FFCP PHASE1:Mm9::chr1:106665173..106665185,+: Difference between revisions
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{{FFCP|EntrezGene=23836|HGNC=|MCL_coexpression_id=1736|UniProt=Q9Z0M3|association_with_transcript=67bp_to_ENSMUST00000062528_5end|description=CAGE_peak_3_at_Cdh20_5end|id=chr1:106665173..106665185,+|ontology_enrichment_celltype=CL:0000540!2.10e-11!33;CL:0000047!2.10e-11!33;CL:0000031!2.10e-11!33;CL:0000404!2.10e-11!33;CL:0000221!1.89e-10!44;CL:0000133!1.89e-10!44;CL:0002319!5.59e-10!43;CL:0000117!5.81e-09!23;CL:0000337!5.81e-09!23;CL:0000393!1.86e-08!39;CL:0000211!1.86e-08!39;CL:0000055!2.08e-07!50|ontology_enrichment_celltype_v019_2=CL:0002610,3.54e-11,3;CL:0000117,1.37e-10,23;CL:0000337,1.37e-10,23;CL:0000540,2.33e-10,33;CL:0000047,2.33e-10,33;CL:0000031,2.33e-10,33;CL:0000404,2.33e-10,33;CL:0000393,1.80e-08,39;CL:0000211,1.80e-08,39;CL:0002319,1.66e-07,43;CL:0000221,2.72e-07,44;CL:0000133,2.72e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.87e-19!102;UBERON:0000924!3.87e-19!102;UBERON:0006601!3.87e-19!102;UBERON:0002346!1.97e-17!71;UBERON:0003075!1.97e-17!71;UBERON:0007284!1.97e-17!71;UBERON:0001017!2.68e-17!73;UBERON:0005743!2.68e-17!73;UBERON:0000073!3.24e-17!75;UBERON:0001016!3.24e-17!75;UBERON:0000033!1.55e-16!63;UBERON:0001049!1.18e-11!52;UBERON:0005068!1.18e-11!52;UBERON:0006241!1.18e-11!52;UBERON:0007135!1.18e-11!52;UBERON:0003056!1.21e-10!49;UBERON:0000020!3.56e-10!12;UBERON:0001032!3.56e-10!12;UBERON:0004456!3.56e-10!12;UBERON:0002616!7.52e-10!49;UBERON:0003076!9.19e-10!12;UBERON:0003057!9.19e-10!12;UBERON:0000955!1.82e-09!50;UBERON:0006238!1.82e-09!50;UBERON:0000970!4.14e-09!9;UBERON:0000019!4.14e-09!9;UBERON:0000047!4.14e-09!9;UBERON:0004088!4.14e-09!9;UBERON:0002104!4.14e-09!9;UBERON:0001456!4.14e-09!9;UBERON:0003072!4.14e-09!9;UBERON:0003071!4.14e-09!9;UBERON:0004128!4.14e-09!9;UBERON:0007811!1.49e-08!86;UBERON:0001444!2.42e-08!11;UBERON:0005085!9.88e-08!13;UBERON:0002020!1.16e-07!34;UBERON:0002298!1.90e-07!6;UBERON:0000153!2.72e-07!94;UBERON:0002420!5.74e-07!8;UBERON:0007245!5.74e-07!8;UBERON:0010009!5.74e-07!8;UBERON:0010011!5.74e-07!8;UBERON:0000454!5.74e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.73e-21,95;UBERON:0000924,9.73e-21,95;UBERON:0006601,9.73e-21,95;UBERON:0002346,2.19e-18,64;UBERON:0003075,2.19e-18,64;UBERON:0007284,2.19e-18,64;UBERON:0003076,1.55e-17,12;UBERON:0003057,1.55e-17,12;UBERON:0001017,5.40e-17,73;UBERON:0001016,1.95e-16,75;UBERON:0010371,1.19e-15,73;UBERON:0000073,2.25e-15,54;UBERON:0001049,3.28e-12,52;UBERON:0005068,3.28e-12,52;UBERON:0006241,3.28e-12,52;UBERON:0007135,3.28e-12,52;UBERON:0010314,1.27e-11,92;UBERON:0004684,3.54e-11,3;UBERON:0002275,3.54e-11,3;UBERON:0000970,5.28e-10,9;UBERON:0000019,5.28e-10,9;UBERON:0000047,5.28e-10,9;UBERON:0010312,5.28e-10,9;UBERON:0004088,5.28e-10,9;UBERON:0002104,5.28e-10,9;UBERON:0001456,5.28e-10,9;UBERON:0003072,5.