FFCP PHASE1:Mm9::chr9:108999173..108999176,+: Difference between revisions
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{{FFCP|EntrezGene=235611|HGNC=|MCL_coexpression_id=176|UniProt=D3YUD0|association_with_transcript=-47bp_to_ENSMUST00000130366_5end|description=CAGE_peak_13_at_Plxnb1_5end|id=chr9:108999173..108999176,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002605,1.37e-11,2;CL:0002604,1.37e-11,2;CL:0002453,7.64e-11,8;CL:0000333,1.07e-08,10;CL:0000095,1.07e-08,10;CL:0000243,1.07e-08,10;CL:0000123,1.07e-08,10;CL:0000125,1.07e-08,10;CL:0000030,1.07e-08,10;CL:0000339,1.07e-08,10;CL:0000128,1.75e-08,6;CL:0000126,1.75e-08,6;CL:0000127,1.75e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.77e-15!52;UBERON:0005068!2.77e-15!52;UBERON:0006241!2.77e-15!52;UBERON:0007135!2.77e-15!52;UBERON:0001017!1.91e-14!73;UBERON:0005743!1.91e-14!73;UBERON:0000073!2.83e-14!75;UBERON:0001016!2.83e-14!75;UBERON:0002020!1.16e-13!34;UBERON:0000955!2.07e-13!50;UBERON:0006238!2.07e-13!50;UBERON:0002616!1.30e-12!49;UBERON:0002346!3.39e-12!71;UBERON:0003075!3.39e-12!71;UBERON:0007284!3.39e-12!71;UBERON:0000033!1.92e-11!63;UBERON:0002791!8.85e-11!29;UBERON:0003528!8.85e-11!29;UBERON:0001893!8.85e-11!29;UBERON:0004121!1.43e-10!102;UBERON:0000924!1.43e-10!102;UBERON:0006601!1.43e-10!102;UBERON:0004111!3.33e-09!122;UBERON:0000025!4.11e-09!114;UBERON:0000956!7.17e-09!21;UBERON:0001869!7.17e-09!21;UBERON:0000203!7.17e-09!21;UBERON:0003080!1.21e-08!40;UBERON:0003076!1.23e-08!12;UBERON:0003057!1.23e-08!12;UBERON:0002780!5.20e-08!39;UBERON:0001890!5.20e-08!39;UBERON:0006240!5.20e-08!39;UBERON:0002619!6.55e-08!17;UBERON:0003056!1.08e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000955,1.56e-21,47;UBERON:0006238,1.56e-21,47;UBERON:0001049,4.18e-19,52;UBERON:0005068,4.18e-19,52;UBERON:0006241,4.18e-19,52;UBERON:0007135,4.18e-19,52;UBERON:0002616,5.62e-19,46;UBERON:0001017,2.42e-17,73;UBERON:0001016,8.06e-17,75;UBERON:0000073,7.26e-16,54;UBERON:0002346,4.02e-15,64;UBERON:0003075,4.02e-15,64;UBERON:0007284,4.02e-15,64;UBERON:0000956,4.04e-14,21;UBERON:0001869,4.04e-14,21;UBERON:0000203,4.04e-14,21;UBERON:0002619,1.16e-13,17;UBERON:0004733,1.76e-13,6;UBERON:0004732,1.76e-13,6;UBERON:0002028,1.76e-13,6;UBERON:0007277,1.76e-13,6;UBERON:0010371,5.46e-13,73;UBERON:0004121,8.66e-13,95;UBERON:0000924,8.66e-13,95;UBERON:0006601,8.66e-13,95;UBERON:0003528,1.40e-12,29;UBERON:0002791,1.40e-12,29;UBERON:0001893,1.40e-12,29;UBERON:0002037,7.50e-12,4;UBERON:0002680,7.50e-12,4;UBERON:0001895,7.50e-12,4;UBERON:0010092,7.50e-12,4;UBERON:0006215,7.50e-12,4;UBERON:0001954,9.44e-12,7;UBERON:0003022,9.44e-12,7;UBERON:0002421,9.44e-12,7;UBERON:0000349,9.44e-12,7;UBERON:0002600,9.44e-12,7;UBERON:0002780,3.17e-11,39;UBERON:0001890,3.17e-11,39;UBERON:0006240,3.17e-11,39;UBERON:0003080,6.55e-11,40;UBERON:0002020,1.48e-10,34;UBERON:0003076,4.22e-10,12;UBERON:0003057,4.22e-10,12;UBERON:0010314,7.61e-10,92;UBERON:0000025,8.33e-09,114;UBERON:0003056,1.20e-08,49;UBERON:0004111,4.54e-08,122|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48840250208714,4.39372365468944,4.08302788055995,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898800331555214,4.99483796918021,0,0.135005938331691,0.420649922702764,0.285650984403804,0.662605622854841,0.244981598429908,0,0,0,0.638436690425939,0.768032666281217,0.263772575460388,0.182975287204819,0.52091337055676,1.3959149950069,0,0.45839474333043,0.294628585473668,0.427115042397309,0.186399445825301,0,0.0755715601067855,2.31891590961342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.29688427