FFCP PHASE1:Mm9::chr1:137270996..137271011,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=176|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:137270996..137271011,-|id=chr1:137270996..137271011,-|ontology_enrichment_celltype=CL:0000055!2.08e-15!50;CL:0002319!3.56e-13!43;CL:0000221!5.32e-13!44;CL:0000133!5.32e-13!44;CL:0000393!3.54e-10!39;CL:0000211!3.54e-10!39;CL:0002321!1.46e-08!70;CL:0000220!1.46e-08!70;CL:0000333!9.79e-08!10;CL:0000095!9.79e-08!10;CL:0000243!9.79e-08!10;CL:0000123!9.79e-08!10;CL:0000125!9.79e-08!10;CL:0000030!9.79e-08!10;CL:0000339!9.79e-08!10;CL:0000540!1.52e-07!33;CL:0000047!1.52e-07!33;CL:0000031!1.52e-07!33;CL:0000404!1.52e-07!33;CL:0002453!4.64e-07!8;CL:0000117!4.65e-07!23;CL:0000337!4.65e-07!23|ontology_enrichment_celltype_v019_2=CL:0002453,1.35e-14,8;CL:0002319,2.64e-14,43;CL:0000333,7.41e-14,10;CL:0000095,7.41e-14,10;CL:0000243,7.41e-14,10;CL:0000123,7.41e-14,10;CL:0000125,7.41e-14,10;CL:0000030,7.41e-14,10;CL:0000339,7.41e-14,10;CL:0000221,7.62e-14,44;CL:0000133,7.62e-14,44;CL:0002321,4.21e-12,70;CL:0000128,6.40e-11,6;CL:0000126,6.40e-11,6;CL:0000127,6.40e-11,6;CL:0000393,2.65e-08,39;CL:0000211,2.65e-08,39;CL:0000117,8.25e-07,23;CL:0000337,8.25e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.47e-22!75;UBERON:0001016!5.47e-22!75;UBERON:0001017!4.75e-21!73;UBERON:0005743!4.75e-21!73;UBERON:0004121!2.15e-18!102;UBERON:0000924!2.15e-18!102;UBERON:0006601!2.15e-18!102;UBERON:0001049!2.36e-15!52;UBERON:0005068!2.36e-15!52;UBERON:0006241!2.36e-15!52;UBERON:0007135!2.36e-15!52;UBERON:0000033!2.43e-14!63;UBERON:0000955!2.74e-14!50;UBERON:0006238!2.74e-14!50;UBERON:0002346!6.42e-14!71;UBERON:0003075!6.42e-14!71;UBERON:0007284!6.42e-14!71;UBERON:0002616!9.44e-14!49;UBERON:0002020!3.06e-12!34;UBERON:0002791!1.66e-09!29;UBERON:0003528!1.66e-09!29;UBERON:0001893!1.66e-09!29;UBERON:0003080!2.36e-09!40;UBERON:0002780!5.18e-09!39;UBERON:0001890!5.18e-09!39;UBERON:0006240!5.18e-09!39;UBERON:0003056!6.01e-09!49;UBERON:0000956!2.15e-08!21;UBERON:0001869!2.15e-08!21;UBERON:0000203!2.15e-08!21;UBERON:0002619!4.16e-08!17;UBERON:0002021!4.28e-08!10;UBERON:0000411!4.28e-08!10;UBERON:0001950!4.28e-08!10;UBERON:0003076!1.46e-07!12;UBERON:0003057!1.46e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.73e-25,75;UBERON:0001017,2.34e-24,73;UBERON:0000073,4.62e-20,54;UBERON:0004121,9.72e-19,95;UBERON:0000924,9.72e-19,95;UBERON:0006601,9.72e-19,95;UBERON:0002020,5.64e-18,34;UBERON:0001049,9.69e-18,52;UBERON:0005068,9.69e-18,52;UBERON:0006241,9.69e-18,52;UBERON:0007135,9.69e-18,52;UBERON:0002021,4.86e-17,10;UBERON:0000411,4.86e-17,10;UBERON:0001950,4.86e-17,10;UBERON:0003528,1.20e-13,29;UBERON:0002791,1.20e-13,29;UBERON:0001893,1.20e-13,29;UBERON:0000955,1.34e-13,47;UBERON:0006238,1.34e-13,47;UBERON:0002619,1.93e-13,17;UBERON:0002346,4.77e-13,64;UBERON:0003075,4.77e-13,64;UBERON:0007284,4.77e-13,64;UBERON:0002616,1.16e-12,46;UBERON:0000956,6.29e-12,21;UBERON:0001869,6.29e-12,21;UBERON:0000203,6.29e-12,21;UBERON:0010371,1.44e-10,73;UBERON:0003076,3.54e-10,12;UBERON:0003057,3.54e-10,12;UBERON:0002780,3.97e-10,39;UBERON:0001890,3.97e-10,39;UBERON:0006240,3.97e-10,39;UBERON:0003080,9.27e-10,40;UBERON:0010314,1.14e-07,92;UBERON:0002240,1.83e-07,6;UBERON:0005174,1.83e-07,6;UBERON:0001137,1.83e-07,6;UBERON:0004111,2.74e-07,122;UBERON:0003056,3.78e-07,49;UBERON:0000025,7.51e-07,114|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78407908307194,2.83855407414641,2.56965453026354,1.56478268869608,5.45062890951116,3.51497892375155,7.58276606389705,2.93971485413261,7.18762821824858,0,0,0,0.514518872071894,0.573066879877513,1.03134418455488,0.202316460859598,0.528990979272033,0,0.338844532069