FFCP PHASE1:Hg19::chr9:113800467..113800520,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3166 | |||
|TSSclassifier=strong | |||
|UniProt=Q92633,Q5VZX0 | |||
|association_with_transcript=-102bp_to_ENST00000358883,NM_001401,NM_057159,uc004bfb.2,uc004bfc.2,uc011lwn.1_5end | |||
|coexpression_cluster_id=C2016 | |||
|description=CAGE_peak_2_at_LPAR1_5end | |||
|id=chr9:113800467..113800520,- | |||
|ontology_enrichment_celltype=CL:0000055!1.04e-23!180;CL:0000057!1.66e-19!75;CL:0000680!1.14e-10!57;CL:0000056!1.14e-10!57;CL:0000355!1.14e-10!57;CL:0000187!7.04e-10!54;CL:0000183!7.50e-10!59;CL:0000393!1.84e-07!60;CL:0000211!1.84e-07!60;CL:0002620!1.95e-07!23;CL:0000192!3.59e-07!42;CL:0000514!3.59e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000057;4.94e-08;73!CL:0002620;8.24e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.63e-20,76;CL:0000680,1.90e-11,58;CL:0000056,1.90e-11,58;CL:0000355,1.90e-11,58;CL:0000187,1.37e-10,55;CL:0002620,6.07e-08,23;CL:0000393,7.86e-08,61;CL:0000211,7.86e-08,61;CL:0000192,1.16e-07,43;CL:0000514,1.16e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.65e-29!365;UBERON:0000481!5.41e-21!347;UBERON:0000468!1.68e-17!659;UBERON:0000914!1.01e-16!83;UBERON:0002329!1.01e-16!83;UBERON:0003077!1.01e-16!83;UBERON:0003059!1.01e-16!83;UBERON:0007282!1.01e-16!83;UBERON:0009618!1.01e-16!83;UBERON:0007285!1.01e-16!83;UBERON:0000033!1.45e-16!123;UBERON:0002616!5.21e-16!59;UBERON:0000153!8.00e-16!129;UBERON:0007811!8.00e-16!129;UBERON:0001049!1.27e-15!57;UBERON:0005068!1.27e-15!57;UBERON:0006241!1.27e-15!57;UBERON:0007135!1.27e-15!57;UBERON:0000955!2.17e-15!69;UBERON:0006238!2.17e-15!69;UBERON:0007023!3.94e-15!115;UBERON:0000119!3.45e-14!312;UBERON:0001017!5.85e-14!82;UBERON:0000483!1.29e-13!309;UBERON:0004290!5.10e-13!70;UBERON:0004121!8.20e-13!169;UBERON:0005743!9.87e-13!86;UBERON:0000073!1.01e-12!94;UBERON:0001016!1.01e-12!94;UBERON:0003075!1.05e-12!86;UBERON:0007284!1.05e-12!86;UBERON:0000924!1.10e-12!173;UBERON:0006601!1.10e-12!173;UBERON:0000477!1.10e-12!286;UBERON:0000467!1.29e-12!625;UBERON:0000922!1.70e-12!612;UBERON:0002346!2.33e-12!90;UBERON:0000480!2.33e-12!626;UBERON:0002050!3.97e-12!605;UBERON:0005423!3.97e-12!605;UBERON:0003102!7.00e-12!95;UBERON:0000479!7.48e-12!787;UBERON:0000923!7.75e-12!604;UBERON:0005291!7.75e-12!604;UBERON:0006598!7.75e-12!604;UBERON:0002532!7.75e-12!604;UBERON:0000486!9.53e-12!82;UBERON:0003080!1.05e-11!42;UBERON:0002780!1.86e-11!41;UBERON:0001890!1.86e-11!41;UBERON:0006240!1.86e-11!41;UBERON:0002385!2.44e-11!63;UBERON:0001015!2.44e-11!63;UBERON:0000383!2.44e-11!63;UBERON:0005256!2.74e-11!143;UBERON:0000062!2.92e-11!511;UBERON:0001134!3.97e-11!61;UBERON:0002036!3.97e-11!61;UBERON:0003082!3.97e-11!61;UBERON:0001893!1.07e-10!34;UBERON:0002020!1.35e-10!34;UBERON:0003528!1.35e-10!34;UBERON:0002791!2.95e-10!33;UBERON:0001869!1.42e-09!32;UBERON:0002100!2.92e-09!216;UBERON:0004111!3.87e-09!241;UBERON:0003056!2.22e-08!61;UBERON:0000064!2.70e-08!219;UBERON:0002619!6.52e-08!22;UBERON:0001950!2.67e-07!20;UBERON:0000025!5.87e-07!194;UBERON:0000956!8.03e-07!25;UBERON:0000203!8.03e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.14e-10;34!UBERON:0003528;1.61e-09;34!UBERON:0002020;1.61e-09;34!UBERON:0002791;2.37e-09;32!UBERON:0001869;3.31e-09;32!UBERON:0002780;3.42e-09;41!UBERON:0001890;3.42e-09;41!UBERON:0000073;1.19e-08;53!UBERON:0002616;1.19e-08;53!UBERON:0002619;2.84e-08;22!UBERON:0001017;9.17e-08;75!UBERON:0001950;1.27e-07;20!UBERON:0002385;2.33e-07;31!UBERON:0001015;2.33e-07;31!UBERON:0000383;2.33e-07;31!UBERON:0000956;2.77e-07;25!UBERON:0000203;2.77e-07;25!UBERON:0000955;2.91e-07;68!UBERON:0002384;5.05e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.41e-20,132;UBERON:0000955,1.68e-16,68;UBERON:0006238,1.68e-16,68;UBERON:0001049,1.87e-