FFCP PHASE1:Mm9::chr2:38206580..38206600,+: Difference between revisions
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{{FFCP|EntrezGene=16870|HGNC=|MCL_coexpression_id=2347|UniProt=Q9Z0S2,Q543C6|association_with_transcript=-227bp_to_ENSMUST00000000253,NM_010710,uc008jnl.1_5end|description=CAGE_peak_2_at_Lhx2_5end|id=chr2:38206580..38206600,+|ontology_enrichment_celltype=CL:0000117!2.49e-07!23;CL:0000337!2.49e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,9.26e-07,23;CL:0000337,9.26e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!2.81e-24!49;UBERON:0000033!1.12e-20!63;UBERON:0003080!1.83e-18!40;UBERON:0002780!2.96e-18!39;UBERON:0001890!2.96e-18!39;UBERON:0006240!2.96e-18!39;UBERON:0000955!1.34e-17!50;UBERON:0006238!1.34e-17!50;UBERON:0002616!3.00e-17!49;UBERON:0002346!7.60e-17!71;UBERON:0003075!7.60e-17!71;UBERON:0007284!7.60e-17!71;UBERON:0002791!2.03e-16!29;UBERON:0003528!2.03e-16!29;UBERON:0001893!2.03e-16!29;UBERON:0000153!2.16e-16!94;UBERON:0004121!5.24e-16!102;UBERON:0000924!5.24e-16!102;UBERON:0006601!5.24e-16!102;UBERON:0001049!2.22e-15!52;UBERON:0005068!2.22e-15!52;UBERON:0006241!2.22e-15!52;UBERON:0007135!2.22e-15!52;UBERON:0002020!1.77e-14!34;UBERON:0000956!2.77e-14!21;UBERON:0001869!2.77e-14!21;UBERON:0000203!2.77e-14!21;UBERON:0001017!1.14e-13!73;UBERON:0005743!1.14e-13!73;UBERON:0007811!1.61e-13!86;UBERON:0000073!1.29e-12!75;UBERON:0001016!1.29e-12!75;UBERON:0002619!2.35e-11!17;UBERON:0002021!1.29e-07!10;UBERON:0000411!1.29e-07!10;UBERON:0001950!1.29e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.34e-27,49;UBERON:0003080,1.27e-20,40;UBERON:0002780,2.32e-20,39;UBERON:0001890,2.32e-20,39;UBERON:0006240,2.32e-20,39;UBERON:0010371,1.22e-19,73;UBERON:0003528,1.06e-18,29;UBERON:0002791,1.06e-18,29;UBERON:0001893,1.06e-18,29;UBERON:0002346,1.72e-18,64;UBERON:0003075,1.72e-18,64;UBERON:0007284,1.72e-18,64;UBERON:0000955,9.64e-18,47;UBERON:0006238,9.64e-18,47;UBERON:0002616,2.50e-17,46;UBERON:0004121,4.63e-17,95;UBERON:0000924,4.63e-17,95;UBERON:0006601,4.63e-17,95;UBERON:0000956,5.19e-17,21;UBERON:0001869,5.19e-17,21;UBERON:0000203,5.19e-17,21;UBERON:0000073,2.54e-15,54;UBERON:0002020,6.19e-15,34;UBERON:0001049,3.33e-14,52;UBERON:0005068,3.33e-14,52;UBERON:0006241,3.33e-14,52;UBERON:0007135,3.33e-14,52;UBERON:0002619,1.88e-13,17;UBERON:0001017,5.83e-12,73;UBERON:0001016,3.39e-11,75;UBERON:0002021,6.42e-09,10;UBERON:0000411,6.42e-09,10;UBERON:0001950,6.42e-09,10;UBERON:0000970,8.74e-08,9;UBERON:0000019,8.74e-08,9;UBERON:0000047,8.74e-08,9;UBERON:0010312,8.74e-08,9;UBERON:0004088,8.74e-08,9;UBERON:0002104,8.74e-08,9;UBERON:0001456,8.74e-08,9;UBERON:0003072,8.74e-08,9;UBERON:0004128,8.74e-08,9;UBERON:0003071,8.74e-08,9;UBERON:0010314,1.45e-07,92|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,2.111830832275,2.10658073689794,0,0,0,0.262261207256992,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,34.2299495517301,21.3095597252438,17.6931208157598,2.93971485413261,0,0,0,0,0,0,0,63.9320016316329,39.1453324661304,65.9184659646426,0.677689064138264