FFCP PHASE1:Mm9::chr6:128074330..128074341,-: Difference between revisions
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{{FFCP|EntrezGene=109246|HGNC=|MCL_coexpression_id=147|UniProt=D3YU98|association_with_transcript=0bp_to_ENSMUST00000127105_5end|description=CAGE_peak_6_at_Tspan9_5end|id=chr6:128074330..128074341,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,1.78e-07,1;CL:0002078,1.78e-07,1;CL:0000115,1.78e-07,1;CL:0002262,1.78e-07,1;CL:1000398,1.78e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!4.36e-10!33;UBERON:0000464!3.09e-09!57;UBERON:0000926!6.69e-08!193;UBERON:0004120!6.69e-08!193;UBERON:0006603!6.69e-08!193;UBERON:0002048!1.01e-07!14;UBERON:0000117!1.01e-07!14;UBERON:0000171!1.01e-07!14;UBERON:0000170!1.01e-07!14;UBERON:0005597!1.01e-07!14;UBERON:0000118!1.01e-07!14;UBERON:0005157!1.29e-07!27;UBERON:0005177!2.13e-07!85;UBERON:0009569!8.73e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.34e-28,14;UBERON:0000117,1.34e-28,14;UBERON:0000171,1.34e-28,14;UBERON:0000170,1.34e-28,14;UBERON:0005597,1.34e-28,14;UBERON:0000118,1.34e-28,14;UBERON:0005153,1.92e-23,17;UBERON:0005178,1.92e-23,17;UBERON:0005181,1.92e-23,17;UBERON:0002224,1.92e-23,17;UBERON:0000915,1.92e-23,17;UBERON:0008947,1.92e-23,17;UBERON:0003258,1.92e-23,17;UBERON:0005157,7.90e-20,20;UBERON:0009569,1.63e-10,66;UBERON:0005177,2.79e-10,79;UBERON:0000065,2.74e-09,41;UBERON:0001004,4.77e-09,42;UBERON:0002100,7.51e-09,90;UBERON:0002394,1.78e-07,1;UBERON:0001281,1.78e-07,1;UBERON:0000353,1.78e-07,1;UBERON:0003497,1.78e-07,1;UBERON:0003909,1.78e-07,1;UBERON:0003928,1.78e-07,1;UBERON:0003835,1.78e-07,1;UBERON:0003513,1.78e-07,1;UBERON:0001280,1.78e-07,1;UBERON:0004647,1.78e-07,1;UBERON:0002294,1.78e-07,1;UBERON:0001173,1.78e-07,1;UBERON:0004912,1.78e-07,1;UBERON:0005171,1.78e-07,1;UBERON:0001041,7.13e-07,80|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0.742210695324124,0.173485326766136,0.608930956624282,0.691846491768175,0.301445281105245,0.470354828542819,0.125666591329675,0.247194967734374,0.578397427679647,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0.136072998302656,0,0.187403449119458,0,0.215567992932842,0,0,0,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.828503090142008,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.700592054203017,0.329119699826961,0.164167464079095,0.324275238183423,0.292399974850665,0.658650345873152,0.268412837520744,0.210289948564127,0.102904612379284,0,0.528901133327089,0,0,0,0.80673409849337,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0.758838445491087,0.590440591918409,0.784993639206874,1.35736880313981,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,5.35784251483154,0,0,0,0.469380496577004,0.167506257441816,1.19021820443007,0.975668239288994,1.7339865851681,1.10732344824387,1.11618338060241,4.42430949732493,3.10832967358612,3.7608755231193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,0.712994756769443,0.316036757935816,0,1.03135543248187,0,0,0.129358683782755,1.07168517515796,0.354680467284547,0.178368817602071,0.987294123612726,0.913394847343798,0.469343416127421,0.21183207086382,0,0,0,0,0,0,0,0,0,1.23832120777933,0.925972636848558,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0.496375471371293,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0,0.241584120826006,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.665957860122194,0,0.167884616364078,0.579568782096571,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.229741875822453,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p6@Tspan9}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:109246 | |||
|HGNC= | |||
|MCL_coexpression_id=147 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YU98 | |||
|association_with_transcript=0bp_to_ENSMUST00000127105_5end | |||
|cluster_id=chr6:128074330..128074341,- | |||
|description=CAGE_peak_6_at_Tspan9_5end | |||
