FFCP PHASE1:Mm9::chr19:55969096..55969105,+: Difference between revisions
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{{FFCP|EntrezGene=21416|HGNC=|MCL_coexpression_id=141|UniProt=D3Z002|association_with_transcript=72bp_to_ENSMUST00000142291_5end|description=CAGE_peak_52_at_Tcf7l2_5end|id=chr19:55969096..55969105,+|ontology_enrichment_celltype=CL:0000117!5.90e-15!23;CL:0000337!5.90e-15!23;CL:0002613!1.15e-12!3;CL:0000120!3.50e-12!3;CL:0002610!5.80e-12!3;CL:0000540!6.91e-10!33;CL:0000047!6.91e-10!33;CL:0000031!6.91e-10!33;CL:0000404!6.91e-10!33;CL:0000393!4.28e-08!39;CL:0000211!4.28e-08!39;CL:0002319!3.53e-07!43;CL:0000221!5.63e-07!44;CL:0000133!5.63e-07!44|ontology_enrichment_celltype_v019_2=CL:0002613,1.16e-30,3;CL:0000120,2.19e-29,3;CL:0000117,6.69e-27,23;CL:0000337,6.69e-27,23;CL:0000540,1.01e-18,33;CL:0000047,1.01e-18,33;CL:0000031,1.01e-18,33;CL:0000404,1.01e-18,33;CL:0000393,8.08e-16,39;CL:0000211,8.08e-16,39;CL:0002319,2.49e-14,43;CL:0000221,5.33e-14,44;CL:0000133,5.33e-14,44;CL:0002610,8.96e-14,3;CL:0002321,1.07e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000369!1.06e-12!5;UBERON:0002435!1.06e-12!5;UBERON:0000204!1.06e-12!5;UBERON:0010082!1.06e-12!5;UBERON:0004684!5.80e-12!3;UBERON:0002275!5.80e-12!3;UBERON:0002420!1.12e-11!8;UBERON:0007245!1.12e-11!8;UBERON:0010009!1.12e-11!8;UBERON:0010011!1.12e-11!8;UBERON:0000454!1.12e-11!8;UBERON:0001017!1.91e-07!73;UBERON:0005743!1.91e-07!73;UBERON:0002616!2.79e-07!49;UBERON:0000073!3.55e-07!75;UBERON:0001016!3.55e-07!75;UBERON:0000955!4.27e-07!50;UBERON:0006238!4.27e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.02e-18,5;UBERON:0002435,1.02e-18,5;UBERON:0000204,1.02e-18,5;UBERON:0010082,1.02e-18,5;UBERON:0004684,8.96e-14,3;UBERON:0002275,8.96e-14,3;UBERON:0002420,5.86e-12,8;UBERON:0007245,5.86e-12,8;UBERON:0010009,5.86e-12,8;UBERON:0010011,5.86e-12,8;UBERON:0000454,5.86e-12,8;UBERON:0001017,1.45e-10,73;UBERON:0001016,2.82e-10,75;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,1.40456071893706,0.614426133024974,3.03338461779446,4.02545631850602,3.64639359389732,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748953197024114,0.457500602818626,0,0,0,1.24672826735736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0.628839487883947,0.551530525350042,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0|short_description=p52@Tcf7l2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:21416 | |||
|HGNC= | |||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z002 | |||
|association_with_transcript=72bp_to_ENSMUST00000142291_5end | |||
|cluster_id=chr19:55969096..55969105,+ | |||
|description=CAGE_peak_52_at_Tcf7l2_5end | |||