,0,0,0,0,0.898800331555214,1.92109152660777,124.945982831716,115.0250594586,135.44927511029,0,0.220868540951614,22.5383070555515,20.1275489138296,34.9303138911808,2.20231761998777,3.70293280447044,1.99688493233117,33.1034582202787,21.0421580285542,41.6730696445408,0.837548997004143,1.12552522006336,2.44477196442896,1.17851434189467,0.427115042397309,0.559198337475902,0,0,1.15945795480671,6.88339101585109,0.679971333707751,0.539703191637817,1.29955283489534,1.34408066129201,1.54488862144927,0.340860645156116,0.259786004602869,0,0,0,2.54805239706646,0,0,0,0,1.25602267690966,1.03575153458869,0,0.867426633830679,0,0.230615497256059,0.452167921657868,0.470354828542819,0,0,0,0.884610551949874,0,0,0,0,0.292780797011547,0,0,0,0,0,5.09288173976397,8.23501085073528,7.413606774659,34.0695667576862,24.2929684463814,2.70124457927428,6.32740925964255,0.203678727700633,0,0,6.52369753248069,40.2072168754754,28.5078609497506,41.5943519850357,39.3339574551216,51.8438123533118,51.7579429950793,47.8815812500214,11.3829483125167,43.760302565367,27.231275544166,22.6976950171494,7.45265490253754,7.50727572909114,3.1342694986995,3.70407845534298,0,0,0,0,0.828503090142008,0.703578179943289,0,0.23674473558521,0,0,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0,26.7068234676442,67.4025211084313,0.330418782983798,0,0.853153002140936,0.696710015581316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,3.85388415213294,6.17326891149548,4.12773889737726,2.02375901146368,3.44862206360455,3.13530307678142,1.78238096246994,2.87696137450811,5.35046248357617,1.37280706594041,25.8782771749238,6.32639611036456,5.92871578917665,5.80931419278357,2.69096120282868,4.82443521363367,0,1.32643988239339,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.963303539926752,0.820481806145422,0,0.504941854408746,0,0,0.430846795465598,0.238968797952552,0.222798674082394,0.566153061577665,0,0,0,7.06906896127976,0,0.178065603667255,0.1628869593535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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16870 | |||
|HGNC= | |||
|MCL_coexpression_id=2347 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9Z0S2,uniprot:Q543C6 | |||
|association_with_transcript=-227bp_to_ENSMUST00000000253,NM_010710,uc008jnl.1_5end | |||
|cluster_id=chr2:38206580..38206600,+ | |||
|description=CAGE_peak_2_at_Lhx2_5end | |||
|id=chr2:38206580..38206600,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.49e-07!23;CL:0000337!2.49e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.26e-07,23;CL:0000337,9.26e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.81e-24!49;UBERON:0000033!1.12e-20!63;UBERON:0003080!1.83e-18!40;UBERON:0002780!2.96e-18!39;UBERON:0001890!2.96e-18!39;UBERON:0006240!2.96e-18!39;UBERON:0000955!1.34e-17!50;UBERON:0006238!1.34e-17!50;UBERON:0002616!3.00e-17!49;UBERON:0002346!7.60e-17!71;UBERON:0003075!7.60e-17!71;UBERON:0007284!7.60e-17!71;UBERON:0002791!2.03e-16!29;UBERON:0003528!2.03e-16!29;UBERON:0001893!2.03e-16!29;UBERON:0000153!2.16e-16!94;UBERON:0004121!5.24e-16!102