FFCP PHASE1:Mm9::chr18:73975409..73975448,-: Difference between revisions
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{{FFCP|EntrezGene=107029|HGNC=|MCL_coexpression_id=13|UniProt=Q99KE1,Q3V2Y4|association_with_transcript=-363bp_to_ENSMUST00000025439,NM_145494,uc008fox.1,uc008foy.1,uc012beu.1_5end|description=CAGE_peak_2_at_Me2_5end|id=chr18:73975409..73975448,-|ontology_enrichment_celltype=CL:0000117!7.52e-10!23;CL:0000337!7.52e-10!23;CL:0000221!1.92e-09!44;CL:0000133!1.92e-09!44;CL:0002319!4.41e-09!43;CL:0000540!1.17e-08!33;CL:0000047!1.17e-08!33;CL:0000031!1.17e-08!33;CL:0000404!1.17e-08!33;CL:0000055!7.17e-07!50;CL:0000393!7.62e-07!39;CL:0000211!7.62e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.31e-10,23;CL:0000337,2.31e-10,23;CL:0000221,6.12e-10,44;CL:0000133,6.12e-10,44;CL:0002319,1.55e-09,43;CL:0000540,3.22e-09,33;CL:0000047,3.22e-09,33;CL:0000031,3.22e-09,33;CL:0000404,3.22e-09,33;CL:0000393,1.35e-07,39;CL:0000211,1.35e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.80e-23!73;UBERON:0005743!1.80e-23!73;UBERON:0000073!2.40e-23!75;UBERON:0001016!2.40e-23!75;UBERON:0001049!7.71e-23!52;UBERON:0005068!7.71e-23!52;UBERON:0006241!7.71e-23!52;UBERON:0007135!7.71e-23!52;UBERON:0002616!1.18e-21!49;UBERON:0000955!1.46e-21!50;UBERON:0006238!1.46e-21!50;UBERON:0002346!3.37e-19!71;UBERON:0003075!3.37e-19!71;UBERON:0007284!3.37e-19!71;UBERON:0000033!1.60e-17!63;UBERON:0004121!5.70e-17!102;UBERON:0000924!5.70e-17!102;UBERON:0006601!5.70e-17!102;UBERON:0003080!8.35e-17!40;UBERON:0002780!3.01e-16!39;UBERON:0001890!3.01e-16!39;UBERON:0006240!3.01e-16!39;UBERON:0002020!1.11e-15!34;UBERON:0002791!2.52e-13!29;UBERON:0003528!2.52e-13!29;UBERON:0001893!2.52e-13!29;UBERON:0003056!3.08e-13!49;UBERON:0000956!2.30e-09!21;UBERON:0001869!2.30e-09!21;UBERON:0000203!2.30e-09!21;UBERON:0002619!2.53e-09!17;UBERON:0007811!2.78e-09!86;UBERON:0000153!9.35e-09!94;UBERON:0002021!2.41e-07!10;UBERON:0000411!2.41e-07!10;UBERON:0001950!2.41e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.13e-26,54;UBERON:0001017,4.58e-26,73;UBERON:0001016,1.46e-25,75;UBERON:0001049,4.50e-25,52;UBERON:0005068,4.50e-25,52;UBERON:0006241,4.50e-25,52;UBERON:0007135,4.50e-25,52;UBERON:0002616,1.43e-21,46;UBERON:0000955,1.77e-21,47;UBERON:0006238,1.77e-21,47;UBERON:0002346,2.80e-20,64;UBERON:0003075,2.80e-20,64;UBERON:0007284,2.80e-20,64;UBERON:0003080,3.07e-18,40;UBERON:0002780,1.31e-17,39;UBERON:0001890,1.31e-17,39;UBERON:0006240,1.31e-17,39;UBERON:0002020,6.17e-17,34;UBERON:0004121,6.38e-17,95;UBERON:0000924,6.38e-17,95;UBERON:0006601,6.38e-17,95;UBERON:0010371,1.02e-16,73;UBERON:0010314,2.17e-16,92;UBERON:0003528,2.86e-14,29;UBERON:0002791,2.86e-14,29;UBERON:0001893,2.86e-14,29;UBERON:0003056,3.61e-14,49;UBERON:0002619,5.99e-10,17;UBERON:0000956,8.40e-10,21;UBERON:0001869,8.40e-10,21;UBERON:0000203,8.40e-10,21;UBERON:0002021,3.83e-08,10;UBERON:0000411,3.83e-08,10;UBERON:0001950,3.83e-08,10;UBERON:0003076,2.05e-07,12;UBERON:0003057,2.05e-07,12