812965,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0,0,0,1.75668478206928,1.25668024088073,0,0,0,0,0.898743836428936,0,0.125654352112864,1.21677024134594,0.511430914660661,1.45451631191692,0.324482526135515,0.101839363850316,0.124406970610093,0.252722758433675,0.631325567659422,0,0,0.180062129805349,0,0,0,0,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.134206418760372,1.05144974282064,1.54356918568927,0,0,0,0.232236671860439,0,0.201683524623343,0,0.380451252225118,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.637819074629948,0.491589944147214,0.172684981865896,0,0,0,0,0,0.642202359951168,1.40654023910644,0,0,0,0,0.215423397732799,0,0,0,0,0,0,1.92792789853084,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180938774784468,0,0.164140899745061,0.291480836629851,1.11255181206306,0,0.206386867963223,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0,0,0.418176592028937,0.87345025498471,0.269728692769641,0.247960367176008,0.26175594198403,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0.501572104035363,0,0.460325236507177,1.14579102687879,0.171853182343688,0.685082519770642,1.5107877947794,0.675022500231806,1.80128481289688,0.453142408984205,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0,0,0.347652977834566,0,0,0.147198920134397,0,0,0,0,0,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0|short_description=p13@Plxnb1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:235611 | |||
|HGNC= | |||
|MCL_coexpression_id=176 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YUD0 | |||
|association_with_transcript=-47bp_to_ENSMUST00000130366_5end | |||
|cluster_id=chr9:108999173..108999176,+ | |||
|description=CAGE_peak_13_at_Plxnb1_5end | |||
|id=chr9:108999173..108999176,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.37e-11,2;CL:0002604,1.37e-11,2;CL:0002453,7.64e-11,8;CL:0000333,1.07e-08,10;CL:0000095,1.07e-08,10;CL:0000243,1.07e-08,10;CL:0000123,1.07e-08,10;CL:0000125,1.07e-08,10;CL:0000030,1.07e-08,10;CL:0000339,1.07e-08,10;CL:0000128,1.75e-08,6;CL:0000126,1.75e-08,6;CL:0000127,1.75e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.77e-15!52;UBERON:0005068!2.77e-15!52;UBERON:0006241!2.77e-15!52;UBERON:0007135!2.77e-15!52;UBERON:0001017!1.91e-14!73;UBERON:0005743!1.91e-14!73;UBERON:0000073!2.83e-14!75;UBERON:0001016!2.83e-14!75;UBERON:0002020!1.16e-13!34;UBERON:0000955!2.07e-13!50;UBERON:0006238!2.07e-13!50;UBERON:0002616!1.30e-12!49;UBERON:0002346!3.39e-12!71;UBERON:0003075!3.39e-12!71;UBERON:0007284!3.39e-12!71;UBERON:0000033!1.92e-11!63;UBERON:0002791!8.85e-11!29;UBERON:0003528!8.85e-11!29;UBERON:0001893!8.85e-11!29;UBERON:0004121!1.43e-10!102;UBERON:0000924!1.43e-10!102;UBERON:0006601!1.43e-10!102;UBERON:0004111!3.33e-09!122;UBERON:0000025!4.11e-09!114;UBERON:0000956!7.17e-09!21;UBERON:0001869!7.17e-09!21;UBERON:0000203!7.17e-09!21;UBERON:0003080!1.21e-08!40;UBERON:0003076!1.23e-08!12;UBERON:0003057!1.23e-08!12;UBERON:0002780!5.20e-08!39;UBERON:0001890!5.20e-08!39;UBERON:0006240!5.20e-08!39;UBERON:0002619!6.55e-08!17;UBERON:0003056!1.08e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,1.56e-21,47;UBERON:0006238,1.56e-21,47;UBERON:0001049,4.18e-19,52;UBERON:0005068,4.18e-19,52;UBERON:0006241,4.18e-19,52;UBERON:0007135,4.18e-19,52;UBERON:0002616,5.62e-19,46;UBERON:0001017,2.42e-17,73;UBERON:0001016,8.06e-17,75;UBERON:0000073,7.26e-16,54;UBERON:0002346,4.02e-15,64;UBERON:0003075,4.02e-15,64;UBERON:0007284,4.02e-15,64;UBERON:0000956,4.04e-14,21;UBERON:0001869,4.04e-14,21;UBERON:0000203,4.04e-14,21;UBERON:0002619,1.16e-13,17;UBERON:0004733