FFCP PHASE1:Mm9::chr6:103461006..103461072,+: Difference between revisions
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{{FFCP|EntrezGene=12661|HGNC=|MCL_coexpression_id=1203|UniProt=|association_with_transcript=-95bp_to_uc009dcl.1_5end|description=CAGE_peak_3_at_Chl1_5end|id=chr6:103461006..103461072,+|ontology_enrichment_celltype=CL:0002319!2.03e-14!43;CL:0000221!2.33e-14!44;CL:0000133!2.33e-14!44;CL:0000540!2.62e-14!33;CL:0000047!2.62e-14!33;CL:0000031!2.62e-14!33;CL:0000404!2.62e-14!33;CL:0000055!3.74e-10!50;CL:0000393!4.45e-10!39;CL:0000211!4.45e-10!39;CL:0000117!1.28e-08!23;CL:0000337!1.28e-08!23;CL:0000107!4.17e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,6.01e-17,33;CL:0000047,6.01e-17,33;CL:0000031,6.01e-17,33;CL:0000404,6.01e-17,33;CL:0002319,2.85e-16,43;CL:0000221,1.48e-15,44;CL:0000133,1.48e-15,44;CL:0000393,2.37e-12,39;CL:0000211,2.37e-12,39;CL:0000117,4.43e-10,23;CL:0000337,4.43e-10,23;CL:0000107,2.93e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.28e-27!75;UBERON:0001016!6.28e-27!75;UBERON:0004121!2.63e-26!102;UBERON:0000924!2.63e-26!102;UBERON:0006601!2.63e-26!102;UBERON:0001017!5.26e-26!73;UBERON:0005743!5.26e-26!73;UBERON:0001049!1.15e-16!52;UBERON:0005068!1.15e-16!52;UBERON:0006241!1.15e-16!52;UBERON:0007135!1.15e-16!52;UBERON:0002020!4.30e-16!34;UBERON:0002346!9.73e-16!71;UBERON:0003075!9.73e-16!71;UBERON:0007284!9.73e-16!71;UBERON:0000033!1.64e-15!63;UBERON:0000955!2.20e-15!50;UBERON:0006238!2.20e-15!50;UBERON:0002616!5.35e-15!49;UBERON:0002791!1.03e-13!29;UBERON:0003528!1.03e-13!29;UBERON:0001893!1.03e-13!29;UBERON:0003080!1.59e-12!40;UBERON:0002780!5.13e-12!39;UBERON:0001890!5.13e-12!39;UBERON:0006240!5.13e-12!39;UBERON:0003056!1.19e-11!49;UBERON:0000956!9.05e-11!21;UBERON:0001869!9.05e-11!21;UBERON:0000203!9.05e-11!21;UBERON:0002619!4.58e-09!17;UBERON:0000010!1.00e-07!11;UBERON:0000153!1.33e-07!94;UBERON:0002021!1.36e-07!10;UBERON:0000411!1.36e-07!10;UBERON:0001950!1.36e-07!10;UBERON:0002410!4.17e-07!9;UBERON:0000468!9.30e-07!333;UBERON:0007811!9.94e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.71e-30,95;UBERON:0000924,1.71e-30,95;UBERON:0006601,1.71e-30,95;UBERON:0001016,2.51e-30,75;UBERON:0001017,3.16e-29,73;UBERON:0010371,1.38e-20,73;UBERON:0000073,1.14e-19,54;UBERON:0002020,4.19e-19,34;UBERON:0001049,9.05e-19,52;UBERON:0005068,9.05e-19,52;UBERON:0006241,9.05e-19,52;UBERON:0007135,9.05e-19,52;UBERON:0002346,1.42e-18,64;UBERON:0003075,1.42e-18,64;UBERON:0007284,1.42e-18,64;UBERON:0003528,3.15e-16,29;UBERON:0002791,3.15e-16,29;UBERON:0001893,3.15e-16,29;UBERON:0000955,8.90e-16,47;UBERON:0006238,8.90e-16,47;UBERON:0002616,2.52e-15,46;UBERON:0003080,5.83e-14,40;UBERON:0002780,2.35e-13,39;UBERON:0001890,2.35e-13,39;UBERON:0006240,2.35e-13,39;UBERON:0000956,1.12e-12,21;UBERON:0001869,1.12e-12,21;UBERON:0000203,1.12e-12,21;UBERON:0003056,5.56e-12,49;UBERON:0002619,1.28e-10,17;UBERON:0010314,4.57e-09,92;UBERON:0000010,5.26e-09,11;UBERON:0002021,7.63e-09,10;UBERON:0000411,7.63e-09,10;UBERON:0001950,7.63e-09,10;UBERON:0002410,2.93e-08,9|phase1_expression=2.5623815536767,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,1.09843091367236,2.13872888981712,0.699932108126813,1.43752564364972,0,0,0,0,0,0.515