28e-10,9;UBERON:0004128,5.28e-10,9;UBERON:0003071,5.28e-10,9;UBERON:0004733,8.59e-10,6;UBERON:0004732,8.59e-10,6;UBERON:0002028,8.59e-10,6;UBERON:0007277,8.59e-10,6;UBERON:0002240,2.95e-09,6;UBERON:0005174,2.95e-09,6;UBERON:0001137,2.95e-09,6;UBERON:0001896,1.07e-08,2;UBERON:0002298,1.07e-08,2;UBERON:0005290,1.07e-08,2;UBERON:0010096,1.07e-08,2;UBERON:0002950,1.20e-08,4;UBERON:0001891,1.20e-08,4;UBERON:0009616,1.20e-08,4;UBERON:0010286,1.20e-08,4;UBERON:0003056,3.20e-08,49;UBERON:0001444,3.95e-08,11;UBERON:0000020,2.00e-07,12;UBERON:0001032,2.00e-07,12;UBERON:0004456,2.00e-07,12;UBERON:0002616,2.66e-07,46;UBERON:0000955,4.19e-07,47;UBERON:0006238,4.19e-07,47;UBERON:0000033,7.87e-07,13;UBERON:0005085,7.87e-07,13|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0,0.135005938331691,0,0.856952953211411,1.10434270475807,0,0,0,2.20231761998777,2.93680877595932,2.15049146558741,0.263772575460388,0.0914876436024097,0.52091337055676,2.23346399201105,0.56276261003168,2.44477196442896,2.35702868378934,1.56608848879013,0.372798891650601,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,1.75668478206928,2.09446706813455,0,0,0,0,2.99581278809645,1.83000241127451,0.376963056338593,0.869121600961382,0.511430914660661,2.70124457927428,1.62241263067758,0,0,0,0.210441855886474,0.390361328888111,0.689706313300419,0.720248519221397,2.56198190320716,6.32739442107349,6.53379973452734,4.40398105430725,1.29351685369508,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.414251545071004,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0.465067889500816,0.268273401399619,0.350296027101508,0.16455984991348,0.164167464079095,0.243206428637567,0.292399974850665,0,0.268412837520744,2.10289948564127,0.411618449517138,0,0,0,0,0,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,6.74312477948726,5.04010252346474,0,0,0.631016438832513,0.390438744296638,0.215423397732799,0,0,0,1.21443210502468,1.16902343164525,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.859265911718438,0,0,0.675022500231806,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0.412070114477788,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.0936415074698824,0.0640251524048693,0.17230640686684,0.476293691283074,0.115884325944855,0.38581844092741,0,0,0,0.354951612318675,0.715308569841963,0.290692833264657,0.376437521661322,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0,0.29551344712669,0,0.309873682371932,0.385813221962283,0,0,0,0,0,0|short_description=p3@Cdh20}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:23836 | |||
|HGNC= | |||
|MCL_coexpression_id=1736 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9Z0M3 | |||
|association_with_transcript=67bp_to_ENSMUST00000062528_5end | |||
|cluster_id=chr1:106665173..106665185,+ | |||
|description=CAGE_peak_3_at_Cdh20_5end | |||