|id=chr6:128074330..128074341,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.78e-07,1;CL:0002078,1.78e-07,1;CL:0000115,1.78e-07,1;CL:0002262,1.78e-07,1;CL:1000398,1.78e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!4.36e-10!33;UBERON:0000464!3.09e-09!57;UBERON:0000926!6.69e-08!193;UBERON:0004120!6.69e-08!193;UBERON:0006603!6.69e-08!193;UBERON:0002048!1.01e-07!14;UBERON:0000117!1.01e-07!14;UBERON:0000171!1.01e-07!14;UBERON:0000170!1.01e-07!14;UBERON:0005597!1.01e-07!14;UBERON:0000118!1.01e-07!14;UBERON:0005157!1.29e-07!27;UBERON:0005177!2.13e-07!85;UBERON:0009569!8.73e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.34e-28,14;UBERON:0000117,1.34e-28,14;UBERON:0000171,1.34e-28,14;UBERON:0000170,1.34e-28,14;UBERON:0005597,1.34e-28,14;UBERON:0000118,1.34e-28,14;UBERON:0005153,1.92e-23,17;UBERON:0005178,1.92e-23,17;UBERON:0005181,1.92e-23,17;UBERON:0002224,1.92e-23,17;UBERON:0000915,1.92e-23,17;UBERON:0008947,1.92e-23,17;UBERON:0003258,1.92e-23,17;UBERON:0005157,7.90e-20,20;UBERON:0009569,1.63e-10,66;UBERON:0005177,2.79e-10,79;UBERON:0000065,2.74e-09,41;UBERON:0001004,4.77e-09,42;UBERON:0002100,7.51e-09,90;UBERON:0002394,1.78e-07,1;UBERON:0001281,1.78e-07,1;UBERON:0000353,1.78e-07,1;UBERON:0003497,1.78e-07,1;UBERON:0003909,1.78e-07,1;UBERON:0003928,1.78e-07,1;UBERON:0003835,1.78e-07,1;UBERON:0003513,1.78e-07,1;UBERON:0001280,1.78e-07,1;UBERON:0004647,1.78e-07,1;UBERON:0002294,1.78e-07,1;UBERON:0001173,1.78e-07,1;UBERON:0004912,1.78e-07,1;UBERON:0005171,1.78e-07,1;UBERON:0001041,7.13e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0.742210695324124,0.173485326766136,0.608930956624282,0.691846491768175,0.301445281105245,0.470354828542819,0.125666591329675,0.247194967734374,0.578397427679647,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0.136072998302656,0,0.187403449119458,0,0.215567992932842,0,0,0,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.828503090142008,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.700592054203017,0.329119699826961,0.164167464079095,0.324275238183423,0.292399974850665,0.658650345873152,0.268412837520744,0.210289948564127,0.102904612379284,0,0.528901133327089,0,0,0,0.80673409849337,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0.758838445491087,0.590440591918409,0.784993639206874,1.35736880313981,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,5.35784251483154,0,0,0,0.469380496577004,0.167506257441816,1.19021820443007,0.975668239288994,1.7339865851681,1.10732344824387,1.11618338060241,4.42430949732493,3.10832967358612,3.7608755231193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,0.712994756769443,0.316036757935816,0,1.03135543248187,0,0,0.129358683782755,1.07168517515796,0.354680467284547,0.178368817602071,0.987294123612726,0.913394847343798,0.469343416127421,0.21183207086382,0,0,0,0,0,0,0,0,0,1.23832120777933,0.925972636848558,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0.496375471371293,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0,0.241584120826006,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.665957860122194,0,0.167884616364078,0.579568782096571,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.229741875822453,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p6@Tspan9 | |||
}} |
Revision as of 05:15, 5 August 2015
Short description: | p6@Tspan9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Tspan9_5end |
Coexpression cluster: | MCL_coexpression_mm9:147 |
Association with transcript: | 0bp_to_ENSMUST00000127105_5end |
EntrezGene: | 109246 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.78e-07 | 1 |
meso-epithelial cell | 1.78e-07 | 1 |
endothelial cell | 1.78e-07 | 1 |
endothelial cell of sinusoid | 1.78e-07 | 1 |
endothelial cell of hepatic sinusoid | 1.78e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lung | 1.34e-28 | 14 |
respiratory tube | 1.34e-28 | 14 |
respiration organ | 1.34e-28 | 14 |
pair of lungs | 1.34e-28 | 14 |
lung primordium | 1.34e-28 | 14 |
lung bud | 1.34e-28 | 14 |
epithelial bud | 1.92e-23 | 17 |
thoracic cavity element | 1.92e-23 | 17 |
thoracic segment organ | 1.92e-23 | 17 |
thoracic cavity | 1.92e-23 | 17 |
thoracic segment of trunk | 1.92e-23 | 17 |
respiratory primordium | 1.92e-23 | 17 |
endoderm of foregut | 1.92e-23 | 17 |
epithelial fold | 7.90e-20 | 20 |
subdivision of trunk | 1.63e-10 | 66 |
trunk region element | 2.79e-10 | 79 |
respiratory tract | 2.74e-09 | 41 |
respiratory system | 4.77e-09 | 42 |
trunk | 7.51e-09 | 90 |
bile duct | 1.78e-07 | 1 |
hepatic sinusoid | 1.78e-07 | 1 |
parenchyma | 1.78e-07 | 1 |
abdomen blood vessel | 1.78e-07 | 1 |
sinusoid | 1.78e-07 | 1 |
digestive system duct | 1.78e-07 | 1 |
abdominal segment blood vessel | 1.78e-07 | 1 |
trunk blood vessel | 1.78e-07 | 1 |
liver parenchyma | 1.78e-07 | 1 |
liver lobule | 1.78e-07 | 1 |
biliary system | 1.78e-07 | 1 |
biliary tree | 1.78e-07 | 1 |
biliary bud | 1.78e-07 | 1 |
hepatic duct | 1.78e-07 | 1 |
foregut | 7.13e-07 | 80 |