FFCP PHASE1:Mm9::chr2:38194778..38194798,+: Difference between revisions
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{{FFCP|EntrezGene=16870|HGNC=|MCL_coexpression_id=2347|UniProt=F6Z9H5,Q543C6|association_with_transcript=-2bp_to_ENSMUST00000143783,uc008jnk.1_5end|description=CAGE_peak_3_at_Lhx2_5end|id=chr2:38194778..38194798,+|ontology_enrichment_celltype=CL:0000117!3.24e-09!23;CL:0000337!3.24e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.29e-10,23;CL:0000337,1.29e-10,23;CL:0000120,2.96e-08,3;CL:0002613,6.60e-08,3;CL:0002319,6.63e-08,43;CL:0000221,1.18e-07,44;CL:0000133,1.18e-07,44;CL:0002609,7.06e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!1.73e-20!49;UBERON:0000955!2.49e-19!50;UBERON:0006238!2.49e-19!50;UBERON:0003080!4.11e-19!40;UBERON:0002616!8.81e-19!49;UBERON:0000033!1.43e-18!63;UBERON:0002780!2.45e-18!39;UBERON:0001890!2.45e-18!39;UBERON:0006240!2.45e-18!39;UBERON:0001049!4.50e-16!52;UBERON:0005068!4.50e-16!52;UBERON:0006241!4.50e-16!52;UBERON:0007135!4.50e-16!52;UBERON:0002791!1.59e-15!29;UBERON:0003528!1.59e-15!29;UBERON:0001893!1.59e-15!29;UBERON:0000956!1.78e-15!21;UBERON:0001869!1.78e-15!21;UBERON:0000203!1.78e-15!21;UBERON:0001017!2.77e-14!73;UBERON:0005743!2.77e-14!73;UBERON:0004121!5.02e-14!102;UBERON:0000924!5.02e-14!102;UBERON:0006601!5.02e-14!102;UBERON:0002020!1.15e-13!34;UBERON:0000073!1.80e-13!75;UBERON:0001016!1.80e-13!75;UBERON:0002346!4.36e-13!71;UBERON:0003075!4.36e-13!71;UBERON:0007284!4.36e-13!71;UBERON:0000153!4.40e-13!94;UBERON:0002619!1.03e-11!17;UBERON:0007811!6.77e-11!86;UBERON:0001954!7.56e-07!7;UBERON:0003022!7.56e-07!7;UBERON:0002421!7.56e-07!7;UBERON:0000349!7.56e-07!7;UBERON:0002600!7.56e-07!7|ontology_enrichment_uberon_v019_2=UBERON:0003528,7.75e-22,29;UBERON:0002791,7.75e-22,29;UBERON:0001893,7.75e-22,29;UBERON:0000956,2.30e-21,21;UBERON:0001869,2.30e-21,21;UBERON:0000203,2.30e-21,21;UBERON:0003080,3.21e-20,40;UBERON:0002616,7.68e-19,46;UBERON:0002780,8.74e-19,39;UBERON:0001890,8.74e-19,39;UBERON:0006240,8.74e-19,39;UBERON:0000955,2.52e-18,47;UBERON:0006238,2.52e-18,47;UBERON:0002020,5.77e-18,34;UBERON:0000073,8.48e-17,54;UBERON:0001049,4.80e-16,52;UBERON:0005068,4.80e-16,52;UBERON:0006241,4.80e-16,52;UBERON:0007135,4.80e-16,52;UBERON:0003056,1.47e-15,49;UBERON:0010371,2.58e-15,73;UBERON:0001017,3.01e-15,73;UBERON:0004121,3.13e-15,95;UBERON:0000924,3.13e-15,95;UBERON:0006601,3.13e-15,95;UBERON:0001016,1.13e-14,75;UBERON:0002619,1.32e-13,17;UBERON:0002346,4.85e-12,64;UBERON:0003075,4.85e-12,64;UBERON:0007284,4.85e-12,64;UBERON:0001954,2.99e-08,7;UBERON:0003022,2.99e-08,7;UBERON:0002421,2.99e-08,7;UBERON:0000349,2.99e-08,7;UBERON:0002600,2.99e-08,7;UBERON:0000014,5.47e-08,5;UBERON:0001003,5.47e-08,5;UBERON:0002097,5.47e-08,5;UBERON:0002199,5.47e-08,5;UBERON:0007029,5.47e-08,5;UBERON:0007376,5.47e-08,5;UBERON:0002416,5.47e-08,5;UBERON:0007383,5.47e-08,5;UBERON:0002021,5.06e-07,10;UBERON:0000411,5.06e-07,10;UBERON:0001950,5.06e-07,10;UBERON:0010314,7.95e-07,92|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,4.61340983742391,2.52758868796568,0.139986421625363,0,0,0,0,0,0,0,5.86717736492834,6.34789175126439,3.1691570175309,0,0,0,0,0,0,0,14.8276145601123,10.2604513132085,8.83364837675805,0,0,1.34739879136449,0.575072826109418,0.919218786610021,1.10115880999389,0.766124028511126,0.307213066512487,2.50583946687368,3.29355516968675,3.64639359389732,0,0,0.30559649555362,0.294628585473668,0,0.186399445825301,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3481157546434,0,0.125654352112864,1.56441888173049,1.27857728665165,0.41557608911912,0.486723789203273,0,0,0,0,0.390361328888111,0,0.540186389416048,0.150704817835715,0.340182495