|phase1_expression=3.68342348341026,2.44282785347553,1.36499771816861,0.60492842261366,0,1.00727563147134,0.934450562382103,0,0,0.468129052643987,0.171217968225505,0.239316476986009,0.171200729931206,0.262261207256992,0,0.202475267389826,0.699561878128147,0.157731082679119,0.137114433605739,0,1.7008658030214,0.893618560807968,0.522399578277871,0.799962113967033,2.06468352960453,1.72269589234506,0.430761996159075,1.07735616342945,0.760093677825496,0.252030129759931,1.10865255327652,1.90509202037889,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0,0.7813353445238,0,0.588231488031014,0,0.485510353031154,0.629484089877886,0,0.183546752161682,3.12956537739216,4.57852828398938,2.63623419281366,4.27745777963423,3.63964696225943,0,0,0,0.672187598284928,2.05807548828758,1.14613375975503,1.03134418455488,3.23706337375356,4.23192783417626,5.07065122804943,0.677689064138264,3.55717918444456,0.899899717281399,0.988866362566974,0,0.898800331555214,0.384218305321555,0.725827286159344,1.89008313664367,1.68259969081106,3.14216082844184,1.98781686856452,0.857435594504678,2.1086003624012,2.75765635983006,5.50579404996943,5.61824287574826,3.22573719838111,5.80299666012853,6.86157327018072,7.29278718779464,3.90856198601933,2.25105044012672,3.20876320331301,4.41942878210502,3.55929201997757,3.91438836233131,0.832988126665025,1.73814588245607,0.579728977403356,0,0,0.539703191637817,0,0,0.140444420131752,1.1930122580464,1.55871602761721,0.70667914902068,2.67602497575693,1.28326477414318,0,0,0.216491041011214,0,3.53867111510348,0.45673551887624,0,1.33597925158342,1.56136794089522,1.21786191324856,1.38369298353635,1.65794904607885,2.58695155698551,1.50799909595611,0.741584903203122,0.433798070759735,0.884610551949874,1.94120219936891,0.220841518460394,0.969750506270444,0,4.09893115816166,2.93225389538837,0.510914110417183,0.599075622529601,0.599902730993408,0.381210681219194,3.89455662452539,1.83000241127451,3.5183218591602,3.30266208365325,4.34716277461562,3.32460871295296,3.40706652442291,2.44414473240759,0.746441823660558,1.0108910337347,0.210441855886474,0.52048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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:107029 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99KE1,uniprot:Q3V2Y4 | |||
|association_with_transcript=-363bp_to_ENSMUST00000025439,NM_145494,uc008fox.1,uc008foy.1,uc012beu.1_5end | |||
|cluster_id=chr18:73975409..73975448,- | |||
|description=CAGE_peak_2_at_Me2_5end | |||
|id=chr18:73975409..73975448,- | |||
|ontology_enrichment_celltype=CL:0000117!7.52e-10!23;CL:0000337!7.52e-10!23;CL:0000221!1.92e-09!44;CL:0000133!1.92e-09!44;CL:0002319!4.41e-09!43;CL:0000540!1.17e-08!33;CL:0000047!1.17e-08!33;CL:0000031!1.17e-08!33;CL:0000404!1.17e-08!33;CL:0000055!7.17e-07!50;CL:0000393!7.62e-07!39;CL:0000211!7.62e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.31e-10,23;CL:0000337,2.31e-10,23;CL:0000221,6.12e-10,44;CL:0000133,6.12e-10,44;CL:0002319,1.55e-09,43;CL:0