FFCP PHASE1:Mm9::chr18:5591424..5591444,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=21417|HGNC=|MCL_coexpression_id=7|UniProt=Q64318|association_with_transcript=-413bp_to_ENSMUST00000025081,NM_011546_5end|description=CAGE_peak_5_at_Zeb1_5end|id=chr18:5591424..5591444,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,6.29e-08,1;CL:0002078,6.29e-08,1;CL:0000115,6.29e-08,1;CL:0002262,6.29e-08,1;CL:1000398,6.29e-08,1;CL:0000625,3.16e-07,1;CL:0000791,5.18e-07,9;CL:0000789,5.18e-07,9;CL:0002420,5.18e-07,9;CL:0002419,5.18e-07,9;CL:0000790,5.18e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,6.29e-08,1;UBERON:0001281,6.29e-08,1;UBERON:0000353,6.29e-08,1;UBERON:0003497,6.29e-08,1;UBERON:0003909,6.29e-08,1;UBERON:0003928,6.29e-08,1;UBERON:0003835,6.29e-08,1;UBERON:0003513,6.29e-08,1;UBERON:0001280,6.29e-08,1;UBERON:0004647,6.29e-08,1;UBERON:0002294,6.29e-08,1;UBERON:0001173,6.29e-08,1;UBERON:0004912,6.29e-08,1;UBERON:0005171,6.29e-08,1|phase1_expression=0,0,0,0,0,0,0,0.903863264091034,8.869689495555,9.59664557920173,0.68487187290202,0.717949430958028,0.342401459862411,0.174840804837995,0,0.404950534779652,0,0.157731082679119,0,0,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,1.00828139742739,0.257259436035947,0.573066879877513,1.54701627683233,0.202316460859598,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0.210324961351382,0,0.220868540951614,0.244981598429908,0,1.83843757322004,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0.15279824777681,0.294628585473668,0.427115042397309,0.372798891650601,0.37863096666592,0.982430281388212,3.18850937571846,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0.301445281105245,0.117588707135705,0,0,0.144599356919912,0,0.647067399789637,0.441683036920787,0,0,0.292780797011547,0.209446706813455,0,0.359445373517761,0,0,0.299581278809645,0.915001205637253,0.502617408451458,0.173824320192276,0,0,0.324482526135515,0.305518091550949,0,0,0,0.260240885925407,0,0.360124259610698,0.452114453507145,0.272145996605311,0.384341160854549,0.281105173679186,0.258703370739016,0,0,0,0,0,0.348252166522167,0.823128545631774,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0,0.465067889500816,0.536546802799238,0.700592054203017,0.987359099480883,1.14917224855367,0.972825714550269,0.877199924551994,0.658650345873152,0.536825675041487,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0.38992817423824,0.898819408654221,0,0.199141273254367,0,0,0,0,0.969762435838129,0.140271639780637,0.316182685621286,0.147610147979602,0.156998727841375,0.123397163921801,0.592905254174298,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,1.43768206527355,0,0.312037673114561,1.01031551178845,1.07638448113147,0,1.10851914099963,0,0,0.339490171550376,0.469380496577004,0.167506257441816,0.476087281772027,0.195133647857799,0.945810864637146,0.44292937929755,0.478364305972461,1.3109065177259,1.03610989119537,0.867894351489069,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0.646270193198397,0.238968797952552,0.222798674082394,0.849229592366497,0.404810701674894,0.584511715822624,0.395287777946524,0,0.425820255624806,0.534196811001766,0,0.824850614862677,0,0,0.604647113929502,0,0.590603785761546,0.307435147943927,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0,0.32977250588296,0.484393280087717,0.241251699712623,0,0.328281799490123,0.291480836629851,0.18542530201051,0.512612642393558,0.619160603889667,0.185194527369712,0,0.136694227721025,0,1.01987057996313,0.419854356970974,0,0,0,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0.247960367176008,0.26175594198403,0,0,0,0,0.330916980914195,0.194451188344048,0.129159823477731,0,0.352071715937262,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0,0.25984164595559,0,0.993406773906324,0.120195449519969,0,0.201932899896295,0.0762068066549998,0,0,0.192423683280659,0,0,0,0,0.167884616364078,0,0.187682475451182,0.549454872801795,0,0,0,0,0.572895513439397,0.859265911718438,0,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,0.25347929989024,0,0.468207537349412,0.256100609619477,0.17230640686684,0.952587382566147,0.695305955669133,0,0,0.294397840268795,0.342869252385415,0.70990322463735,0,0.581385666529314,0.282328141245992,0.338458431566706,0.365855945745545,0.526139422875686,0.543216455383447,0,0.711810108745045,0.886540341380071,0.409231043169689,0.619747364743864,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p5@Zeb1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:21417 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q64318 | |||
|association_with_transcript=-413bp_to_ENSMUST00000025081,NM_011546_5end | |||
|cluster_id=chr18:5591424..5591444,+ | |||
|description=CAGE_peak_5_at_Zeb1_5end | |||
