FFCP PHASE1:Mm9::chr1:165243978..165243992,-: Difference between revisions
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{{FFCP|EntrezGene=18933|HGNC=|MCL_coexpression_id=230|UniProt=P63013|association_with_transcript=-137bp_to_ENSMUST00000027878_5end|description=CAGE_peak_9_at_Prrx1_5end|id=chr1:165243978..165243992,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,1.16e-30,3;CL:0000359,1.16e-30,3;CL:0002539,1.16e-30,3;CL:0000514,1.16e-30,3;CL:0000680,1.02e-15,6;CL:0000187,1.02e-15,6;CL:0000056,1.02e-15,6;CL:0000222,1.43e-13,7;CL:0000355,1.06e-10,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000947,6.21e-40,4;UBERON:0001637,6.21e-40,4;UBERON:0004573,6.21e-40,4;UBERON:0003509,6.21e-40,4;UBERON:0004571,6.21e-40,4;UBERON:0010191,6.21e-40,4;UBERON:0004572,6.21e-40,4;UBERON:0000055,4.52e-32,5;UBERON:0007500,4.52e-32,5;UBERON:0001981,4.52e-32,5;UBERON:0002049,4.52e-32,5;UBERON:0007798,4.52e-32,5;UBERON:0004537,4.52e-32,5;UBERON:0006965,4.52e-32,5;UBERON:0001135,1.16e-30,3;UBERON:0004237,1.16e-30,3;UBERON:0004695,1.16e-30,3;UBERON:0002111,1.16e-30,3;UBERON:0004178,1.16e-30,3;UBERON:0001134,1.06e-10,9;UBERON:0002036,1.06e-10,9;UBERON:0002385,1.06e-10,9;UBERON:0000486,1.06e-10,9;UBERON:0007503,1.06e-10,9;UBERON:0001015,1.06e-10,9;UBERON:0002329,1.06e-10,9;UBERON:0003082,1.06e-10,9;UBERON:0003059,1.06e-10,9;UBERON:0007282,1.06e-10,9;UBERON:0004290,1.06e-10,9;UBERON:0009618,1.06e-10,9;UBERON:0000383,1.08e-09,10;UBERON:0007524,7.27e-09,11;UBERON:0003077,7.27e-09,11;UBERON:0007285,7.27e-09,11;UBERON:0004535,2.76e-07,23;UBERON:0001009,2.76e-07,23|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,2.83855407414641,6.05704282133549,0,0.218025156380447,0,0,0.55994568650145,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0.677689064138264,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,1.36344258062446,0.779358013808606,0,0,1.28326477414318,0,0,0,0,0,0,0.776813650941515,0.29688427812965,0.346970653532272,0.304465478312141,0,0,0.117588707135705,0.251333182659351,0,1.3013942122792,0,0,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0,0,0,0,0.459804208866946,0.360124259610698,0.452114453507145,0.136072998302656,0.2562274405697,0.0937017245597288,0,0,0.378212160335639,0.527853372491847,0.657587197282725,0,0.696504333044333,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0.439100230582101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387904974335251,0,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.704070744865506,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983609672260053,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.989820737835213,0,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0,0,2.10837217149998,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0,0.23467170806371,0,0.220528398054962,1.15420377059036,0.161464426695906,0.361877549568935,0,0.164140899745061,0,0.18542530201051,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.205421914329655,0.129920822977795,0.358053391334963,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0.563047426353546,1.09890974560359,0.643105137237198,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0.962757628775446,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.17230640686684,0,0,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,0,0.231867835620421|short_description=p9@Prrx1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18933 | |||
|HGNC= | |||
|MCL_coexpression_id=230 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P63013 | |||
|association_with_transcript=-137bp_to_ENSMUST00000027878_5end | |||
|cluster_id=chr1:165243978..165243992,- | |||
|description=CAGE_peak_9_at_Prrx1_5end | |||
