.34968160967599,0.333109761815663,0,0,0,0.137114433605739,0.42438965179803,0.850432901510698,0.297872853602656,0,0.319984845586813,0,0,0.430761996159075,0.430942465371778,0,0,0,0,0.61506478758457,0,0.866554859253824,0.997407872150954,0.204169356262369,0,0,0,0.588231488031014,0,0,0.125896817975577,0,0.917733760808408,0.782391344348039,0.872100625521786,0.219686182734472,0,1.1198913730029,1.43752564364972,0.503347818173209,0,1.00828139742739,0,0,0,2.63011399117477,0,2.53532561402472,0,0,0,0,0,0,0,2.38486108309499,1.35005938331691,2.73422449756797,3.14216082844184,1.98781686856452,1.71487118900936,2.87536413054709,0.919218786610021,1.10115880999389,2.29837208553338,3.5329502648936,4.08847491963601,3.29355516968675,2.6045668527838,2.23346399201105,1.12552522006336,2.13917546887534,1.17851434189467,3.55929201997757,3.72798891650601,0.832988126665025,0.755715601067855,0.579728977403356,1.72084775396277,0.679971333707751,0.539703191637817,0,0.896053774194671,0.561777680527007,0.340860645156116,1.29893002301434,0,0.845060518660083,0,5.09610479413291,0,0.432982082022428,0,0,0.11418387971906,1.55362730188303,0.593768556259299,0.867426633830679,0,0.461230994512117,0.150722640552623,0.23517741427141,0.879666139307728,0,0.433798070759735,0,0.323533699894818,0.441683036920787,0.484875253135222,0,2.92780797011547,1.04723353406728,0.255457055208591,0.359445373517761,0.599902730993408,0.127070227073065,2.09706895166752,0,2.26177833803156,1.39059456153821,0.511430914660661,2.49345653471472,0.973447578406546,0.305518091550949,0.124406970610093,0.252722758433675,0.841767423545896,0.650602214813519,0.689706313300419,0.900310649026746,0.753524089178575,0.612328492361951,0.768682321709099,0.749613796477831,0,0.215567992932842,0.756424320671277,0.351902248327898,0,0.278047249225598,0,0.205782136407943,1.39323986772945,0,0.51469581422943,0.852490498186778,1.03562886267751,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0.462801338662135,0.93013577900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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:70356 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99L47 | |||
|association_with_transcript=-56bp_to_NM_133726,uc007wwl.1_5end | |||
|cluster_id=chr15:81230180..81230189,- | |||
|description=CAGE_peak_6_at_St13_5end | |||
|id=chr15:81230180..81230189,- | |||
|ontology_enrichment_celltype=CL:0000117!8.34e-13!23;CL:0000337!8.34e-13!23;CL:0000540!2.32e-09!33;CL:0000047!2.32e-09!33;CL:0000031!2.32e-09!33;CL:0000404!2.32e-09!33;CL:0000221!1.21e-08!44;CL:0000133!1.21e-08!44;CL:0002319!2.13e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.83e-28,23;CL:0000337,1.83e-28,23;CL:0000540,8.43e-20,33;CL:0000047,8.43e-20,33;CL:0000031,8.43e-20,33;CL:0000404,8.43e-20,33;CL:0002319,1.61e-16,43;CL:0000221,5.54e-16,44;CL:0000133,5.54e-16,44;CL:0000393,9.71e-16,39;CL:0000211,9.71e-16,39;CL:0002321,1.40e-08,70;CL:0002609,5.46e