FFCP PHASE1:Mm9::chr5:115879729..115879743,+: Difference between revisions
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{{FFCP|EntrezGene=17690|HGNC=|MCL_coexpression_id=22|UniProt=|association_with_transcript=21bp_to_ENSMUST00000151444_5end|description=CAGE_peak_5_at_Msi1_5end|id=chr5:115879729..115879743,+|ontology_enrichment_celltype=CL:0000540!4.89e-13!33;CL:0000047!4.89e-13!33;CL:0000031!4.89e-13!33;CL:0000404!4.89e-13!33;CL:0000221!7.83e-13!44;CL:0000133!7.83e-13!44;CL:0002319!8.69e-13!43;CL:0000117!2.92e-10!23;CL:0000337!2.92e-10!23;CL:0000393!4.47e-10!39;CL:0000211!4.47e-10!39;CL:0000055!8.92e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.34e-17,23;CL:0000337,3.34e-17,23;CL:0000540,1.67e-16,33;CL:0000047,1.67e-16,33;CL:0000031,1.67e-16,33;CL:0000404,1.67e-16,33;CL:0002319,4.32e-16,43;CL:0000221,1.56e-15,44;CL:0000133,1.56e-15,44;CL:0000393,7.65e-13,39;CL:0000211,7.65e-13,39;CL:0002609,7.96e-09,6;CL:0002321,7.44e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.49e-27!73;UBERON:0005743!2.49e-27!73;UBERON:0004121!2.48e-26!102;UBERON:0000924!2.48e-26!102;UBERON:0006601!2.48e-26!102;UBERON:0002346!1.25e-25!71;UBERON:0003075!1.25e-25!71;UBERON:0007284!1.25e-25!71;UBERON:0000073!1.28e-25!75;UBERON:0001016!1.28e-25!75;UBERON:0000033!3.39e-22!63;UBERON:0003056!1.08e-21!49;UBERON:0001049!2.60e-20!52;UBERON:0005068!2.60e-20!52;UBERON:0006241!2.60e-20!52;UBERON:0007135!2.60e-20!52;UBERON:0000955!1.04e-17!50;UBERON:0006238!1.04e-17!50;UBERON:0002616!3.91e-17!49;UBERON:0003080!5.39e-16!40;UBERON:0002780!2.13e-15!39;UBERON:0001890!2.13e-15!39;UBERON:0006240!2.13e-15!39;UBERON:0002020!1.42e-12!34;UBERON:0002791!1.33e-10!29;UBERON:0003528!1.33e-10!29;UBERON:0001893!1.33e-10!29;UBERON:0000153!1.65e-10!94;UBERON:0007811!2.73e-10!86;UBERON:0000956!1.65e-07!21;UBERON:0001869!1.65e-07!21;UBERON:0000203!1.65e-07!21;UBERON:0000970!9.69e-07!9;UBERON:0000019!9.69e-07!9;UBERON:0000047!9.69e-07!9;UBERON:0004088!9.69e-07!9;UBERON:0002104!9.69e-07!9;UBERON:0001456!9.69e-07!9;UBERON:0003072!9.69e-07!9;UBERON:0003071!9.69e-07!9;UBERON:0004128!9.69e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.46e-40,64;UBERON:0003075,3.46e-40,64;UBERON:0007284,3.46e-40,64;UBERON:0004121,2.00e-36,95;UBERON:0000924,2.00e-36,95;UBERON:0006601,2.00e-36,95;UBERON:0010371,7.97e-35,73;UBERON:0001017,3.99e-34,73;UBERON:0003056,5.80e-33,49;UBERON:0001016,8.29e-33,75;UBERON:0001049,7.06e-29,52;UBERON:0005068,7.06e-29,52;UBERON:0006241,7.06e-29,52;UBERON:0007135,7.06e-29,52;UBERON:0000073,2.74e-27,54;UBERON:0000955,3.28e-26,47;UBERON:0006238,3.28e-26,47;UBERON:0002616,3.49e-25,46;UBERON:0010314,1.77e-24,92;UBERON:0003080,7.81e-23,40;UBERON:0002780,8.75e-22,39;UBERON:0001890,8.75e-22,39;UBERON:0006240,8.75e-22,39;UBERON:0002020,7.42e-16,34;UBERON:0003528,2.25e-13,29;UBERON:0002791,2.25e-13,29;UBERON:0001893,2.25e-13,29;UBERON:0000970,3.21e-11,9;UBERON:0000019,3.21e-11,9;UBERON:0000047,3.21e-11,9;UBERON:0010312,3.21e-11,9;UBERON:0004088,3.21e-11,9;UBERON:0002104,3.21e-11,9;UBERON:0001456,3.21e-11,9;UBERON:0003072,3.21e-11,9;UBERON:0004128,3.21e-11,9;UBERON:0003071,3.21e-11,9;UBERON:0001894,7.38e-10,10;UBERON:0006222,7.38e-10,10;UBERON:0000020,2.10