672092277442,2.02316460859598,2.64495489636016,2.53532561402472,0,0,0,0,0,2.69640099466564,3.84218305321555,7.05089363697648,3.37514845829227,5.8890989178387,4.85606673486466,3.75476519617743,3.67472397644862,1.62937300731002,1.83843757322004,3.30347642998166,6.76742891851495,7.21950706304344,2.76961204233407,4.02545631850602,4.16730696445408,5.58365998002762,6.75315132038016,6.1119299110724,12.6690291753677,18.7930618654816,5.77838282058432,1.81742863999642,19.3463193873371,0,0,0,0,1.29955283489534,0,1.26399978118577,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0,0,0.68510327831436,4.91981978929626,0.890652834388949,0.173485326766136,0,0,0.452167921657868,1.17588707135705,0.628332956648377,0,1.3013942122792,0,0.485300549842228,0.220841518460394,0,1.86391761218122,17.8596286177044,20.3163305609051,1.02182822083437,0,0,0.127070227073065,8.83764772488454,5.49000723382352,7.66491547888473,15.6441888173049,12.2743419518559,7.48036960414416,7.78758062725237,0.305518091550949,0.497627882440372,0.252722758433675,2.10441855886474,0,0.459804208866946,0.180062129805349,1.80845781402858,0.612328492361951,1.0249097622788,1.03071897015702,1.03481348295606,0.215567992932842,0,0.351902248327898,0.43839146485515,6.67313398141435,9.05455632957633,11.5237996388448,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0.656669856316381,0.162137619091711,0.730999937126662,0,0.268412837520744,20.1878350621562,25.4174392576833,0,0.264450566663544,0,0,0.515469845288373,0.80673409849337,0.22237804384487,0.380451252225118,0.949058123089023,1.15289268306808,1.50801125280162,2.18852119245266,1.9496408711912,0,0.432276099749388,1.39398891278057,0,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0.470996183524124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12661 | |||
|HGNC= | |||
|MCL_coexpression_id=1203 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-95bp_to_uc009dcl.1_5end | |||
|cluster_id=chr6:103461006..103461072,+ | |||
|description=CAGE_peak_3_at_Chl1_5end | |||
|id=chr6:103461006..103461072,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.03e-14!43;CL:0000221!2.33e-14!44;CL:0000133!2.33e-14!44;CL:0000540!2.62e-14!33;CL:0000047!2.62e-14!33;CL:0000031!2.62e-14!33;CL:0000404!2.62e-14!33;CL:0000055!3.74e-10!50;CL:0000393!4.45e-10!39;CL:0000211!4.45e-10!39;CL:0000117!1.28e-08!23;CL:0000337!1.28e-08!23;CL:0000107!4.17e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.01e-17,33;CL:0000047,6.01e-17,33;CL:0000031,6.01e-17,33;CL:0000404,6.01e-17,33;CL:0002319,2.85e-16,43;CL:0000221,1.48e-15,44;CL:0000133,1.48e-15,44;CL:0000393,2.37e-12,39;CL:0000211,2.37e-12,39;CL:0000117,4.43e-10,23;CL:0000337,4.43e-10,23;CL:0000107,2.93e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.28e-27!75;UBERON:0001016!6.28e-27!75;UBERON:0004121!2.63e-26!102;UBERON:0000924!2.63e-26!102;UBERON:0006601!2.63e-26!102;UBERON:0001017!5.26e-26!73;UBERON:0005743!5.26e-26!73;UBERON:0001049!1.15e-16!52;UBERON:0005068!1.15e-16!52;UBERON:0006241!1.15e-16!52;UBERON:0007135!1.15e-16!52;UBERON:0002020!4.30e-16!34;UBERON:0002346!9.73e-16!71;UBERON:0003075!9.73e-16!71;UBERON:0007284!9.73e-16!71;UBERON:0000033!1.64e-15!63;UBERON:0000955!2.20e-15!50;UBERON:0006238!2.20e-15!50;UBERON