|id=chr1:165243978..165243992,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.16e-30,3;CL:0000359,1.16e-30,3;CL:0002539,1.16e-30,3;CL:0000514,1.16e-30,3;CL:0000680,1.02e-15,6;CL:0000187,1.02e-15,6;CL:0000056,1.02e-15,6;CL:0000222,1.43e-13,7;CL:0000355,1.06e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,6.21e-40,4;UBERON:0001637,6.21e-40,4;UBERON:0004573,6.21e-40,4;UBERON:0003509,6.21e-40,4;UBERON:0004571,6.21e-40,4;UBERON:0010191,6.21e-40,4;UBERON:0004572,6.21e-40,4;UBERON:0000055,4.52e-32,5;UBERON:0007500,4.52e-32,5;UBERON:0001981,4.52e-32,5;UBERON:0002049,4.52e-32,5;UBERON:0007798,4.52e-32,5;UBERON:0004537,4.52e-32,5;UBERON:0006965,4.52e-32,5;UBERON:0001135,1.16e-30,3;UBERON:0004237,1.16e-30,3;UBERON:0004695,1.16e-30,3;UBERON:0002111,1.16e-30,3;UBERON:0004178,1.16e-30,3;UBERON:0001134,1.06e-10,9;UBERON:0002036,1.06e-10,9;UBERON:0002385,1.06e-10,9;UBERON:0000486,1.06e-10,9;UBERON:0007503,1.06e-10,9;UBERON:0001015,1.06e-10,9;UBERON:0002329,1.06e-10,9;UBERON:0003082,1.06e-10,9;UBERON:0003059,1.06e-10,9;UBERON:0007282,1.06e-10,9;UBERON:0004290,1.06e-10,9;UBERON:0009618,1.06e-10,9;UBERON:0000383,1.08e-09,10;UBERON:0007524,7.27e-09,11;UBERON:0003077,7.27e-09,11;UBERON:0007285,7.27e-09,11;UBERON:0004535,2.76e-07,23;UBERON:0001009,2.76e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,2.83855407414641,6.05704282133549,0,0.218025156380447,0,0,0.55994568650145,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0.677689064138264,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,1.36344258062446,0.779358013808606,0,0,1.28326477414318,0,0,0,0,0,0,0.776813650941515,0.29688427812965,0.346970653532272,0.304465478312141,0,0,0.117588707135705,0.251333182659351,0,1.3013942122792,0,0,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0,0,0,0,0.459804208866946,0.360124259610698,0.452114453507145,0.136072998302656,0.2562274405697,0.0937017245597288,0,0,0.378212160335639,0.527853372491847,0.657587197282725,0,0.696504333044333,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0.439100230582101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387904974335251,0,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.704070744865506,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983609672260053,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.989820737835213,0,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0,0,2.10837217149998,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0,0.23467170806371,0,0.220528398054962,1.15420377059036,0.161464426695906,0.361877549568935,0,0.164140899745061,0,0.18542530201051,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.205421914329655,0.129920822977795,0.358053391334963,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0.563047426353546,1.09890974560359,0.643105137237198,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0.962757628775446,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.17230640686684,0,0,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,0,0.231867835620421 | |||
|short_description=p9@Prrx1 | |||
}} |
Revision as of 03:31, 5 August 2015
Short description: | p9@Prrx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Prrx1_5end |
Coexpression cluster: | MCL_coexpression_mm9:230 |
Association with transcript: | -137bp_to_ENSMUST00000027878_5end |
EntrezGene: | 18933 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.16e-30 | 3 |
vascular associated smooth muscle cell | 1.16e-30 | 3 |
aortic smooth muscle cell | 1.16e-30 | 3 |
smooth muscle myoblast | 1.16e-30 | 3 |
muscle precursor cell | 1.02e-15 | 6 |
muscle cell | 1.02e-15 | 6 |
myoblast | 1.02e-15 | 6 |
mesodermal cell | 1.43e-13 | 7 |
multi-potent skeletal muscle stem cell | 1.06e-10 | 9 |