e-09,12;UBERON:0001032,2.10e-09,12;UBERON:0004456,2.10e-09,12;UBERON:0001444,9.30e-09,11;UBERON:0000033,1.75e-08,13;UBERON:0005085,1.75e-08,13;UBERON:0000007,2.04e-08,8;UBERON:0003296,2.04e-08,8;UBERON:0010133,2.04e-08,8;UBERON:0002420,9.64e-08,8;UBERON:0007245,9.64e-08,8;UBERON:0010009,9.64e-08,8;UBERON:0010011,9.64e-08,8;UBERON:0000454,9.64e-08,8;UBERON:0000369,1.14e-07,5;UBERON:0002435,1.14e-07,5;UBERON:0000204,1.14e-07,5;UBERON:0010082,1.14e-07,5;UBERON:0000956,1.35e-07,21;UBERON:0001869,1.35e-07,21;UBERON:0000203,1.35e-07,21;UBERON:0000025,4.99e-07,114|phase1_expression=1.12104192973356,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0.577703239502549,0.332469290716985,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,1.74420125104357,0.659058548203415,1.36100929351998,0.419959264876088,1.43752564364972,0,0,0,0,0,0,4.85559506063035,3.70293685490423,4.43681982454325,0,0,0,0,0,0.299600110518405,2.30530983192933,4.87341177849845,4.05017814995072,3.99617426567626,0.571301968807607,1.10434270475807,3.55223317723367,5.07980996396653,1.83843757322004,0,0.255374676170375,1.22885226604995,5.67111037239834,5.30628332893976,4.68822033501084,1.11673199600552,0,1.5279824777681,1.17851434189467,1.28134512719193,3.35519002485541,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0,0.230615497256059,0.301445281105245,0.23517741427141,0.251333182659351,0,0,0,0,0.220841518460394,0,0,0.878342391034642,2.09446706813455,0,0,0,0,2.24685959107234,1.83000241127451,2.63874139437015,0.695297280769106,1.02286182932132,1.24672826735736,1.1356888414743,0.101839363850316,0.124406970610093,0.252722758433675,1.05220927943237,3.6433724029557,3.90833577536904,3.78130472591233,2.26057226753573,7.27990540919208,5.50888997224854,4.12287588062807,1.03481348295606,2.58681591519411,1.51284864134255,0.527853372491847,0.219195732427575,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0,0.473489471170421,0,0,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0,0,0,0,1.05144974282064,5.04232600658494,0,0,0.853153002140936,0,0.257734922644187,0.201683524623343,0.22237804384487,0.570676878337677,0,0.329397909448022,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0,2.46568271239006,1.02823661348756,1.1270773567308,0.407302655690628,0.775809948670503,0.98190147846446,0.505892296994058,0,0,0,0,0,0.786235980452812,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.814824882210129,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0.289298117163023,0,0,0,0,1.76605648986571,1.87538698547525,0,0.252470927204373,0.631016438832513,1.17131623288992,1.07711698866399,0.477937595905104,0.891194696329576,1.13230612315533,1.21443210502468,0.584511715822624,0.790575555893047,1.92792789853084,0.141940085208269,0.35613120733451,0.488660878060728,0.329940245945071,0,0,0.604647113929502,0,0,0,0.516856586336442,0,0.356497378384721,0,0,0,1.02131881726136,1.98067203434441,2.58717367565509,1.50035924522115,1.77340233642274,2.31879462882692,1.15184314421485,1.2178597964584,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0.238744688006273,0.492422699235184,0.291480836629851,1.48340241608408,0,0,0,0,0,0,0,0,0,0,1.10717597753397,0.203319467126849,0.324016022