FFCP PHASE1:Mm9::chr2:181041454..181041465,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=287|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:181041454..181041465,+|id=chr2:181041454..181041465,+|ontology_enrichment_celltype=CL:0000117!2.18e-27!23;CL:0000337!2.18e-27!23;CL:0000540!1.56e-18!33;CL:0000047!1.56e-18!33;CL:0000031!1.56e-18!33;CL:0000404!1.56e-18!33;CL:0002319!4.35e-18!43;CL:0000221!1.76e-17!44;CL:0000133!1.76e-17!44;CL:0000393!1.54e-14!39;CL:0000211!1.54e-14!39;CL:0000055!2.31e-14!50;CL:0002609!2.84e-08!6;CL:0002321!5.39e-08!70;CL:0000220!5.39e-08!70|ontology_enrichment_celltype_v019_2=CL:0000117,5.87e-28,23;CL:0000337,5.87e-28,23;CL:0000540,6.06e-19,33;CL:0000047,6.06e-19,33;CL:0000031,6.06e-19,33;CL:0000404,6.06e-19,33;CL:0002319,1.06e-16,43;CL:0000221,2.82e-16,44;CL:0000133,2.82e-16,44;CL:0000393,9.52e-16,39;CL:0000211,9.52e-16,39;CL:0002614,2.67e-15,3;CL:0000120,5.72e-15,3;CL:0002611,9.28e-11,2;CL:0002321,1.82e-09,70;CL:0002608,3.37e-07,3;CL:0002610,7.29e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.68e-36!73;UBERON:0005743!1.68e-36!73;UBERON:0000073!3.92e-35!75;UBERON:0001016!3.92e-35!75;UBERON:0001049!5.78e-33!52;UBERON:0005068!5.78e-33!52;UBERON:0006241!5.78e-33!52;UBERON:0007135!5.78e-33!52;UBERON:0004121!3.24e-30!102;UBERON:0000924!3.24e-30!102;UBERON:0006601!3.24e-30!102;UBERON:0002346!3.73e-30!71;UBERON:0003075!3.73e-30!71;UBERON:0007284!3.73e-30!71;UBERON:0002616!2.41e-29!49;UBERON:0000955!1.58e-28!50;UBERON:0006238!1.58e-28!50;UBERON:0002020!3.98e-25!34;UBERON:0000033!4.28e-24!63;UBERON:0003080!1.01e-22!40;UBERON:0002780!1.53e-21!39;UBERON:0001890!1.53e-21!39;UBERON:0006240!1.53e-21!39;UBERON:0003056!1.01e-20!49;UBERON:0002791!4.02e-19!29;UBERON:0003528!4.02e-19!29;UBERON:0001893!4.02e-19!29;UBERON:0007811!2.11e-15!86;UBERON:0000956!5.59e-14!21;UBERON:0001869!5.59e-14!21;UBERON:0000203!5.59e-14!21;UBERON:0000153!4.14e-13!94;UBERON:0003076!1.38e-10!12;UBERON:0003057!1.38e-10!12;UBERON:0002619!3.30e-10!17;UBERON:0002298!2.19e-09!6;UBERON:0000025!2.39e-09!114;UBERON:0002240!1.45e-08!6;UBERON:0005174!1.45e-08!6;UBERON:0001137!1.45e-08!6;UBERON:0004111!4.98e-08!122;UBERON:0001948!1.42e-07!5;UBERON:0002315!1.42e-07!5;UBERON:0002950!5.33e-07!4;UBERON:0001891!5.33e-07!4;UBERON:0009616!5.33e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.35e-21,73;UBERON:0001016,3.49e-20,75;UBERON:0002950,2.84e-19,4;UBERON:0001891,2.84e-19,4;UBERON:0009616,2.84e-19,4;UBERON:0010286,2.84e-19,4;UBERON:0000073,2.71e-17,54;UBERON:0002020,1.90e-15,34;UBERON:0004121,2.12e-15,95;UBERON:0000924,2.12e-15,95;UBERON:0006601,2.12e-15,95;UBERON:0002038,2.67e-15,3;UBERON:0009663,2.67e-15,3;UBERON:0009661,2.67e-15,3;UBERON:0000125,2.67e-15,3;UBERON:0002308,2.67e-15,3;UBERON:0001049,2.28e-13,52;UBERON:0005068,2.28e-13,52;UBERON:0006241,2.28e-13,52;UBERON:0007135,2.28e-13,52;UBERON:0003528,3.78e-12,29;UBERON:0002791,3.78e-12,29;UBERON:0001893,3.78e-12,29;UBERON:0002256,9.28e-11,2;UBERON:0002616,1.03e-10,46;UBERON:0002346,1.78e-10,64;UBERON:0003075,1.78e-10,64;UBERON:0007284,1.78e-10,64;UBERON:0000955,1.90e-10,47;UBERON:0006238,1.90e-10,47;UBERON:0003080,2.09e-10,40;UBERON:0002619,1.31e-09,17;UBERON:0010371,6.30e-09,73;UBERON:0002780,1.04e-08,39;UBERON:0001890,1.04e-08,39;UBERON:0006240,1.04e-08,39;UBERON:0003056,3.20e-08,49