:0002616!5.35e-15!49;UBERON:0002791!1.03e-13!29;UBERON:0003528!1.03e-13!29;UBERON:0001893!1.03e-13!29;UBERON:0003080!1.59e-12!40;UBERON:0002780!5.13e-12!39;UBERON:0001890!5.13e-12!39;UBERON:0006240!5.13e-12!39;UBERON:0003056!1.19e-11!49;UBERON:0000956!9.05e-11!21;UBERON:0001869!9.05e-11!21;UBERON:0000203!9.05e-11!21;UBERON:0002619!4.58e-09!17;UBERON:0000010!1.00e-07!11;UBERON:0000153!1.33e-07!94;UBERON:0002021!1.36e-07!10;UBERON:0000411!1.36e-07!10;UBERON:0001950!1.36e-07!10;UBERON:0002410!4.17e-07!9;UBERON:0000468!9.30e-07!333;UBERON:0007811!9.94e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.71e-30,95;UBERON:0000924,1.71e-30,95;UBERON:0006601,1.71e-30,95;UBERON:0001016,2.51e-30,75;UBERON:0001017,3.16e-29,73;UBERON:0010371,1.38e-20,73;UBERON:0000073,1.14e-19,54;UBERON:0002020,4.19e-19,34;UBERON:0001049,9.05e-19,52;UBERON:0005068,9.05e-19,52;UBERON:0006241,9.05e-19,52;UBERON:0007135,9.05e-19,52;UBERON:0002346,1.42e-18,64;UBERON:0003075,1.42e-18,64;UBERON:0007284,1.42e-18,64;UBERON:0003528,3.15e-16,29;UBERON:0002791,3.15e-16,29;UBERON:0001893,3.15e-16,29;UBERON:0000955,8.90e-16,47;UBERON:0006238,8.90e-16,47;UBERON:0002616,2.52e-15,46;UBERON:0003080,5.83e-14,40;UBERON:0002780,2.35e-13,39;UBERON:0001890,2.35e-13,39;UBERON:0006240,2.35e-13,39;UBERON:0000956,1.12e-12,21;UBERON:0001869,1.12e-12,21;UBERON:0000203,1.12e-12,21;UBERON:0003056,5.56e-12,49;UBERON:0002619,1.28e-10,17;UBERON:0010314,4.57e-09,92;UBERON:0000010,5.26e-09,11;UBERON:0002021,7.63e-09,10;UBERON:0000411,7.63e-09,10;UBERON:0001950,7.63e-09,10;UBERON:0002410,2.93e-08,9 | |||
|phase1_expression=2.5623815536767,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,1.09843091367236,2.13872888981712,0.699932108126813,1.43752564364972,0,0,0,0,0,0.515672092277442,2.02316460859598,2.64495489636016,2.53532561402472,0,0,0,0,0,2.69640099466564,3.84218305321555,7.05089363697648,3.37514845829227,5.8890989178387,4.85606673486466,3.75476519617743,3.67472397644862,1.62937300731002,1.83843757322004,3.30347642998166,6.76742891851495,7.21950706304344,2.76961204233407,4.02545631850602,4.16730696445408,5.58365998002762,6.75315132038016,6.1119299110724,12.6690291753677,18.7930618654816,5.77838282058432,1.81742863999642,19.3463193873371,0,0,0,0,1.29955283489534,0,1.26399978118577,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0,0,0.68510327831436,4.91981978929626,0.890652834388949,0.173485326766136,0,0,0.452167921657868,1.17588707135705,0.628332956648377,0,1.3013942122792,0,0.485300549842228,0.220841518460394,0,1.86391761218122,17.8596286177044,20.3163305609051,1.02182822083437,0,0,0.127070227073065,8.83764772488454,5.49000723382352,7.66491547888473,15.6441888173049,12.2743419518559,7.48036960414416,7.78758062725237,0.305518091550949,0.497627882440372,0.252722758433675,2.10441855886474,0,0.459804208866946,0.180062129805349,1.80845781402858,0.612328492361951,1.0249097622788,1.03071897015702,1.03481348295606,0.215567992932842,0,0.351902248327898,0.43839146485515,6.67313398141435,9.05455632957633,11.5237996388448,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0.656669856316381,0.162137619091711,0.730999937126662,0,0.268412837520744,20.1878350621562,25.4174392576833,0,0.264450566663544,0,0,0.515469