132,2.66788438833342,0,2.96659908770092,0,9.88680364710736,28.0479362884735,0.518448061542388,0.810035629990144,0,3.71346279724945,5.30084498283872,0.367472397644862,0.191690942036473,0,6.60695285996332,2.80912143787413,2.91852413186863,0.395658863190582,0.731901148819277,1.04182674111352,4.4669279840221,2.25105044012672,1.5279824777681,2.94628585473668,2.42031857358475,0.559198337475902,0.530083353332288,1.058001841495,0.289864488701678,0,0,0,0,0,1.12355536105401,2.89731548382698,1.81850203222008,3.88673531961374,0.14084341977668,0,0,0,0.432982082022428,1.01343946190039,1.01104889002957,0.34255163915718,0,0.148442139064825,0,0.913396434936424,0.230615497256059,0,0.352766121407114,0.125666591329675,0,0.433798070759735,0,0.808834249737046,0.441683036920787,0.969750506270444,0,0.585561594023094,0.41889341362691,0,0,0,0,0.599162557619291,0,0,1.04294592115366,0.767146371990992,1.0389402227978,0.324482526135515,0.101839363850316,0.124406970610093,0,0.420883711772948,0.260240885925407,0,0.360124259610698,0,0.0680364991513279,0.12811372028485,0.374806898238915,0.517406741478031,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0,0.154267112887378,0.465067889500816,0,0,0,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0.420579897128254,0.205809224758569,0,0,0.213288250535234,0.696710015581316,0.257734922644187,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0.758671603812327,0.114248512609729,0,0.407302655690628,0.387904974335251,0,0.0632365371242573,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0.476087281772027,0.195133647857799,0.157635144106191,0,0,0.491589944147214,0.172684981865896,0,0,0,0,0,1.12385412991454,1.40654023910644,0.491804836130026,2.27223834483936,0,0.390438744296638,0.430846795465598,0.716906393857656,1.11399337041197,0.283076530788832,0,0.292255857911312,1.18586333383957,1.92792789853084,0,0.35613120733451,0.162886959353576,0,0,0.485561272309963,0,0.188605079755898,0,0,0,0,0,0,1.05418608574999,0,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0.21183207086382,0,0.32977250588296,0,0.0603129249281559,0,0,0,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.216010681643603,0.418176592028937,0,0.269728692769641,0,0.26175594198403,0,1.24267862617385,0,0,0,0.194451188344048,0.387479470433193,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0.680191150845634,0,0,0,0.386379188064381,0.375364950902364,0,0.214368379079066,8.02515366456581,1.12950368523413,4.60325236507177,3.43737308063638,3.60891682921744,6.85082519770642,3.7769694869485,2.70009000092722,6.30449684513909,6.79713613476307,5.1776031175182,0.518936737920883,0,0,0,0.209613162627982,0,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0.377252682772152,0.187283014939765,0.256100609619477,0.287177344778066,0,0,0.192909220463705,0.412085900803307,0.588795680537589,0,0.354951612318675,0,0.436039249896986,0.188218760830661,0.169229215783353,0.365855945745545,0.263069711437843,0.407412341537585,0,0.474540072496697,0.197008964751127,0,0.309873682371932,0.192906610981141,0.749431733813838,0.467863216890817,0.429742108096597,0.765153328275374,0.882365676478062,3.01428186306548|short_description=p@chr1:137270996..137271011,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=176 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:137270996..137271011,- | |||
|description=CAGE_peak_at_chr1:137270996..137271011,- | |||
|id=chr1:137270996..137271011,- | |||