465404,0,0,0,0.330613822901344,0.523511883968059,0.129614973291793,0,1.12738587736838,0.448549638131936,0.496375471371293,0.583353565032143,0,0.168956125490778,0.58678619322877,0.911430693907651,1.67774951081137,0.483168241652012,0,0,0.405450430580328,0.102710957164827,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.0897138566094757,0.167884616364078,0,0,0.183151624267265,0.214368379079066,0,1.6942555278512,0.920650473014354,1.14579102687879,1.20297227640581,0.685082519770642,0,0.675022500231806,0,1.35942722695261,0.51776031175182,2.07574695168353,4.78829848081237,1.87806966329548,0.972426868273176,2.09613162627982,0.183843508450014,0.44449345560323,0.824140228955577,0,0.252697211763798,0.50695859978048,0.754505365544305,0.187283014939765,0.89635213366817,0.804096565378586,0.476293691283074,0.695305955669133,1.35036454324594,0.824171801606613,0.883193520806384,0.342869252385415,0.887379030796687,0.238436189947321,0.436039249896986,0.188218760830661,0.423073039458382,0.365855945745545,1.05227884575137,0.814824683075171,0.561142271657738,0.830445126869219,0.788035859004508,0.818462086339379,0.154936841185966,0.964533054905707,2.49810577937946,0.467863216890817,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p5@Msi1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17690 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=21bp_to_ENSMUST00000151444_5end | |||
|cluster_id=chr5:115879729..115879743,+ | |||
|description=CAGE_peak_5_at_Msi1_5end | |||
|id=chr5:115879729..115879743,+ | |||
|ontology_enrichment_celltype=CL:0000540!4.89e-13!33;CL:0000047!4.89e-13!33;CL:0000031!4.89e-13!33;CL:0000404!4.89e-13!33;CL:0000221!7.83e-13!44;CL:0000133!7.83e-13!44;CL:0002319!8.69e-13!43;CL:0000117!2.92e-10!23;CL:0000337!2.92e-10!23;CL:0000393!4.47e-10!39;CL:0000211!4.47e-10!39;CL:0000055!8.92e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.34e-17,23;CL:0000337,3.34e-17,23;CL:0000540,1.67e-16,33;CL:0000047,1.67e-16,33;CL:0000031,1.67e-16,33;CL:0000404,1.67e-16,33;CL:0002319,4.32e-16,43;CL:0000221,1.56e-15,44;CL:0000133,1.56e-15,44;CL:0000393,7.65e-13,39;CL:0000211,7.65e-13,39;CL:0002609,7.96e-09,6;CL:0002321,7.44e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.49e-27!73;UBERON:0005743!2.49e-27!73;UBERON:0004121!2.48e-26!102;UBERON:0000924!2.48e-26!102;UBERON:0006601!2.48e-26!102;UBERON:0002346!1.25e-25!71;UBERON:0003075!1.25e-25!71;UBERON:0007284!1.25e-25!71;UBERON:0000073!1.28e-25!75;UBERON:0001016!1.28e-25!75;UBERON:0000033!3.39e-22!63;UBERON:0003056!1.08e-21!49;UBERON:0001049!2.60e-20!52;UBERON:0005068!2.60e-20!52;UBERON:0006241!2.60e-20!52;UBERON:0007135!2.60e-20!52;UBERON:0000955!1.04e-17!50;UBERON:0006238!1.04e-17!50;UBERON:0002616!3.91e-17!49;UBERON:0003080!5.39e-16!40;UBERON:0002780!2.13e-15!39;UBERON:0001890!2.13e-15!39;UBERON:0006240!2.13e-15!39;UBERON:0002020!1.42e-12!34;UBERON:0002791!1.33e-10!29;UBERON:0003528!1.33e-10!29;UBERON:0001893!1.33e-10!29;UBERON:0000153!1.65e-10!94;UBERON:0007811!2.73e-10!86;UBERON:0000956!1.65e-07!21;UBERON:0001869!1.65e-07!21;UBERON:0000203!1.65e-07!21;UBERON:0000970!9.69e-07!9;UBERON:0000019!9.69e-07!9;UBERON:0000047!9.69e-07!9;UBERON:0004088!9.69e-07!9;UBERON:0002104!