16,56;UBERON:0005068,1.87e-16,56;UBERON:0006241,1.87e-16,56;UBERON:0007135,1.87e-16,56;UBERON:0007023,4.63e-15,114;UBERON:0007524,9.73e-15,73;UBERON:0000073,1.17e-14,53;UBERON:0002616,1.17e-14,53;UBERON:0001016,1.57e-14,89;UBERON:0001017,1.68e-14,81;UBERON:0003077,3.45e-14,72;UBERON:0007285,3.45e-14,72;UBERON:0000119,6.28e-14,309;UBERON:0003075,6.67e-14,82;UBERON:0007284,6.67e-14,82;UBERON:0002329,9.96e-14,71;UBERON:0003059,9.96e-14,71;UBERON:0007282,9.96e-14,71;UBERON:0004290,9.96e-14,71;UBERON:0009618,9.96e-14,71;UBERON:0004121,1.10e-13,171;UBERON:0000924,1.10e-13,171;UBERON:0006601,1.10e-13,171;UBERON:0000479,1.12e-13,773;UBERON:0002346,1.30e-13,86;UBERON:0000483,2.47e-13,306;UBERON:0011216,3.16e-12,223;UBERON:0002780,3.28e-12,41;UBERON:0001890,3.28e-12,41;UBERON:0003080,3.28e-12,41;UBERON:0006240,3.28e-12,41;UBERON:0007503,4.92e-12,78;UBERON:0000486,5.00e-12,83;UBERON:0002385,6.50e-12,64;UBERON:0001015,6.50e-12,64;UBERON:0000383,6.50e-12,64;UBERON:0003104,1.10e-11,160;UBERON:0009142,1.10e-11,160;UBERON:0001134,1.11e-11,62;UBERON:0002036,1.11e-11,62;UBERON:0003082,1.11e-11,62;UBERON:0001893,1.19e-11,34;UBERON:0003528,1.54e-11,34;UBERON:0002020,1.54e-11,34;UBERON:0010371,5.82e-11,104;UBERON:0002791,1.53e-10,32;UBERON:0001869,2.00e-10,32;UBERON:0000923,2.06e-10,560;UBERON:0010316,2.06e-10,560;UBERON:0005291,2.06e-10,560;UBERON:0006598,2.06e-10,560;UBERON:0010317,2.06e-10,560;UBERON:0002532,2.06e-10,560;UBERON:0003102,3.08e-10,99;UBERON:0002050,3.80e-10,564;UBERON:0005256,8.38e-10,122;UBERON:0005423,3.42e-09,581;UBERON:0004111,9.85e-09,240;UBERON:0003056,1.76e-08,61;UBERON:0002619,1.84e-08,22;UBERON:0000922,2.14e-08,592;UBERON:0001950,8.52e-08,20;UBERON:0000956,2.00e-07,25;UBERON:0000203,2.00e-07,25 | |||
|phase1_expression=19.9846217197612,19.9113487218614,25.9356103536587,31.0227224894704,49.6126814814289,31.4041868676133,10.1319951267324,9.47579810140246,10.7086107561934,0.737201809504527,0.697801167972428,1.09220686065086,0,35.8922423584135,56.0061564980178,3.36162573225888,3.01347264011988,4.38186054232424,6.34312638427659,1.23121058076788,5.30401797235058,2.82109249330279,2.0036519099174,0,1.50651167513763,0.382067028739756,0.656804715599566,1.02324015707783,0.393364276848904,0,0,0,1.50602959389125,0.739508020333575,0,0,0,0,0.200544447470142,0.434021741431704,2.46307021663917,2.26725566213286,4.12120908214698,0,0,0.242584061187816,0.929716147622738,0.411167888021826,0.309706370895104,0.28769239232215,0,0.709446689665756,0,0,0,0.376484679085209,0,0.224723484445085,0,0,0,0,0,0.426224750532694,0.580418477257168,0.56738522469114,0.622822248995575,0.251248665256743,0,0.65156653411535,0.605399502633369,0,0,0,0,0.209658645508376,0.336985893439485,0.600707571366025,0.64290234678832,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,7.31420598941885,2.68280343881454,6.64885321586358,16.62620100969,8.02140657017423,14.0501123391999,10.3387173116643,9.24606253575008,0.0945348171640679,0.443458794925128,0.351339142772504,3.1434978119451,0.728590576585084,0,0,0.348259474598534,0.664789802594326,0.238490624305342,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0.366403487860815,0,0,0,4.96971951695318,6.58478660655815,6.62045904066094,16.6365240034312,7.09336764396714,3.92474320099615,1.06748995729705,0.49333509683432,7.46906484959439,3.09834545760283,2.7788523529288,19.5251081661962,21.31850920576,15.2308930691968,5.93104145977609,1.71141546463335,11.8064457635923,10.4516703792951,9.87424960645602,10.9551629227754,20.6195712967442,18.6708162313887,42.3635702820638,76.0321828660514,31.4029000183767,13.6524204290704,12.2165084108761,12.793544660509,20.5194372590021,21.8880651232505,22.3878586649227,10.1140972613676,39.2121333746218,1.02088964844019,6.27863724911017,8.32873816392413,6.56988893594642,7.50