|ontology_enrichment_celltype=CL:0000055!2.08e-15!50;CL:0002319!3.56e-13!43;CL:0000221!5.32e-13!44;CL:0000133!5.32e-13!44;CL:0000393!3.54e-10!39;CL:0000211!3.54e-10!39;CL:0002321!1.46e-08!70;CL:0000220!1.46e-08!70;CL:0000333!9.79e-08!10;CL:0000095!9.79e-08!10;CL:0000243!9.79e-08!10;CL:0000123!9.79e-08!10;CL:0000125!9.79e-08!10;CL:0000030!9.79e-08!10;CL:0000339!9.79e-08!10;CL:0000540!1.52e-07!33;CL:0000047!1.52e-07!33;CL:0000031!1.52e-07!33;CL:0000404!1.52e-07!33;CL:0002453!4.64e-07!8;CL:0000117!4.65e-07!23;CL:0000337!4.65e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.35e-14,8;CL:0002319,2.64e-14,43;CL:0000333,7.41e-14,10;CL:0000095,7.41e-14,10;CL:0000243,7.41e-14,10;CL:0000123,7.41e-14,10;CL:0000125,7.41e-14,10;CL:0000030,7.41e-14,10;CL:0000339,7.41e-14,10;CL:0000221,7.62e-14,44;CL:0000133,7.62e-14,44;CL:0002321,4.21e-12,70;CL:0000128,6.40e-11,6;CL:0000126,6.40e-11,6;CL:0000127,6.40e-11,6;CL:0000393,2.65e-08,39;CL:0000211,2.65e-08,39;CL:0000117,8.25e-07,23;CL:0000337,8.25e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.47e-22!75;UBERON:0001016!5.47e-22!75;UBERON:0001017!4.75e-21!73;UBERON:0005743!4.75e-21!73;UBERON:0004121!2.15e-18!102;UBERON:0000924!2.15e-18!102;UBERON:0006601!2.15e-18!102;UBERON:0001049!2.36e-15!52;UBERON:0005068!2.36e-15!52;UBERON:0006241!2.36e-15!52;UBERON:0007135!2.36e-15!52;UBERON:0000033!2.43e-14!63;UBERON:0000955!2.74e-14!50;UBERON:0006238!2.74e-14!50;UBERON:0002346!6.42e-14!71;UBERON:0003075!6.42e-14!71;UBERON:0007284!6.42e-14!71;UBERON:0002616!9.44e-14!49;UBERON:0002020!3.06e-12!34;UBERON:0002791!1.66e-09!29;UBERON:0003528!1.66e-09!29;UBERON:0001893!1.66e-09!29;UBERON:0003080!2.36e-09!40;UBERON:0002780!5.18e-09!39;UBERON:0001890!5.18e-09!39;UBERON:0006240!5.18e-09!39;UBERON:0003056!6.01e-09!49;UBERON:0000956!2.15e-08!21;UBERON:0001869!2.15e-08!21;UBERON:0000203!2.15e-08!21;UBERON:0002619!4.16e-08!17;UBERON:0002021!4.28e-08!10;UBERON:0000411!4.28e-08!10;UBERON:0001950!4.28e-08!10;UBERON:0003076!1.46e-07!12;UBERON:0003057!1.46e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.73e-25,75;UBERON:0001017,2.34e-24,73;UBERON:0000073,4.62e-20,54;UBERON:0004121,9.72e-19,95;UBERON:0000924,9.72e-19,95;UBERON:0006601,9.72e-19,95;UBERON:0002020,5.64e-18,34;UBERON:0001049,9.69e-18,52;UBERON:0005068,9.69e-18,52;UBERON:0006241,9.69e-18,52;UBERON:0007135,9.69e-18,52;UBERON:0002021,4.86e-17,10;UBERON:0000411,4.86e-17,10;UBERON:0001950,4.86e-17,10;UBERON:0003528,1.20e-13,29;UBERON:0002791,1.20e-13,29;UBERON:0001893,1.20e-13,29;UBERON:0000955,1.34e-13,47;UBERON:0006238,1.34e-13,47;UBERON:0002619,1.93e-13,17;UBERON:0002346,4.77e-13,64;UBERON:0003075,4.77e-13,64;UBERON:0007284,4.77e-13,64;UBERON:0002616,1.16e-12,46;UBERON:0000956,6.29e-12,21;UBERON:0001869,6.29e-12,21;UBERON:0000203,6.29e-12,21;UBERON:0010371,1.44e-10,73;UBERON:0003076,3.54e-10,12;UBERON:0003057,3.54e-10,12;UBERON:0002780,3.97e-10,39;UBERON:0001890,3.97e-10,39;UBERON:0006240,3.97e-10,39;UBERON:0003080,9.27e-10,40;UBERON:0010314,1.14e-07,92;UBERON:0002240,1.83e-07,6;UBERON:0005174,1.83e-07,6;UBERON:0001137,1.83e-07,6;UBERON:0004111,2.74e-07,122;UBERON:0003056,3.78e-07,49;UBERON:0000025,7.51e-07,114 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78407908307194,2.83855407414641,2.56965453026354,1.56478268869608,5.45062890951116,3.51497892375155,7.58276606389705,2.93971485413261,7.18762821824858,0,0,0,0.514518872071894,0.573066879877513,1.03134418455488,0.202316460859598,0.528990979272033,0,0.338844532069132,2.66788438833342,0,2.96659908770092,0,9.88680364710736,28.0479362884735,0.518448061542388,0.810035629990144,0,3.71346279724945,5.30084498283872,0.367472397644862,0.191690942036473,0,6.60695285996332,2.80912143787413,2.91852413186863,0.395658863190582,0.731901148819277,1.04182674111352,4.4669279840221,2.25105044012672,1.5279824777681,2.94628585473668,2.42031857358475,0.559198337475902,0.530083353332288,1.058001841495,0.289864488701678,0,0,0,0,0,1.12355536105401,2.