9.69e-07!9;UBERON:0001456!9.69e-07!9;UBERON:0003072!9.69e-07!9;UBERON:0003071!9.69e-07!9;UBERON:0004128!9.69e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.46e-40,64;UBERON:0003075,3.46e-40,64;UBERON:0007284,3.46e-40,64;UBERON:0004121,2.00e-36,95;UBERON:0000924,2.00e-36,95;UBERON:0006601,2.00e-36,95;UBERON:0010371,7.97e-35,73;UBERON:0001017,3.99e-34,73;UBERON:0003056,5.80e-33,49;UBERON:0001016,8.29e-33,75;UBERON:0001049,7.06e-29,52;UBERON:0005068,7.06e-29,52;UBERON:0006241,7.06e-29,52;UBERON:0007135,7.06e-29,52;UBERON:0000073,2.74e-27,54;UBERON:0000955,3.28e-26,47;UBERON:0006238,3.28e-26,47;UBERON:0002616,3.49e-25,46;UBERON:0010314,1.77e-24,92;UBERON:0003080,7.81e-23,40;UBERON:0002780,8.75e-22,39;UBERON:0001890,8.75e-22,39;UBERON:0006240,8.75e-22,39;UBERON:0002020,7.42e-16,34;UBERON:0003528,2.25e-13,29;UBERON:0002791,2.25e-13,29;UBERON:0001893,2.25e-13,29;UBERON:0000970,3.21e-11,9;UBERON:0000019,3.21e-11,9;UBERON:0000047,3.21e-11,9;UBERON:0010312,3.21e-11,9;UBERON:0004088,3.21e-11,9;UBERON:0002104,3.21e-11,9;UBERON:0001456,3.21e-11,9;UBERON:0003072,3.21e-11,9;UBERON:0004128,3.21e-11,9;UBERON:0003071,3.21e-11,9;UBERON:0001894,7.38e-10,10;UBERON:0006222,7.38e-10,10;UBERON:0000020,2.10e-09,12;UBERON:0001032,2.10e-09,12;UBERON:0004456,2.10e-09,12;UBERON:0001444,9.30e-09,11;UBERON:0000033,1.75e-08,13;UBERON:0005085,1.75e-08,13;UBERON:0000007,2.04e-08,8;UBERON:0003296,2.04e-08,8;UBERON:0010133,2.04e-08,8;UBERON:0002420,9.64e-08,8;UBERON:0007245,9.64e-08,8;UBERON:0010009,9.64e-08,8;UBERON:0010011,9.64e-08,8;UBERON:0000454,9.64e-08,8;UBERON:0000369,1.14e-07,5;UBERON:0002435,1.14e-07,5;UBERON:0000204,1.14e-07,5;UBERON:0010082,1.14e-07,5;UBERON:0000956,1.35e-07,21;UBERON:0001869,1.35e-07,21;UBERON:0000203,1.35e-07,21;UBERON:0000025,4.99e-07,114 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0.577703239502549,0.332469290716985,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,1.74420125104357,0.659058548203415,1.36100929351998,0.419959264876088,1.43752564364972,0,0,0,0,0,0,4.85559506063035,3.70293685490423,4.43681982454325,0,0,0,0,0,0.299600110518405,2.30530983192933,4.87341177849845,4.05017814995072,3.99617426567626,0.571301968807607,1.10434270475807,3.55223317723367,5.07980996396653,1.83843757322004,0,0.255374676170375,1.22885226604995,5.67111037239834,5.30628332893976,4.68822033501084,1.11673199600552,0,1.5279824777681,1.17851434189467,1.28134512719193,3.35519002485541,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0,0.230615497256059,0.301445281105245,0.23517741427141,0.251333182659351,0,0,0,0,0.220841518460394,0,0,0.878342391034642,2.09446706813455,0,0,0,0,2.24685959107234,1.83000241127451,2.63874139437015,0.695297280769106,1.02286182932132,1.24672826735736,1.1356888414743,0.101839363850316,0.124406970610093,0.252722758433675,1.05220927943237,3.6433724029557,3.90833577536904,3.78130472591233,2.26057226753573,7.27990540919208,5.50888997224854,4.12287588062807,1.03481348295606,2.58681591519411,1.51284864134255,0.527853372491847,0.219195732427575,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0,0.473489471170421,0,0,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0,0,0,0,1.05144974282064,5.04232600