845288373,0.80673409849337,0.22237804384487,0.380451252225118,0.949058123089023,1.15289268306808,1.50801125280162,2.18852119245266,1.9496408711912,0,0.432276099749388,1.39398891278057,0,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0.470996183524124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0.472905432318573,0.44292937929755,0,0.983179888294428,0.345369963731791,0.144649058581512,0,0,0,0,8.34863067936518,8.43924143463863,0,0.252470927204373,8.51872192423893,6.24701990874622,17.8801420118223,23.6579109973027,27.1814382380521,26.3261173633614,17.0020494703456,16.9508397588561,13.8350722281283,4.81981974632711,0.141940085208269,1.24645922567079,0.651547837414304,0.164970122972535,0,0.242780636154981,0.604647113929502,0.377210159511796,0.590603785761546,0.614870295887855,0.258428293168221,0,1.06949213515416,1.58018378967908,3.16255825724996,2.06271086496374,1.02131881726136,0,0,0.214337035031592,0.354680467284547,0.356737635204141,1.64549020602121,1.2178597964584,0,0,2.20528398054962,32.977250588296,14.0474051225438,10.2531972377865,9.90790455226033,11.9822856813895,1.1659233465194,8.34413859047294,0,1.23832120777933,0,0.376736914009382,0,0,0,0,0,0.954670618015114,0,3.45643094115643,4.96824567780286,7.94535524854981,8.07941485860857,12.2726555210187,9.58780086413897,6.02038666563268,0.648074866458964,1.24267862617385,0,0,0,0.583353565032143,0.129159823477731,0,0,0.2604087696879,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,30.1551410208231,0,0,0,2.31827512838629,0,0.36630324853453,6.00231461421384,0,14.1187960654267,14.2700823317225,13.7494923225455,15.2949332285882,12.3314853558716,11.3309084608455,17.550585006027,18.9134905354173,14.9536994964788,13.9795284172991,0.31136204275253,0,0.682934423016537,3.64660075602441,1.88651846365184,0.919217542250071,4.22268782823069,3.09052585858341,4.49286893428541,1.26348605881899,2.78827229879264,3.39527414494937,3.27745276144588,3.90553429669703,2.92920891673628,2.85776214769844,3.59241410429052,2.70072908649187,2.06042950401653,3.38557516309114,2.74295401908332,2.12970967391205,4.76872379894642,5.52316383202848,3.95259397744389,2.79228206042532,2.74391959309159,2.89376682581627,2.44447404922551,1.68342681497322,2.01679530811096,2.06859412988683,3.27384834535751,4.64810523557898,6.17301155139652,3.99696924700713,6.08222181958062,6.23126056740065,2.67803664896381,1.10295709559758,1.39120701372253 | |||
|short_description=p3@Chl1 | |||
}} |
Revision as of 20:52, 4 August 2015
Short description: | p3@Chl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Chl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1203 |
Association with transcript: | -95bp_to_uc009dcl.1_5end |
EntrezGene: | 12661 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.01e-17 | 33 |
neuronal stem cell | 6.01e-17 | 33 |
neuroblast | 6.01e-17 | 33 |
electrically signaling cell | 6.01e-17 | 33 |
neural cell | 2.85e-16 | 43 |
ectodermal cell | 1.48e-15 | 44 |
neurectodermal cell | 1.48e-15 | 44 |
electrically responsive cell | 2.37e-12 | 39 |
electrically active cell | 2.37e-12 | 39 |
CNS neuron (sensu Vertebrata) | 4.43e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.43e-10 | 23 |
autonomic neuron | 2.93e-08 | 9 |