|id=chr18:5591424..5591444,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,6.29e-08,1;CL:0002078,6.29e-08,1;CL:0000115,6.29e-08,1;CL:0002262,6.29e-08,1;CL:1000398,6.29e-08,1;CL:0000625,3.16e-07,1;CL:0000791,5.18e-07,9;CL:0000789,5.18e-07,9;CL:0002420,5.18e-07,9;CL:0002419,5.18e-07,9;CL:0000790,5.18e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,6.29e-08,1;UBERON:0001281,6.29e-08,1;UBERON:0000353,6.29e-08,1;UBERON:0003497,6.29e-08,1;UBERON:0003909,6.29e-08,1;UBERON:0003928,6.29e-08,1;UBERON:0003835,6.29e-08,1;UBERON:0003513,6.29e-08,1;UBERON:0001280,6.29e-08,1;UBERON:0004647,6.29e-08,1;UBERON:0002294,6.29e-08,1;UBERON:0001173,6.29e-08,1;UBERON:0004912,6.29e-08,1;UBERON:0005171,6.29e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0.903863264091034,8.869689495555,9.59664557920173,0.68487187290202,0.717949430958028,0.342401459862411,0.174840804837995,0,0.404950534779652,0,0.157731082679119,0,0,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,1.00828139742739,0.257259436035947,0.573066879877513,1.54701627683233,0.202316460859598,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0.210324961351382,0,0.220868540951614,0.244981598429908,0,1.83843757322004,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0.15279824777681,0.294628585473668,0.427115042397309,0.372798891650601,0.37863096666592,0.982430281388212,3.18850937571846,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0.301445281105245,0.117588707135705,0,0,0.144599356919912,0,0.647067399789637,0.441683036920787,0,0,0.292780797011547,0.209446706813455,0,0.359445373517761,0,0,0.299581278809645,0.915001205637253,0.502617408451458,0.173824320192276,0,0,0.324482526135515,0.305518091550949,0,0,0,0.260240885925407,0,0.360124259610698,0.452114453507145,0.272145996605311,0.384341160854549,0.281105173679186,0.258703370739016,0,0,0,0,0,0.348252166522167,0.823128545631774,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0,0.465067889500816,0.536546802799238,0.700592054203017,0.987359099480883,1.14917224855367,0.972825714550269,0.877199924551994,0.658650345873152,0.536825675041487,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0.38992817423824,0.898819408654221,0,0.199141273254367,0,0,0,0,0.969762435838129,0.140271639780637,0.316182685621286,0.147610147979602,0.156998727841375,0.123397163921801,0.592905254174298,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,1.43768206527355,0,0.312037673114561,1.01031551178845,1.07638448113147,0,1.10851914099963,0,0,0.339490171550376,0.469380496577004,0.167506257441816,0.476087281772027,0.195133647857799,0.945810864637146,0.44292937929755,0.478364305972461,1.3109065177259,1.03610989119537,0.867894351489069,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0.646270193198397,0.238968797952552,0.222798674082394,0.849229592366497,0.404810701674894,0.584511715822624,0.395287777946524,0,0.425820255624806,0.534196811001766,0,0.824850614862677,0,0,0.604647113929502,0,0.590603785761546,0.307435147943927,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0,0.32977250588296,0.484393280087717,0.241251699712623,0,0.328281799490123,0.291480836629851,0.18542530201051,0.512612642393558,0.619160603889667,0.185194527369712,0,0.136694227721025,0,1.01987057996313,0.419854356970974,0,0,0,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0.247960367176008,0.26175594198403,0,0,0,0,0.330916980914195,0.194451188344048,0.129159823477731,0,0.352071715937262,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0,0.25984164595559,0,0.993406773906324,0.120195449519969,0,0.201932899896295,0.0762068066549998,0,0,0.192423683280659,0,0,0,0,0.167884616364078,0,0.187682475451182,0.549454872801795,0,0,0,0,0.572895513439397,0.859265911718438,0,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,0.25347929989024,0,0.468207537349412,0.256100609619477,0.17230640686684,0.952587382566147,0.695305955669133,0,0,0.294397840268795,0.342869252385415,0.70990322463735,0,0.581385666529314,0.282328141245992,0.338458431566706,0.365855945745545,0.526139422875686,0.543216455383447,0,0.711810108745045,0.886540341380071,0.409231043169689,0.619747364743864,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p5@Zeb1 | |||
}} |
Revision as of 21:29, 5 August 2015
Short description: | p5@Zeb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Zeb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -413bp_to_ENSMUST00000025081, NM_011546_5end |
EntrezGene: | 21417 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 6.29e-08 | 1 |
meso-epithelial cell | 6.29e-08 | 1 |
endothelial cell | 6.29e-08 | 1 |
endothelial cell of sinusoid | 6.29e-08 | 1 |
endothelial cell of hepatic sinusoid | 6.29e-08 | 1 |
CD8-positive, alpha-beta T cell | 3.16e-07 | 1 |
mature alpha-beta T cell | 5.18e-07 | 9 |
alpha-beta T cell | 5.18e-07 | 9 |
immature T cell | 5.18e-07 | 9 |
mature T cell | 5.18e-07 | 9 |
immature alpha-beta T cell | 5.18e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 6.29e-08 | 1 |
hepatic sinusoid | 6.29e-08 | 1 |
parenchyma | 6.29e-08 | 1 |
abdomen blood vessel | 6.29e-08 | 1 |
sinusoid | 6.29e-08 | 1 |
digestive system duct | 6.29e-08 | 1 |
abdominal segment blood vessel | 6.29e-08 | 1 |
trunk blood vessel | 6.29e-08 | 1 |
liver parenchyma | 6.29e-08 | 1 |
liver lobule | 6.29e-08 | 1 |
biliary system | 6.29e-08 | 1 |
biliary tree | 6.29e-08 | 1 |
biliary bud | 6.29e-08 | 1 |
hepatic duct | 6.29e-08 | 1 |