658494,0,0,0.853153002140936,0,0.257734922644187,0.201683524623343,0.22237804384487,0.570676878337677,0,0.329397909448022,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0,2.46568271239006,1.02823661348756,1.1270773567308,0.407302655690628,0.775809948670503,0.98190147846446,0.505892296994058,0,0,0,0,0,0.786235980452812,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.814824882210129,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0.289298117163023,0,0,0,0,1.76605648986571,1.87538698547525,0,0.252470927204373,0.631016438832513,1.17131623288992,1.07711698866399,0.477937595905104,0.891194696329576,1.13230612315533,1.21443210502468,0.584511715822624,0.790575555893047,1.92792789853084,0.141940085208269,0.35613120733451,0.488660878060728,0.329940245945071,0,0,0.604647113929502,0,0,0,0.516856586336442,0,0.356497378384721,0,0,0,1.02131881726136,1.98067203434441,2.58717367565509,1.50035924522115,1.77340233642274,2.31879462882692,1.15184314421485,1.2178597964584,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0.238744688006273,0.492422699235184,0.291480836629851,1.48340241608408,0,0,0,0,0,0,0,0,0,0,1.10717597753397,0.203319467126849,0.324016022465404,0,0,0,0.330613822901344,0.523511883968059,0.129614973291793,0,1.12738587736838,0.448549638131936,0.496375471371293,0.583353565032143,0,0.168956125490778,0.58678619322877,0.911430693907651,1.67774951081137,0.483168241652012,0,0,0.405450430580328,0.102710957164827,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.0897138566094757,0.167884616364078,0,0,0.183151624267265,0.214368379079066,0,1.6942555278512,0.920650473014354,1.14579102687879,1.20297227640581,0.685082519770642,0,0.675022500231806,0,1.35942722695261,0.51776031175182,2.07574695168353,4.78829848081237,1.87806966329548,0.972426868273176,2.09613162627982,0.183843508450014,0.44449345560323,0.824140228955577,0,0.252697211763798,0.50695859978048,0.754505365544305,0.187283014939765,0.89635213366817,0.804096565378586,0.476293691283074,0.695305955669133,1.35036454324594,0.824171801606613,0.883193520806384,0.342869252385415,0.887379030796687,0.238436189947321,0.436039249896986,0.188218760830661,0.423073039458382,0.365855945745545,1.05227884575137,0.814824683075171,0.561142271657738,0.830445126869219,0.788035859004508,0.818462086339379,0.154936841185966,0.964533054905707,2.49810577937946,0.467863216890817,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p5@Msi1 | |||
}} |
Revision as of 02:48, 6 August 2015
Short description: | p5@Msi1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Msi1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 21bp_to_ENSMUST00000151444_5end |
EntrezGene: | 17690 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.34e-17 | 23 |
neuroblast (sensu Vertebrata) | 3.34e-17 | 23 |
neuron | 1.67e-16 | 33 |
neuronal stem cell | 1.67e-16 | 33 |
neuroblast | 1.67e-16 | 33 |
electrically signaling cell | 1.67e-16 | 33 |
neural cell | 4.32e-16 | 43 |
ectodermal cell | 1.56e-15 | 44 |
neurectodermal cell | 1.56e-15 | 44 |
electrically responsive cell | 7.65e-13 | 39 |
electrically active cell | 7.65e-13 | 39 |
neuron of cerebral cortex | 7.96e-09 | 6 |
embryonic cell | 7.44e-07 | 70 |