227740211006,10.4083054530823,11.8514648420989,8.00302482225836,5.90717162844432,6.52827934580031,8.58274832429989,6.16734320903406,22.1455097841772,13.845374108148,5.74286959897549,8.98671139245584,0.386521706326594,1.09098448236334,1.14721838155602,0.853815942907168,0.530119073285941,0.464775771478074,1.14027160516907,0.252320850875628,0.36497735907583,17.2094485562798,5.14592750554308,1.38134921352481,17.6459812652152,20.2126254867484,0.118306800039844,0,0.482022059766964,0.220587945464788,0.871517776369625,0,0.134831308160164,0.196221465125346,0,0,0,2.4694440679884,4.41026134156626,0,0,1.18157981336281,0,0.737930631258681,1.02940686179115,0.109750285408626,0,0.502644862058154,0.462942225792648,18.2452650973782,11.4392826380754,1.44331342025273,0.463721619900307,1.40890433082986,0,0,0,0,0,1.23108503043699,1.17002132569619,1.18904929830983,0,0.839910640994298,0.850650583454319,0.268675568108545,1.16253575405585,0,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0.253991577168676,0,0,0,0.514137463516618,0,0,10.5403219284639,5.23152082599936,5.4270331507503,3.23179289394444,25.0359512096318,2.535908257668,2.92531928243358,4.16029747645464,7.20180647933998,5.67396528093113,7.45982101245078,15.7275793023962,19.5343777940919,4.11620168390384,2.60588947434988,15.637245744672,5.543663110534,0.301439377059586,0.871533458600294,0.699810938274399,0,0,0,3.83399768786532,3.44585807502342,4.27910715122155,9.70034754672781,11.3011977402711,5.55088986043676,0,0,0,0,0.508189248444927,1.30139853857622,0,0.502548796003046,0.637938751653163,0,0,0.414415513436035,62.8180437601996,27.5093786582822,58.0507150717434,9.98260135347874,10.3488813502354,8.98903765693428,9.25417178442434,14.4454127869305,11.3703752027992,26.9029985360513,6.64225598535437,8.48098175291834,15.8128178331911,15.859893754482,10.9805895619474,0,0.215714200818617,0.106727557803444,0.606255142892519,1.66435439510497,2.72151263996712,7.44323423456331,5.83155498494637,10.3844234940237,15.5048370599398,10.2341449813341,5.79074116116987,17.8101679733989,7.40206530252747,5.68197521002007,12.483327714099,6.75030757938707,9.64546141217662,1.93375119346596,1.40354529212299,0.276242966807689,8.38145471601629,17.8449344646583,29.5029933658704,1.35359883872224,0.385076685522074,0,2.92278449306521,0.211103257785751,0,0,1.72732732881711,3.08454505380579,1.62567862526312,1.50506932156456,1.01950509218015,0,1.11937377361089,0,0,0,0.656029291399411,0,4.84292754744295,0.732555718546747,0.990113999047056,1.72279661398852,1.95018073810956,6.42735719376638,11.0204618853019,9.08886840976402,4.60511024178389,8.82154063900996,16.3278772199776,14.2116360035944,6.81813019328807,7.74578710126615,0.495854746082934,0.960950336825531,2.93509238737543,0.2023155617111,1.85938219718914,15.4258049947014,6.970372701606,3.38836938193698,5.32306030317022,6.08953094452551,2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| |||
|short_description=p2@LPAR1 | |||
}} |
Revision as of 02:45, 23 January 2014
Short description: | p2@LPAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LPAR1_5end |
Coexpression cluster: | C2016_Fibroblast_corpus_Nucleus_Anulus_globus_tridermal_Synoviocyte |
Association with transcript: | -102bp_to_ENST00000358883, NM_001401, NM_057159, uc004bfb.2, uc004bfc.2, uc011lwn.1_5end |
EntrezGene: | LPAR1 |
HGNC: | 3166 |
UniProt: | Q92633Q5VZX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.63e-20 | 76 |
muscle precursor cell | 1.90e-11 | 58 |
myoblast | 1.90e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.90e-11 | 58 |
muscle cell | 1.37e-10 | 55 |
skin fibroblast | 6.07e-08 | 23 |
electrically responsive cell | 7.86e-08 | 61 |
electrically active cell | 7.86e-08 | 61 |
smooth muscle cell | 1.16e-07 | 43 |
smooth muscle myoblast | 1.16e-07 | 43 |