756639,0.640568601424249,0.843315521037559,0.258703370739016,0.215567992932842,0.378212160335639,0.527853372491847,0.657587197282725,0.278047249225598,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,8.02655976558419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0.241177159752417,0.25462585178142,0,0,0.274561413188081,2.87536413054709,0,0.624075346229121,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,1.03486947026204,1.28602221018955,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,2.63818004706368,6.13564821444441,3.79971427047382,2.26807453605959,0.984845398470368,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,1.12950368523413,2.30162618253588,0.572895513439397,1.03111909406213,1.37016503954128,0.755393897389701,0.675022500231806,0,1.35942722695261,2.07104124700728,1.03787347584177,2.79317411380722,1.19513524027894,0,0.838452650511929,0.919217542250071,0.44449345560323,0.412070114477788,0.962757628775446,0.252697211763798,0.25347929989024,0.565879024158229,0.655490552289177,0.512201219238954,1.09127391015665,0.476293691283074,0.811190281613988,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0.715308569841963,0.726732083161643,1.12931256498397,0.507687647350059,0.182927972872773,0.526139422875686,0.543216455383447,0.561142271657738,0.711810108745045,0.886540341380071,0.818462086339379,1.23949472948773,0.771626443924566,2.99772693525535,1.63752125911786,1.50409737833809,0.382576664137687,0.441182838239031,0|short_description=p3@Lhx2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16870 | |||
|HGNC= | |||
|MCL_coexpression_id=2347 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F6Z9H5,uniprot:Q543C6 | |||
|association_with_transcript=-2bp_to_ENSMUST00000143783,uc008jnk.1_5end | |||
|cluster_id=chr2:38194778..38194798,+ | |||
|description=CAGE_peak_3_at_Lhx2_5end | |||
|id=chr2:38194778..38194798,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.24e-09!23;CL:0000337!3.24e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.29e-10,23;CL:0000337,1.29e-10,23;CL:0000120,2.96e-08,3;CL:0002613,6.60e-08,3;CL:0002319,6.63e-08,43;CL:0000221,1.18e-07,44;CL:0000133,1.18e-07,44;CL:0002609,7.06e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!1.73e-20!49;UBERON:0000955!2.49e-19!50;UBERON:0006238!2.49e-19!50;UBERON:0003080!4.11e-19!40;UBERON:0002616!8.81e-19!49;UBERON:0000033!1.43e-18!63;UBERON:0002780!2.45e-18!39;UBERON:0001890!2.45e-18!39;UBERON:0006240!2.45e-18!39;UBERON:0001049!4.50e-16!52;UBERON:0005068!4.50e-16!52;UBERON:0006241!4.50e-16!52;UBERON:0007135!4.50e-16!52;UBERON:0002791!1.59e-15!29;UBERON:0003528!1.59e-15!29;UBERON:0001893!1.59e-15!29;UBERON:0000956!1.78e-15!21;UBERON:0001869!1.78e-15!21;UBERON:0000203!1.78e-15!21;UBERON:0001017!2.77e-14!73;UBERON:0005743!2.77e-14!73;UBERON:0004121!5.02e-14!102;UBERON:0000924!5.02e-14!102;UBERON:0006601!5.02e-14!102;UBERON:0002020!1.15e-13!34;UBERON:0000073!1.80e-13!75;UBERON:0001016!1.80e-13!75;UBERON:0002346!4.36e-13!71;UBERON:0003075!4.36e-13!71;UBERON:0007284!4.36e-13!71;UBERON:0000153!4.40e-13!94;UBERON:0002619!1.03e-11!17;UBERON:0007811!6.77e-11!86;UBERON:0001954!7.56e-07!7;UBERON:0003022!7.56e-07!7;UBERON:0002421!7.56e-07!7;UBERON:0000349!7.56e-07!7;UBERON:0002600!7.56e-07!