;UBERON:0000924!5.24e-16!102;UBERON:0006601!5.24e-16!102;UBERON:0001049!2.22e-15!52;UBERON:0005068!2.22e-15!52;UBERON:0006241!2.22e-15!52;UBERON:0007135!2.22e-15!52;UBERON:0002020!1.77e-14!34;UBERON:0000956!2.77e-14!21;UBERON:0001869!2.77e-14!21;UBERON:0000203!2.77e-14!21;UBERON:0001017!1.14e-13!73;UBERON:0005743!1.14e-13!73;UBERON:0007811!1.61e-13!86;UBERON:0000073!1.29e-12!75;UBERON:0001016!1.29e-12!75;UBERON:0002619!2.35e-11!17;UBERON:0002021!1.29e-07!10;UBERON:0000411!1.29e-07!10;UBERON:0001950!1.29e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.34e-27,49;UBERON:0003080,1.27e-20,40;UBERON:0002780,2.32e-20,39;UBERON:0001890,2.32e-20,39;UBERON:0006240,2.32e-20,39;UBERON:0010371,1.22e-19,73;UBERON:0003528,1.06e-18,29;UBERON:0002791,1.06e-18,29;UBERON:0001893,1.06e-18,29;UBERON:0002346,1.72e-18,64;UBERON:0003075,1.72e-18,64;UBERON:0007284,1.72e-18,64;UBERON:0000955,9.64e-18,47;UBERON:0006238,9.64e-18,47;UBERON:0002616,2.50e-17,46;UBERON:0004121,4.63e-17,95;UBERON:0000924,4.63e-17,95;UBERON:0006601,4.63e-17,95;UBERON:0000956,5.19e-17,21;UBERON:0001869,5.19e-17,21;UBERON:0000203,5.19e-17,21;UBERON:0000073,2.54e-15,54;UBERON:0002020,6.19e-15,34;UBERON:0001049,3.33e-14,52;UBERON:0005068,3.33e-14,52;UBERON:0006241,3.33e-14,52;UBERON:0007135,3.33e-14,52;UBERON:0002619,1.88e-13,17;UBERON:0001017,5.83e-12,73;UBERON:0001016,3.39e-11,75;UBERON:0002021,6.42e-09,10;UBERON:0000411,6.42e-09,10;UBERON:0001950,6.42e-09,10;UBERON:0000970,8.74e-08,9;UBERON:0000019,8.74e-08,9;UBERON:0000047,8.74e-08,9;UBERON:0010312,8.74e-08,9;UBERON:0004088,8.74e-08,9;UBERON:0002104,8.74e-08,9;UBERON:0001456,8.74e-08,9;UBERON:0003072,8.74e-08,9;UBERON:0004128,8.74e-08,9;UBERON:0003071,8.74e-08,9;UBERON:0010314,1.45e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,2.111830832275,2.10658073689794,0,0,0,0.262261207256992,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,34.2299495517301,21.3095597252438,17.6931208157598,2.93971485413261,0,0,0,0,0,0,0,63.9320016316329,39.1453324661304,65.9184659646426,0.677689064138264,0,0,0,0,0.898800331555214,1.92109152660777,124.945982831716,115.0250594586,135.44927511029,0,0.220868540951614,22.5383070555515,20.1275489138296,34.9303138911808,2.20231761998777,3.70293280447044,1.99688493233117,33.1034582202787,21.0421580285542,41.6730696445408,0.837548997004143,1.12552522006336,2.44477196442896,1.17851434189467,0.427115042397309,0.559198337475902,0,0,1.15945795480671,6.88339101585109,0.679971333707751,0.539703191637817,1.29955283489534,1.34408066129201,1.54488862144927,0.340860645156116,0.259786004602869,0,0,0,2.54805239706646,0,0,0,0,1.25602267690966,1.03575153458869,0,0.867426633830679,0,0.230615497256059,0.452167921657868,0.470354828542819,0,0,0,0.884610551949874,0,0,0,0,0.292780797011547,0,0,0,0,0,5.09288173976397,8.23501085073528,7.413606774659,34.0695667576862,24.2929684463814,2.70124457927428,6.32740925964255,0.203678727700633,0,0,6.52369753248069,40.2072168754754,28.5078609497506,41.5943519850357,39.3339574551216,51.8438123533118,51.7579429950793,47.8815812500214