;UBERON:0002021,8.49e-08,10;UBERON:0000411,8.49e-08,10;UBERON:0001950,8.49e-08,10;UBERON:0000956,1.10e-07,21;UBERON:0001869,1.10e-07,21;UBERON:0000203,1.10e-07,21;UBERON:0004684,7.29e-07,3;UBERON:0002275,7.29e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.21389876515759,2.11596391708813,3.1691570175309,0,0,0,0,0,0.299600110518405,0,0.414758449233911,0.540023753326763,0.630974884054146,1.42825492201902,3.53389665522582,1.10241719293459,0.670918297127655,2.75765635983006,1.10115880999389,1.27687338085188,0.614426133024974,0.923204014111357,0.914876436024097,0,2.51264699101243,2.25105044012672,2.29197371665215,0.883885756421003,0.711858403995515,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,1.04723353406728,0,0,0,0,1.04853447583376,0,0.251308704225729,0.347648640384553,0.255715457330331,0.83115217823824,0.811206315338788,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.493647061806363,0.304464949114599,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0.859265911718438,1.37016503954128,3.0215755895588,1.35004500046361,1.80128481289688,0,0,0,0,0.341467211508268,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr2:181041454..181041465,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=287 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:181041454..181041465,+ | |||
|description=CAGE_peak_at_chr2:181041454..181041465,+ | |||
|id=chr2:181041454..181041465,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.18e-27!23;CL:0000337!2.18e-27!23;CL:0000540!1.56e-18!33;CL:0000047!1.56e-18!33;CL:0000031!1.56e-18!33;CL:0000404!1.56e-18!33;CL:0002319!4.35e-18!43;CL:0000221!1.76e-17!44;CL:0000133!1.76e-17!44;CL:0000393!1.54e-14!39;CL:0000211!1.54e-14!39;CL:0000055!2.31e-14!50;CL:0002609!2.84e-08!6;CL:0002321!5.39e-08!70;CL:0000220!5.39e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.87e-28,23;CL:0000337,5.87e-28,23;CL:0000540,6.06e-19,33;CL:0000047,6.06e-19,33;CL:0000031,6.06e-19,33;CL:0000404,6.06e-19,33;CL:0002319,1.06e-16,43;CL:0000221,2.82e-16,44;CL:0000133,2.82e-16,44;CL:0000393,9.52e-16,39;CL:0000211,9.52e-16,39;CL:0002614,2.67e-15,3;CL:0000120,5.72e-15,3;CL:0002611,9.28e-11,2;CL:0002321,1.82e-09,70;CL:0002608,3.37e-07,3;CL:0002610,7.29e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.68e-36!73;UBERON:0005743!1.68e-36!73;UBERON:0000073!3.92e-35!75;UBERON:0001016!3.92e-35!75;UBERON:0001049!5.78e-33!52;UBERON:0005068!5.78e-33!52;UBERON:0006241!5.78e-33!52;UBERON:0007135!5.78e-33!52;UBERON:0004121!3.24e-30!102;UBERON:0000924!3.24e-30!102;UBERON:0006601!3.24e-30!102;UBERON:0002346!3.73e-30!71;UBERON:0003075!3.73e-30!71;UBERON:0007284!3.73e-30!71;UBERON:0002616!2.41e-29!49;UBERON:0000955!1.58e-28!50;UBERON:0006238!1.58e-28!50;UBERON:0002020!3.98e-25!34;UBERON:0000033!4.28e-24!63;UBERON:0003080!1.01e-22!40;UBERON:0002780!1.53e-21!39;UBERON:0001890!1.53e-21!39;UBERON:0006240!1.53e-21!39;UBERON:0003056!1.01e-20!49;UBERON:0002791!4.02e-19!29;UBERON:0003528!4.02e-19!29;UBERON:0001893!4.02e-19!29;UBERON:0007811!2.11e-15!86;UBERON:0000956!5.59e-14!21;UBERON:0001869!5.59e-14!21;UBERON:0000203!5.59e-14!21;UBERON:0000153!4.14e-13!94;UBERON:0003076!1.38e-10!12;UBERON:0003057!1.38e-10!12;UBERON:0002619!3.30e-10!17;UBERON:0002298!2.19e-09!6;UBERON:0000025!2.39e-09!114;UBERON:0002240!1.45e-08!6;UBERON:0005174!1.45e-08