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,7.75e-22,29;UBERON:0002791,7.75e-22,29;UBERON:0001893,7.75e-22,29;UBERON:0000956,2.30e-21,21;UBERON:0001869,2.30e-21,21;UBERON:0000203,2.30e-21,21;UBERON:0003080,3.21e-20,40;UBERON:0002616,7.68e-19,46;UBERON:0002780,8.74e-19,39;UBERON:0001890,8.74e-19,39;UBERON:0006240,8.74e-19,39;UBERON:0000955,2.52e-18,47;UBERON:0006238,2.52e-18,47;UBERON:0002020,5.77e-18,34;UBERON:0000073,8.48e-17,54;UBERON:0001049,4.80e-16,52;UBERON:0005068,4.80e-16,52;UBERON:0006241,4.80e-16,52;UBERON:0007135,4.80e-16,52;UBERON:0003056,1.47e-15,49;UBERON:0010371,2.58e-15,73;UBERON:0001017,3.01e-15,73;UBERON:0004121,3.13e-15,95;UBERON:0000924,3.13e-15,95;UBERON:0006601,3.13e-15,95;UBERON:0001016,1.13e-14,75;UBERON:0002619,1.32e-13,17;UBERON:0002346,4.85e-12,64;UBERON:0003075,4.85e-12,64;UBERON:0007284,4.85e-12,64;UBERON:0001954,2.99e-08,7;UBERON:0003022,2.99e-08,7;UBERON:0002421,2.99e-08,7;UBERON:0000349,2.99e-08,7;UBERON:0002600,2.99e-08,7;UBERON:0000014,5.47e-08,5;UBERON:0001003,5.47e-08,5;UBERON:0002097,5.47e-08,5;UBERON:0002199,5.47e-08,5;UBERON:0007029,5.47e-08,5;UBERON:0007376,5.47e-08,5;UBERON:0002416,5.47e-08,5;UBERON:0007383,5.47e-08,5;UBERON:0002021,5.06e-07,10;UBERON:0000411,5.06e-07,10;UBERON:0001950,5.06e-07,10;UBERON:0010314,7.95e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,4.61340983742391,2.52758868796568,0.139986421625363,0,0,0,0,0,0,0,5.86717736492834,6.34789175126439,3.1691570175309,0,0,0,0,0,0,0,14.8276145601123,10.2604513132085,8.83364837675805,0,0,1.34739879136449,0.575072826109418,0.919218786610021,1.10115880999389,0.766124028511126,0.307213066512487,2.50583946687368,3.29355516968675,3.64639359389732,0,0,0.30559649555362,0.294628585473668,0,0.186399445825301,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3481157546434,0,0.125654352112864,1.56441888173049,1.27857728665165,0.41557608911912,0.486723789203273,0,0,0,0,0.390361328888111,0,0.540186389416048,0.150704817835715,0.340182495756639,0.640568601424249,0.843315521037559,0.258703370739016,0.215567992932842,0.378212160335639,0.527853372491847,0.657587197282725,0.278047249225598,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,8.02655976558419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0.241177159752417,0.25462585178142,0,0,0.274561413188081,2.87536413054709,0,0.624075346229121,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,1.03486947026204,1.28602221018955,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,2.63818004706368,6.13564821444441,3.79971427047382,2.26807453605959,0.984845398470368,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,1.12950368523413,2.30162618253588,0.572895513439397,1.03111909406213,1.37016503954128,0.755393897389701,0.675022500231806,0,1.35942722695261,2.07104124700728,1.03787347584177,2.79317411380722,1.19513524027894,0,0.838452650511929,0.919217542250071,0.44449345560323,0.412070114477788,0.962757628775446,0.252697211763798,0.25347929989024,0.565879024158229,0.655490552289177,0.512201219238954,1.09127391015665,0.476293691283074,0.811190281613988,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0.715308569841963,0.726732083161643,1.12931256498397,0.507687647350059,0.182927972872773,0.526139422875686,0.543216455383447,0.561142271657738,0.711810108745045,0.886540341380071,0.818462086339379,1.23949472948773,0.771626443924566,2.99772693525535,1.63752125911786,1.50409737833809,0.382576664137687,0.441182838239031,0 | |||
|short_description=p3@Lhx2 | |||
}} |
Revision as of 03:49, 5 August 2015
Short description: | p3@Lhx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lhx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2347 |
Association with transcript: | -2bp_to_ENSMUST00000143783, uc008jnk.1_5end |
EntrezGene: | 16870 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.29e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.29e-10 | 23 |
granule cell | 2.96e-08 | 3 |
striatum neuron | 6.60e-08 | 3 |
neural cell | 6.63e-08 | 43 |
ectodermal cell | 1.18e-07 | 44 |
neurectodermal cell | 1.18e-07 | 44 |
neuron of cerebral cortex | 7.06e-07 | 6 |