|id=chr1:106665173..106665185,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.10e-11!33;CL:0000047!2.10e-11!33;CL:0000031!2.10e-11!33;CL:0000404!2.10e-11!33;CL:0000221!1.89e-10!44;CL:0000133!1.89e-10!44;CL:0002319!5.59e-10!43;CL:0000117!5.81e-09!23;CL:0000337!5.81e-09!23;CL:0000393!1.86e-08!39;CL:0000211!1.86e-08!39;CL:0000055!2.08e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,3.54e-11,3;CL:0000117,1.37e-10,23;CL:0000337,1.37e-10,23;CL:0000540,2.33e-10,33;CL:0000047,2.33e-10,33;CL:0000031,2.33e-10,33;CL:0000404,2.33e-10,33;CL:0000393,1.80e-08,39;CL:0000211,1.80e-08,39;CL:0002319,1.66e-07,43;CL:0000221,2.72e-07,44;CL:0000133,2.72e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.87e-19!102;UBERON:0000924!3.87e-19!102;UBERON:0006601!3.87e-19!102;UBERON:0002346!1.97e-17!71;UBERON:0003075!1.97e-17!71;UBERON:0007284!1.97e-17!71;UBERON:0001017!2.68e-17!73;UBERON:0005743!2.68e-17!73;UBERON:0000073!3.24e-17!75;UBERON:0001016!3.24e-17!75;UBERON:0000033!1.55e-16!63;UBERON:0001049!1.18e-11!52;UBERON:0005068!1.18e-11!52;UBERON:0006241!1.18e-11!52;UBERON:0007135!1.18e-11!52;UBERON:0003056!1.21e-10!49;UBERON:0000020!3.56e-10!12;UBERON:0001032!3.56e-10!12;UBERON:0004456!3.56e-10!12;UBERON:0002616!7.52e-10!49;UBERON:0003076!9.19e-10!12;UBERON:0003057!9.19e-10!12;UBERON:0000955!1.82e-09!50;UBERON:0006238!1.82e-09!50;UBERON:0000970!4.14e-09!9;UBERON:0000019!4.14e-09!9;UBERON:0000047!4.14e-09!9;UBERON:0004088!4.14e-09!9;UBERON:0002104!4.14e-09!9;UBERON:0001456!4.14e-09!9;UBERON:0003072!4.14e-09!9;UBERON:0003071!4.14e-09!9;UBERON:0004128!4.14e-09!9;UBERON:0007811!1.49e-08!86;UBERON:0001444!2.42e-08!11;UBERON:0005085!9.88e-08!13;UBERON:0002020!1.16e-07!34;UBERON:0002298!1.90e-07!6;UBERON:0000153!2.72e-07!94;UBERON:0002420!5.74e-07!8;UBERON:0007245!5.74e-07!8;UBERON:0010009!5.74e-07!8;UBERON:0010011!5.74e-07!8;UBERON:0000454!5.74e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.73e-21,95;UBERON:0000924,9.73e-21,95;UBERON:0006601,9.73e-21,95;UBERON:0002346,2.19e-18,64;UBERON:0003075,2.19e-18,64;UBERON:0007284,2.19e-18,64;UBERON:0003076,1.55e-17,12;UBERON:0003057,1.55e-17,12;UBERON:0001017,5.40e-17,73;UBERON:0001016,1.95e-16,75;UBERON:0010371,1.19e-15,73;UBERON:0000073,2.25e-15,54;UBERON:0001049,3.28e-12,52;UBERON:0005068,3.28e-12,52;UBERON:0006241,3.28e-12,52;UBERON:0007135,3.28e-12,52;UBERON:0010314,1.27e-11,92;UBERON:0004684,3.54e-11,3;UBERON:0002275,3.54e-11,3;UBERON:0000970,5.28e-10,9;UBERON:0000019,5.28e-10,9;UBERON:0000047,5.28e-10,9;UBERON:0010312,5.28e-10,9;UBERON:0004088,5.28e-10,9;UBERON:0002104,5.28e-10,9;UBERON:0001456,5.28e-10,9;UBERON:0003072,5.28e-10,9;UBERON:0004128,5.28e-10,9;UBERON:0003071,5.28e-10,9;UBERON:0004733,8.59e-10,6;UBERON:0004732,8.59e-10,6;UBERON:0002028,8.59e-10,6;UBERON:0007277,8.59e-10,6;UBERON:0002240,2.95e-09,6;UBERON:0005174,2.95e-09,6;UBERON:0001137,2.95e-09,6;UBERON:0001896,1.07e-08,2;UBERON:0002298,1.07e-08,2;UBERON:0005290,1.07e-08,2;UBERON:0010096,1.07e-08,2;UBERON:0002950,1.20e-08,4;UBERON:0001891,1.20e-08,4;UBERON:0009616,1.20e-08,4;UBERON:0010286,1.20e-08,4;UBERON:0003056,3.20e-08,49;UBERON:0001444,3.95e-08,11;UBERON:0000020,2.00e-07,12;UBERON:0001032,2.00e-07,12;UBERON:0004456,2.00e-07,12;UBERON:0002616,2.66e-07,46;UBERON:0000955,4.19e-07,47;UBERON:0006238,4.19e-07,47;UBERON:0000033,7.87e-07,13;UBERON:0005085,7.87e-07,13 