000540,3.22e-09,33;CL:0000047,3.22e-09,33;CL:0000031,3.22e-09,33;CL:0000404,3.22e-09,33;CL:0000393,1.35e-07,39;CL:0000211,1.35e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.80e-23!73;UBERON:0005743!1.80e-23!73;UBERON:0000073!2.40e-23!75;UBERON:0001016!2.40e-23!75;UBERON:0001049!7.71e-23!52;UBERON:0005068!7.71e-23!52;UBERON:0006241!7.71e-23!52;UBERON:0007135!7.71e-23!52;UBERON:0002616!1.18e-21!49;UBERON:0000955!1.46e-21!50;UBERON:0006238!1.46e-21!50;UBERON:0002346!3.37e-19!71;UBERON:0003075!3.37e-19!71;UBERON:0007284!3.37e-19!71;UBERON:0000033!1.60e-17!63;UBERON:0004121!5.70e-17!102;UBERON:0000924!5.70e-17!102;UBERON:0006601!5.70e-17!102;UBERON:0003080!8.35e-17!40;UBERON:0002780!3.01e-16!39;UBERON:0001890!3.01e-16!39;UBERON:0006240!3.01e-16!39;UBERON:0002020!1.11e-15!34;UBERON:0002791!2.52e-13!29;UBERON:0003528!2.52e-13!29;UBERON:0001893!2.52e-13!29;UBERON:0003056!3.08e-13!49;UBERON:0000956!2.30e-09!21;UBERON:0001869!2.30e-09!21;UBERON:0000203!2.30e-09!21;UBERON:0002619!2.53e-09!17;UBERON:0007811!2.78e-09!86;UBERON:0000153!9.35e-09!94;UBERON:0002021!2.41e-07!10;UBERON:0000411!2.41e-07!10;UBERON:0001950!2.41e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.13e-26,54;UBERON:0001017,4.58e-26,73;UBERON:0001016,1.46e-25,75;UBERON:0001049,4.50e-25,52;UBERON:0005068,4.50e-25,52;UBERON:0006241,4.50e-25,52;UBERON:0007135,4.50e-25,52;UBERON:0002616,1.43e-21,46;UBERON:0000955,1.77e-21,47;UBERON:0006238,1.77e-21,47;UBERON:0002346,2.80e-20,64;UBERON:0003075,2.80e-20,64;UBERON:0007284,2.80e-20,64;UBERON:0003080,3.07e-18,40;UBERON:0002780,1.31e-17,39;UBERON:0001890,1.31e-17,39;UBERON:0006240,1.31e-17,39;UBERON:0002020,6.17e-17,34;UBERON:0004121,6.38e-17,95;UBERON:0000924,6.38e-17,95;UBERON:0006601,6.38e-17,95;UBERON:0010371,1.02e-16,73;UBERON:0010314,2.17e-16,92;UBERON:0003528,2.86e-14,29;UBERON:0002791,2.86e-14,29;UBERON:0001893,2.86e-14,29;UBERON:0003056,3.61e-14,49;UBERON:0002619,5.99e-10,17;UBERON:0000956,8.40e-10,21;UBERON:0001869,8.40e-10,21;UBERON:0000203,8.40e-10,21;UBERON:0002021,3.83e-08,10;UBERON:0000411,3.83e-08,10;UBERON:0001950,3.83e-08,10;UBERON:0003076,2.05e-07,12;UBERON:0003057,2.05e-07,12 | |||
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| |||
|short_description=p2@Me2 | |||
}} |
Revision as of 02:49, 6 August 2015
Short description: | p2@Me2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Me2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -363bp_to_ENSMUST00000025439, NM_145494, uc008fox.1, uc008foy.1, uc012beu.1_5end |
EntrezGene: | 107029 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.31e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.31e-10 | 23 |
ectodermal cell | 6.12e-10 | 44 |
neurectodermal cell | 6.12e-10 | 44 |
neural cell | 1.55e-09 | 43 |
neuron | 3.22e-09 | 33 |
neuronal stem cell | 3.22e-09 | 33 |
neuroblast | 3.22e-09 | 33 |
electrically signaling cell | 3.22e-09 | 33 |
electrically responsive cell | 1.35e-07 | 39 |
electrically active cell | 1.35e-07 | 39 |