89731548382698,1.81850203222008,3.88673531961374,0.14084341977668,0,0,0,0.432982082022428,1.01343946190039,1.01104889002957,0.34255163915718,0,0.148442139064825,0,0.913396434936424,0.230615497256059,0,0.352766121407114,0.125666591329675,0,0.433798070759735,0,0.808834249737046,0.441683036920787,0.969750506270444,0,0.585561594023094,0.41889341362691,0,0,0,0,0.599162557619291,0,0,1.04294592115366,0.767146371990992,1.0389402227978,0.324482526135515,0.101839363850316,0.124406970610093,0,0.420883711772948,0.260240885925407,0,0.360124259610698,0,0.0680364991513279,0.12811372028485,0.374806898238915,0.517406741478031,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0,0.154267112887378,0.465067889500816,0,0,0,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0.420579897128254,0.205809224758569,0,0,0.213288250535234,0.696710015581316,0.257734922644187,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0.758671603812327,0.114248512609729,0,0.407302655690628,0.387904974335251,0,0.0632365371242573,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0.476087281772027,0.195133647857799,0.157635144106191,0,0,0.491589944147214,0.172684981865896,0,0,0,0,0,1.12385412991454,1.40654023910644,0.491804836130026,2.27223834483936,0,0.390438744296638,0.430846795465598,0.716906393857656,1.11399337041197,0.283076530788832,0,0.292255857911312,1.18586333383957,1.92792789853084,0,0.35613120733451,0.162886959353576,0,0,0.485561272309963,0,0.188605079755898,0,0,0,0,0,0,1.05418608574999,0,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0.21183207086382,0,0.32977250588296,0,0.0603129249281559,0,0,0,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.216010681643603,0.418176592028937,0,0.269728692769641,0,0.26175594198403,0,1.24267862617385,0,0,0,0.194451188344048,0.387479470433193,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0.680191150845634,0,0,0,0.386379188064381,0.375364950902364,0,0.214368379079066,8.02515366456581,1.12950368523413,4.60325236507177,3.43737308063638,3.60891682921744,6.85082519770642,3.7769694869485,2.70009000092722,6.30449684513909,6.79713613476307,5.1776031175182,0.518936737920883,0,0,0,0.209613162627982,0,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0.377252682772152,0.187283014939765,0.256100609619477,0.287177344778066,0,0,0.192909220463705,0.412085900803307,0.588795680537589,0,0.354951612318675,0,0.436039249896986,0.188218760830661,0.169229215783353,0.365855945745545,0.263069711437843,0.407412341537585,0,0.474540072496697,0.197008964751127,0,0.309873682371932,0.192906610981141,0.749431733813838,0.467863216890817,0.429742108096597,0.765153328275374,0.882365676478062,3.01428186306548 | |||
|short_description=p@chr1:137270996..137271011,- | |||
}} |
Latest revision as of 20:50, 4 August 2015
Short description: | p@chr1:137270996..137271011, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:137270996..137271011, - |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.35e-14 | 8 |
neural cell | 2.64e-14 | 43 |
migratory neural crest cell | 7.41e-14 | 10 |
neuron associated cell | 7.41e-14 | 10 |
glial cell (sensu Vertebrata) | 7.41e-14 | 10 |
neuron associated cell (sensu Vertebrata) | 7.41e-14 | 10 |
glial cell | 7.41e-14 | 10 |
glioblast | 7.41e-14 | 10 |
glioblast (sensu Vertebrata) | 7.41e-14 | 10 |
ectodermal cell | 7.62e-14 | 44 |
neurectodermal cell | 7.62e-14 | 44 |
embryonic cell | 4.21e-12 | 70 |
oligodendrocyte | 6.40e-11 | 6 |
macroglial cell | 6.40e-11 | 6 |
astrocyte | 6.40e-11 | 6 |
electrically responsive cell | 2.65e-08 | 39 |
electrically active cell | 2.65e-08 | 39 |
CNS neuron (sensu Vertebrata) | 8.25e-07 | 23 |
neuroblast (sensu Vertebrata) | 8.25e-07 | 23 |