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0,0.135005938331691,0,0.856952953211411,1.10434270475807,0,0,0,2.20231761998777,2.93680877595932,2.15049146558741,0.263772575460388,0.0914876436024097,0.52091337055676,2.23346399201105,0.56276261003168,2.44477196442896,2.35702868378934,1.56608848879013,0.372798891650601,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,1.75668478206928,2.09446706813455,0,0,0,0,2.99581278809645,1.83000241127451,0.376963056338593,0.869121600961382,0.511430914660661,2.70124457927428,1.62241263067758,0,0,0,0.210441855886474,0.390361328888111,0.689706313300419,0.720248519221397,2.56198190320716,6.32739442107349,6.53379973452734,4.40398105430725,1.29351685369508,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.414251545071004,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0.465067889500816,0.268273401399619,0.350296027101508,0.16455984991348,0.164167464079095,0.243206428637567,0.292399974850665,0,0.268412837520744,2.10289948564127,0.411618449517138,0,0,0,0,0,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,6.74312477948726,5.04010252346474,0,0,0.631016438832513,0.390438744296638,0.215423397732799,0,0,0,1.21443210502468,1.16902343164525,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.859265911718438,0,0,0.675022500231806,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0.412070114477788,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.0936415074698824,0.0640251524048693,0.17230640686684,0.476293691283074,0.115884325944855,0.38581844092741,0,0,0,0.354951612318675,0.715308569841963,0.290692833264657,0.376437521661322,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0,0.29551344712669,0,0.309873682371932,0.385813221962283,0,0,0,0,0,0 | |||
|short_description=p3@Cdh20 | |||
}} |
Revision as of 14:51, 4 August 2015
Short description: | p3@Cdh20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cdh20_5end |
Coexpression cluster: | MCL_coexpression_mm9:1736 |
Association with transcript: | 67bp_to_ENSMUST00000062528_5end |
EntrezGene: | 23836 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 3.54e-11 | 3 |
CNS neuron (sensu Vertebrata) | 1.37e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.37e-10 | 23 |
neuron | 2.33e-10 | 33 |
neuronal stem cell | 2.33e-10 | 33 |
neuroblast | 2.33e-10 | 33 |
electrically signaling cell | 2.33e-10 | 33 |
electrically responsive cell | 1.80e-08 | 39 |
electrically active cell | 1.80e-08 | 39 |
neural cell | 1.66e-07 | 43 |
ectodermal cell | 2.72e-07 | 44 |
neurectodermal cell | 2.72e-07 | 44 |