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.05e-15!75;UBERON:0001016!2.05e-15!75;UBERON:0001049!4.83e-15!52;UBERON:0005068!4.83e-15!52;UBERON:0006241!4.83e-15!52;UBERON:0007135!4.83e-15!52;UBERON:0001017!6.80e-15!73;UBERON:0005743!6.80e-15!73;UBERON:0000033!2.60e-14!63;UBERON:0002346!6.48e-14!71;UBERON:0003075!6.48e-14!71;UBERON:0007284!6.48e-14!71;UBERON:0000955!8.27e-14!50;UBERON:0006238!8.27e-14!50;UBERON:0002616!2.74e-13!49;UBERON:0004121!3.98e-13!102;UBERON:0000924!3.98e-13!102;UBERON:0006601!3.98e-13!102;UBERON:0002020!1.97e-11!34;UBERON:0007811!3.89e-10!86;UBERON:0003056!4.13e-10!49;UBERON:0003080!2.35e-09!40;UBERON:0002780!7.52e-09!39;UBERON:0001890!7.52e-09!39;UBERON:0006240!7.52e-09!39;UBERON:0000153!8.28e-09!94;UBERON:0002791!1.30e-08!29;UBERON:0003528!1.30e-08!29;UBERON:0001893!1.30e-08!29;UBERON:0003076!3.71e-07!12;UBERON:0003057!3.71e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.66e-25,73;UBERON:0001016,6.03e-24,75;UBERON:0000073,1.45e-23,54;UBERON:0002020,2.49e-22,34;UBERON:0001049,4.48e-21,52;UBERON:0005068,4.48e-21,52;UBERON:0006241,4.48e-21,52;UBERON:0007135,4.48e-21,52;UBERON:0004121,1.28e-16,95;UBERON:0000924,1.28e-16,95;UBERON:0006601,1.28e-16,95;UBERON:0003528,8.77e-16,29;UBERON:0002791,8.77e-16,29;UBERON:0001893,8.77e-16,29;UBERON:0002346,1.68e-15,64;UBERON:0003075,1.68e-15,64;UBERON:0007284,1.68e-15,64;UBERON:0000955,2.36e-15,47;UBERON:0006238,2.36e-15,47;UBERON:0002616,2.29e-14,46;UBERON:0003080,7.72e-13,40;UBERON:0010371,1.49e-12,73;UBERON:0002780,8.06e-12,39;UBERON:0001890,8.06e-12,39;UBERON:0006240,8.06e-12,39;UBERON:0002420,6.61e-10,8;UBERON:0007245,6.61e-10,8;UBERON:0010009,6.61e-10,8;UBERON:0010011,6.61e-10,8;UBERON:0000454,6.61e-10,8;UBERON:0002240,7.47e-10,6;UBERON:0005174,7.47e-10,6;UBERON:0001137,7.47e-10,6;UBERON:0003076,1.15e-09,12;UBERON:0003057,1.15e-09,12;UBERON:0003056,2.02e-09,49;UBERON:0010314,5.29e-09,92;UBERON:0001948,8.86e-09,5;UBERON:0002315,8.86e-09,5;UBERON:0000956,2.68e-08,21;UBERON:0001869,2.68e-08,21;UBERON:0000203,2.68e-08,21;UBERON:0000025,1.04e-07,114 | |||
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| |||
|short_description=p6@St13 | |||
}} |
Revision as of 16:32, 5 August 2015
Short description: | p6@St13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_St13_5end |
Coexpression cluster: | NA |
Association with transcript: | -56bp_to_NM_133726, uc007wwl.1_5end |
EntrezGene: | 70356 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.83e-28 | 23 |
neuroblast (sensu Vertebrata) | 1.83e-28 | 23 |
neuron | 8.43e-20 | 33 |
neuronal stem cell | 8.43e-20 | 33 |
neuroblast | 8.43e-20 | 33 |
electrically signaling cell | 8.43e-20 | 33 |
neural cell | 1.61e-16 | 43 |
ectodermal cell | 5.54e-16 | 44 |
neurectodermal cell | 5.54e-16 | 44 |
electrically responsive cell | 9.71e-16 | 39 |
electrically active cell | 9.71e-16 | 39 |
embryonic cell | 1.40e-08 | 70 |
neuron of cerebral cortex | 5.46e-07 | 6 |