!6;UBERON:0001137!1.45e-08!6;UBERON:0004111!4.98e-08!122;UBERON:0001948!1.42e-07!5;UBERON:0002315!1.42e-07!5;UBERON:0002950!5.33e-07!4;UBERON:0001891!5.33e-07!4;UBERON:0009616!5.33e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.35e-21,73;UBERON:0001016,3.49e-20,75;UBERON:0002950,2.84e-19,4;UBERON:0001891,2.84e-19,4;UBERON:0009616,2.84e-19,4;UBERON:0010286,2.84e-19,4;UBERON:0000073,2.71e-17,54;UBERON:0002020,1.90e-15,34;UBERON:0004121,2.12e-15,95;UBERON:0000924,2.12e-15,95;UBERON:0006601,2.12e-15,95;UBERON:0002038,2.67e-15,3;UBERON:0009663,2.67e-15,3;UBERON:0009661,2.67e-15,3;UBERON:0000125,2.67e-15,3;UBERON:0002308,2.67e-15,3;UBERON:0001049,2.28e-13,52;UBERON:0005068,2.28e-13,52;UBERON:0006241,2.28e-13,52;UBERON:0007135,2.28e-13,52;UBERON:0003528,3.78e-12,29;UBERON:0002791,3.78e-12,29;UBERON:0001893,3.78e-12,29;UBERON:0002256,9.28e-11,2;UBERON:0002616,1.03e-10,46;UBERON:0002346,1.78e-10,64;UBERON:0003075,1.78e-10,64;UBERON:0007284,1.78e-10,64;UBERON:0000955,1.90e-10,47;UBERON:0006238,1.90e-10,47;UBERON:0003080,2.09e-10,40;UBERON:0002619,1.31e-09,17;UBERON:0010371,6.30e-09,73;UBERON:0002780,1.04e-08,39;UBERON:0001890,1.04e-08,39;UBERON:0006240,1.04e-08,39;UBERON:0003056,3.20e-08,49;UBERON:0002021,8.49e-08,10;UBERON:0000411,8.49e-08,10;UBERON:0001950,8.49e-08,10;UBERON:0000956,1.10e-07,21;UBERON:0001869,1.10e-07,21;UBERON:0000203,1.10e-07,21;UBERON:0004684,7.29e-07,3;UBERON:0002275,7.29e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.21389876515759,2.11596391708813,3.1691570175309,0,0,0,0,0,0.299600110518405,0,0.414758449233911,0.540023753326763,0.630974884054146,1.42825492201902,3.53389665522582,1.10241719293459,0.670918297127655,2.75765635983006,1.10115880999389,1.27687338085188,0.614426133024974,0.923204014111357,0.914876436024097,0,2.51264699101243,2.25105044012672,2.29197371665215,0.883885756421003,0.711858403995515,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,1.04723353406728,0,0,0,0,1.04853447583376,0,0.251308704225729,0.347648640384553,0.255715457330331,0.83115217823824,0.811206315338788,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.493647061806363,0.304464949114599,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0.859265911718438,1.37016503954128,3.0215755895588,1.35004500046361,1.80128481289688,0,0,0,0,0.341467211508268,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr2:181041454..181041465,+ | |||
}} |
Latest revision as of 18:09, 4 August 2015
Short description: | p@chr2:181041454..181041465, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:181041454..181041465, + |
Coexpression cluster: | MCL_coexpression_mm9:287 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.87e-28 | 23 |
neuroblast (sensu Vertebrata) | 5.87e-28 | 23 |
neuron | 6.06e-19 | 33 |
neuronal stem cell | 6.06e-19 | 33 |
neuroblast | 6.06e-19 | 33 |
electrically signaling cell | 6.06e-19 | 33 |
neural cell | 1.06e-16 | 43 |
ectodermal cell | 2.82e-16 | 44 |
neurectodermal cell | 2.82e-16 | 44 |
electrically responsive cell | 9.52e-16 | 39 |
electrically active cell | 9.52e-16 | 39 |
neuron of the substantia nigra | 2.67e-15 | 3 |
granule cell | 5.72e-15 | 3 |
neuron of the dorsal spinal cord | 9.28e-11 | 2 |
embryonic cell | 1.82e-09 | 70 |
hippocampal neuron | 3.37e-07 | 3 |
raphe nuclei neuron | 7.29e-07 | 3 |