,1.76e-13,6;UBERON:0004732,1.76e-13,6;UBERON:0002028,1.76e-13,6;UBERON:0007277,1.76e-13,6;UBERON:0010371,5.46e-13,73;UBERON:0004121,8.66e-13,95;UBERON:0000924,8.66e-13,95;UBERON:0006601,8.66e-13,95;UBERON:0003528,1.40e-12,29;UBERON:0002791,1.40e-12,29;UBERON:0001893,1.40e-12,29;UBERON:0002037,7.50e-12,4;UBERON:0002680,7.50e-12,4;UBERON:0001895,7.50e-12,4;UBERON:0010092,7.50e-12,4;UBERON:0006215,7.50e-12,4;UBERON:0001954,9.44e-12,7;UBERON:0003022,9.44e-12,7;UBERON:0002421,9.44e-12,7;UBERON:0000349,9.44e-12,7;UBERON:0002600,9.44e-12,7;UBERON:0002780,3.17e-11,39;UBERON:0001890,3.17e-11,39;UBERON:0006240,3.17e-11,39;UBERON:0003080,6.55e-11,40;UBERON:0002020,1.48e-10,34;UBERON:0003076,4.22e-10,12;UBERON:0003057,4.22e-10,12;UBERON:0010314,7.61e-10,92;UBERON:0000025,8.33e-09,114;UBERON:0003056,1.20e-08,49;UBERON:0004111,4.54e-08,122 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48840250208714,4.39372365468944,4.08302788055995,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898800331555214,4.99483796918021,0,0.135005938331691,0.420649922702764,0.285650984403804,0.662605622854841,0.244981598429908,0,0,0,0.638436690425939,0.768032666281217,0.263772575460388,0.182975287204819,0.52091337055676,1.3959149950069,0,0.45839474333043,0.294628585473668,0.427115042397309,0.186399445825301,0,0.0755715601067855,2.31891590961342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.29688427812965,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0,0,0,1.75668478206928,1.25668024088073,0,0,0,0,0.898743836428936,0,0.125654352112864,1.21677024134594,0.511430914660661,1.45451631191692,0.324482526135515,0.101839363850316,0.124406970610093,0.252722758433675,0.631325567659422,0,0,0.180062129805349,0,0,0,0,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.134206418760372,1.05144974282064,1.54356918568927,0,0,0,0.232236671860439,0,0.201683524623343,0,0.380451252225118,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.637819074629948,0.491589944147214,0.172684981865896,0,0,0,0,0,0.642202359951168,1.40654023910644,0,0,0,0,0.215423397732799,0,0,0,0,0,0,1.92792789853084,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180938774784468,0,0.164140899745061,0.291480836629851,1.11255181206306,0,0.206386867963223,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0,0,0.418176592028937,0.87345025498471,0.269728692769641,0.247960367176008,0.26175594198403,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0.501572104035363,0,0.460325236507177,1.14579102687879,0.171853182343688,0.685082519770642,1.5107877947794,0.675022500231806,1.80128481289688,0.453142408984205,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0,0,0.347652977834566,0,0,0.147198920134397,0,0,0,0,0,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p13@Plxnb1 | |||
}} |
Revision as of 14:26, 4 August 2015
Short description: | p13@Plxnb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Plxnb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | -47bp_to_ENSMUST00000130366_5end |
EntrezGene: | 235611 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.37e-11 | 2 |
astrocyte of the hippocampus | 1.37e-11 | 2 |
oligodendrocyte precursor cell | 7.64e-11 | 8 |
migratory neural crest cell | 1.07e-08 | 10 |
neuron associated cell | 1.07e-08 | 10 |
glial cell (sensu Vertebrata) | 1.07e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 1.07e-08 | 10 |
glial cell | 1.07e-08 | 10 |
glioblast | 1.07e-08 | 10 |
glioblast (sensu Vertebrata) | 1.07e-08 | 10 |
oligodendrocyte | 1.75e-08 | 6 |
macroglial cell | 1.75e-08 | 6 |
astrocyte | 1.75e-08 | 6 |