,11.3829483125167,43.760302565367,27.231275544166,22.6976950171494,7.45265490253754,7.50727572909114,3.1342694986995,3.70407845534298,0,0,0,0,0.828503090142008,0.703578179943289,0,0.23674473558521,0,0,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0,26.7068234676442,67.4025211084313,0.330418782983798,0,0.853153002140936,0.696710015581316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,3.85388415213294,6.17326891149548,4.12773889737726,2.02375901146368,3.44862206360455,3.13530307678142,1.78238096246994,2.87696137450811,5.35046248357617,1.37280706594041,25.8782771749238,6.32639611036456,5.92871578917665,5.80931419278357,2.69096120282868,4.82443521363367,0,1.32643988239339,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.963303539926752,0.820481806145422,0,0.504941854408746,0,0,0.430846795465598,0.238968797952552,0.222798674082394,0.566153061577665,0,0,0,7.06906896127976,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,15.8453762747553,15.3936833701478,12.8602221018955,2.48276327099183,4.10248280484762,2.13913726782757,3.95804433848979,0.469343416127421,2.54198485036584,0,49.9605346412685,31.9699564857893,29.4930202898682,28.5299902167496,30.5302073525814,0,0.18542530201051,0,0,0.185194527369712,0.188368457004691,0,0,0.169978429993855,0,0.276399947608848,0.954670618015114,1.42351197111511,0,0.108005340821801,0,0,0.404593039154462,0.743881101528023,0,0,0.621339313086926,0,0,0.165458490457098,0,0.258319646955462,0,0,0.651021924219751,2.72634295506848,2.41584120826006,0.576060012515731,0.316011120628178,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0,0,0.201932899896295,0.228620419965,0.302478555410522,0.194915761479505,0.288635524920988,0,0,0,0.0897138566094757,0.335769232728157,0,0,0,0,0,33.3203587144069,37.2863441570813,37.2382083735608,49.6655696973257,29.4585483501376,47.5898155355511,33.7511250115903,40.9792294934041,33.9856806738153,32.1011393286128,20.2385327789145,36.7102883528949,17.4148277869217,10.6966955510049,15.7209871970987,9.74370594785075,8.00088220085815,7.62329711783909,6.4183841918363,7.58091635291392,6.33698249725599,7.1678009726709,7.86588662747012,6.21043978327232,5.39893408182765,10.4784612082276,7.3007125345259,6.17309505483856,7.41754621445952,6.91834924631667,9.94320831917705,6.92155644021416,4.5302876089991,7.55801366488108,7.52875043322645,7.69992931814256,7.68297486065645,6.31367307450823,4.6173398707593,5.05028044491965,7.23673610557462,6.10727790728493,6.95692773388472,7.59190521811233,5.98010494041538,19.4852250791598,7.01794825336225,11.1732948105115,1.53030665655075,1.98532277207564,0 | |||
|short_description=p2@Lhx2 | |||
}} |
Revision as of 03:50, 5 August 2015
Short description: | p2@Lhx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lhx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2347 |
Association with transcript: | -227bp_to_ENSMUST00000000253, NM_010710, uc008jnl.1_5end |
EntrezGene: | 16870 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.26e-07 | 23 |
neuroblast (sensu Vertebrata) | 9.26e-07 | 23 |