|id=chr19:55969096..55969105,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.90e-15!23;CL:0000337!5.90e-15!23;CL:0002613!1.15e-12!3;CL:0000120!3.50e-12!3;CL:0002610!5.80e-12!3;CL:0000540!6.91e-10!33;CL:0000047!6.91e-10!33;CL:0000031!6.91e-10!33;CL:0000404!6.91e-10!33;CL:0000393!4.28e-08!39;CL:0000211!4.28e-08!39;CL:0002319!3.53e-07!43;CL:0000221!5.63e-07!44;CL:0000133!5.63e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.16e-30,3;CL:0000120,2.19e-29,3;CL:0000117,6.69e-27,23;CL:0000337,6.69e-27,23;CL:0000540,1.01e-18,33;CL:0000047,1.01e-18,33;CL:0000031,1.01e-18,33;CL:0000404,1.01e-18,33;CL:0000393,8.08e-16,39;CL:0000211,8.08e-16,39;CL:0002319,2.49e-14,43;CL:0000221,5.33e-14,44;CL:0000133,5.33e-14,44;CL:0002610,8.96e-14,3;CL:0002321,1.07e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!1.06e-12!5;UBERON:0002435!1.06e-12!5;UBERON:0000204!1.06e-12!5;UBERON:0010082!1.06e-12!5;UBERON:0004684!5.80e-12!3;UBERON:0002275!5.80e-12!3;UBERON:0002420!1.12e-11!8;UBERON:0007245!1.12e-11!8;UBERON:0010009!1.12e-11!8;UBERON:0010011!1.12e-11!8;UBERON:0000454!1.12e-11!8;UBERON:0001017!1.91e-07!73;UBERON:0005743!1.91e-07!73;UBERON:0002616!2.79e-07!49;UBERON:0000073!3.55e-07!75;UBERON:0001016!3.55e-07!75;UBERON:0000955!4.27e-07!50;UBERON:0006238!4.27e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.02e-18,5;UBERON:0002435,1.02e-18,5;UBERON:0000204,1.02e-18,5;UBERON:0010082,1.02e-18,5;UBERON:0004684,8.96e-14,3;UBERON:0002275,8.96e-14,3;UBERON:0002420,5.86e-12,8;UBERON:0007245,5.86e-12,8;UBERON:0010009,5.86e-12,8;UBERON:0010011,5.86e-12,8;UBERON:0000454,5.86e-12,8;UBERON:0001017,1.45e-10,73;UBERON:0001016,2.82e-10,75;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,1.40456071893706,0.614426133024974,3.03338461779446,4.02545631850602,3.64639359389732,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748953197024114,0.457500602818626,0,0,0,1.24672826735736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0.628839487883947,0.551530525350042,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0 | |||
|short_description=p52@Tcf7l2 | |||
}} |
Revision as of 08:55, 4 August 2015
Short description: | p52@Tcf7l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_52_at_Tcf7l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | 72bp_to_ENSMUST00000142291_5end |
EntrezGene: | 21416 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.16e-30 | 3 |
granule cell | 2.19e-29 | 3 |
CNS neuron (sensu Vertebrata) | 6.69e-27 | 23 |
neuroblast (sensu Vertebrata) | 6.69e-27 | 23 |
neuron | 1.01e-18 | 33 |
neuronal stem cell | 1.01e-18 | 33 |
neuroblast | 1.01e-18 | 33 |
electrically signaling cell | 1.01e-18 | 33 |
electrically responsive cell | 8.08e-16 | 39 |
electrically active cell | 8.08e-16 | 39 |
neural cell | 2.49e-14 | 43 |
ectodermal cell | 5.33e-14 | 44 |
neurectodermal cell | 5.33e-14 | 44 |
raphe nuclei neuron | 8.96e-14 | 3 |
embryonic cell | 1.07e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.02e-18 | 5 |
striatum | 1.02e-18 | 5 |
ventral part of telencephalon | 1.02e-18 | 5 |
future corpus striatum | 1.02e-18 | 5 |
raphe nuclei | 8.96e-14 | 3 |
reticular formation | 8.96e-14 | 3 |
basal ganglion | 5.86e-12 | 8 |
nuclear complex of neuraxis | 5.86e-12 | 8 |
aggregate regional part of brain | 5.86e-12 | 8 |
collection of basal ganglia | 5.86e-12 | 8 |
cerebral subcortex | 5.86e-12 | 8 |
central nervous system | 1.45e-10 | 73 |
nervous system | 2.82e-10 | 75 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |