FFCP PHASE1:Mm9::chr9:95307722..95307752,-: Difference between revisions
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{{FFCP|EntrezGene=54371|HGNC=|MCL_coexpression_id=23|UniProt=Q80WV3|association_with_transcript=-33bp_to_ENSMUST00000036267,NM_018763,uc009raz.2_5end|description=CAGE_peak_2_at_Chst2_5end|id=chr9:95307722..95307752,-|ontology_enrichment_celltype=CL:0000221!3.27e-09!44;CL:0000133!3.27e-09!44;CL:0002319!9.91e-09!43;CL:0000117!1.23e-08!23;CL:0000337!1.23e-08!23;CL:0000055!6.03e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,7.66e-09,23;CL:0000337,7.66e-09,23;CL:0000221,1.08e-08,44;CL:0000133,1.08e-08,44;CL:0002319,3.27e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.79e-18!75;UBERON:0001016!4.79e-18!75;UBERON:0001017!6.53e-18!73;UBERON:0005743!6.53e-18!73;UBERON:0001049!7.14e-17!52;UBERON:0005068!7.14e-17!52;UBERON:0006241!7.14e-17!52;UBERON:0007135!7.14e-17!52;UBERON:0002346!1.21e-15!71;UBERON:0003075!1.21e-15!71;UBERON:0007284!1.21e-15!71;UBERON:0000955!2.43e-15!50;UBERON:0006238!2.43e-15!50;UBERON:0002616!5.10e-15!49;UBERON:0004121!5.53e-15!102;UBERON:0000924!5.53e-15!102;UBERON:0006601!5.53e-15!102;UBERON:0002020!3.49e-13!34;UBERON:0000033!1.15e-12!63;UBERON:0003080!1.74e-11!40;UBERON:0002780!4.28e-11!39;UBERON:0001890!4.28e-11!39;UBERON:0006240!4.28e-11!39;UBERON:0002791!1.40e-10!29;UBERON:0003528!1.40e-10!29;UBERON:0001893!1.40e-10!29;UBERON:0000153!5.13e-10!94;UBERON:0000475!6.62e-10!200;UBERON:0003056!7.29e-10!49;UBERON:0001264!2.20e-09!12;UBERON:0003922!2.20e-09!12;UBERON:0002114!2.20e-09!12;UBERON:0003923!2.20e-09!12;UBERON:0003924!2.20e-09!12;UBERON:0003921!2.20e-09!12;UBERON:0007811!7.58e-09!86;UBERON:0001045!1.29e-08!13;UBERON:0000956!3.26e-07!21;UBERON:0001869!3.26e-07!21;UBERON:0000203!3.26e-07!21;UBERON:0002619!5.75e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.34e-18,54;UBERON:0001016,1.21e-17,75;UBERON:0001017,1.68e-17,73;UBERON:0001049,2.58e-17,52;UBERON:0005068,2.58e-17,52;UBERON:0006241,2.58e-17,52;UBERON:0007135,2.58e-17,52;UBERON:0000955,1.69e-14,47;UBERON:0006238,1.69e-14,47;UBERON:0002616,3.58e-14,46;UBERON:0002346,1.42e-13,64;UBERON:0003075,1.42e-13,64;UBERON:0007284,1.42e-13,64;UBERON:0002020,1.61e-13,34;UBERON:0004121,3.25e-12,95;UBERON:0000924,3.25e-12,95;UBERON:0006601,3.25e-12,95;UBERON:0003080,9.02e-12,40;UBERON:0002780,2.27e-11,39;UBERON:0001890,2.27e-11,39;UBERON:0006240,2.27e-11,39;UBERON:0010371,6.71e-11,73;UBERON:0003528,7.68e-11,29;UBERON:0002791,7.68e-11,29;UBERON:0001893,7.68e-11,29;UBERON:0003056,4.20e-10,49;UBERON:0001264,1.31e-09,12;UBERON:0000956,2.23e-07,21;UBERON:0001869,2.23e-07,21;UBERON:0000203,2.23e-07,21;UBERON:0010314,3.40e-07,92;UBERON:0002619,4.00e-07,17|phase1_expression=6.08565618998217,0,0,0,0.500895729946347,0,0,2.1950964985068,7.03943610758334,33.0030982114011,15.4096171402954,21.3789386107502,0,0.699363219351979,0.666219523631325,0.202475267389826,0,0.157731082679119,0.274228867211478,0,5.52781385981954,0.0992909512008853,0,0.319984845586813,0.68822784320151,0,0,0,0,0.252030129759931,0,0,0,0,0.577703239502549,0.664938581433969,0.204169356262369,0,0,0,0,0,0,1.76255545165808,1.4192770370732,1.10128051297009,12.5182615095686,16.7879370412944,26.1426557454021,21.970578595394,17.778275546421,37.3756667348926,0,2.90144856804538,0.672187598284928,0.771778308107841,0.85960031981627,1.03134418455488,8.6996078169627,10.5798195854407,12.0427966666174,5.08266798103698,6.22506357277798,1.7997994345628,1.97773272513395,2.1314403448383,25.7656095045828,37.2691756161908,3.00699875694585,4.45519596494579,3.57552434297349,23.4233807211119,17.0068776532742,3.42974237801871,3.35459148563827,10.1114066527102,6.60695285996332,11.1087984134113,11.981309593987,15.1669230889723,17.0167017100482,17.7110545989298,12.5632349550621,5.06486349028512,8.70950012327818,14.7314292736834,12.5287079103211,12.6751623161204,2.80186915332781,5.59229544790213,5.50742528533188,6.0229671388697,0,0.539703191637817,0,0,3.5111105032938,4.94247935476367,5.19572009205738,3.18005617059306,20.4222958676187,3.84979432242953,2.54805239706646,21.3320010945999,0,0,0,1.7127581957859,0.258937883647172,6.08612770165782,3.46970653532272,6.08930956624282,8.07154240396205,9.3448037142626,5.64425794251383,11.3099932196708,1.73036477414062,0.144599356919912,2.65383165584962,1.13236794963186,2.20841518460394,2.90925151881133,1.86391761218122,5.27005434620785,9.00620839297857,6.13096932500619,0,0,0,9.58660092190865,13.2675174817402,10.5549655774806,9.38651329038293,8.18289463457058,12.259494629014,10.707923362472,2.03678727700633,2.36373244159177,0,1.26265113531884,4.29397461776922,3.21862946206862,3.96136685571768,1.9591626318643,1.7009124787832,1.2811372028485,1.49922759295566,3.88055056108524,4.52692785158969,8.50977360755187,7.9178005873777,6.35667624039967,5.83899223373756,6.61679116392116,4.52720700097476,3.78165106955137,0,0,0,0.828503090142008,0.234526059981096,1.08037236876609,1.42046841351126,0.590292695242212,0.925602677324269,0.697601834251224,0.536546802799238,0.583826711835847,0.16455984991348,0.492502392237286,0.4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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:54371 | |||
|HGNC= | |||
|MCL_coexpression_id=23 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80WV3 | |||
|association_with_transcript=-33bp_to_ENSMUST00000036267,NM_018763,uc009raz.2_5end | |||
|cluster_id=chr9:95307722..95307752,- | |||
|description=CAGE_peak_2_at_Chst2_5end | |||
|id=chr9:95307722..95307752,- | |||
|ontology_enrichment_celltype=CL:0000221!3.27e-09!44;CL:0000133!3.27e-09!44;CL:0002319!9.91e-09!43;CL:0000117!1.23e-08!23;CL:0000337!1.23e-08!23;CL:0000055!6.03e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.66e-09,23;CL:0000337,7.66e-09,23;CL:0000221,1.08e-08,44;CL:0000133,1.08e-08,44;CL:0002319,3.27e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.79e-18!75;UBERON:0001016!4.79e-18!75;UBERON:0001017!6.53e-18!73;UBERON:0005743!6.53e-18!73;UBERON:0001049!7.14e-17!52;UBERON:0005068!7.14e-17!52;UBERON:0006241!7.14e-17!52;UBERON:0007135!7.14e-17!52;UBERON:0002346!1.21e-15!71;UBERON:0003075!1.21e-15!71;UBERON:0007284!1.21e-15!71;UBERON:0000955!2.43e-15!50;UBERON:0006238!2.43e-15!50;UBERON:0002616!5.10e-15!49;UBERON:0004121!5.53e-15!102;UBERON:0000924!5.53e-15!102;UBERON:0006601!5.53e-15!102;UBERON:0002020!3.49e-13!34;UBERON:0000033!1.15e-12!63;UBERON:0003080!1.74e-11!40;UBERON:0002780!4.28e-11!39;UBERON:0001890!4.28e-11!39;UBERON:0006240!4.28e-11!39;UBERON:0002791!1.40e-10!29;UBERON:0003528!1.40e-10!29;UBERON:0001893!1.40e-10!29;UBERON:0000153!5.13e-10!94;UBERON:0000475!6.62e-10!200;UBERON:0003056!7.29e-10!49;UBERON:0001264!2.20e-09!12;UBERON:0003922!2.20e-09!12;UBERON:0002114!2.20e-09!12;UBERON:0003923!2.20e-09!12;UBERON:0003924!2.20e-09!12;UBERON:0003921!2.20e-09!12;UBERON:0007811!7.58e-09!86;UBERON:0001045!1.29e-08!13;UBERON:0000956!3.26e-07!21;UBERON:0001869!3.26e-07!21;UBERON:0000203!3.26e-07!21;UBERON:0002619!5.75e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.34e-18,54;UBERON:0001016,1.21e-17,75;UBERON:0001017,1.68e-17,73;UBERON:0001049,2.58e-17,52;UBERON:0005068,2.58e-17,52;UBERON:0006241,2.58e-17,52;UBERON:0007135,2.58e-17,52;UBERON:0000955,1.69e-14,47;UBERON:0006238,1.69e-14,47;UBERON:0002616,3.58e-14,46;UBERON:0002346,1.42e-13,64;UBERON:0003075,1.42e-13,64;UBERON:0007284,1.42e-13,64;UBERON:0002020,1.61e-13,34;UBERON:0004121,3.25e-12,95;UBERON:0000924,3.25e-12,95;UBERON:0006601,3.25e-12,95;UBERON:0003080,9.02e-12,40;UBERON:0002780,2.27e-11,39;UBERON:0001890,2.27e-11,39;UBERON:0006240,2.27e-11,39;UBERON:0010371,6.71e-11,73;UBERON:0003528,7.68e-11,29;UBERON:0002791,7.68e-11,29;UBERON:0001893,7.68e-11,29;UBERON:0003056,4.20e-10,49;UBERON:0001264,1.31e-09,12;UBERON:0000956,2.23e-07,21;UBERON:0001869,2.23e-07,21;UBERON:0000203,2.23e-07,21;UBERON:0010314,3.40e-07,92;UBERON:0002619,4.00e-07,17 | |||
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| |||
|short_description=p2@Chst2 | |||
}} |
Revision as of 19:07, 5 August 2015
Short description: | p2@Chst2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Chst2_5end |
Coexpression cluster: | MCL_coexpression_mm9:23 |
Association with transcript: | -33bp_to_ENSMUST00000036267, NM_018763, uc009raz.2_5end |
EntrezGene: | 54371 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.66e-09 | 23 |
neuroblast (sensu Vertebrata) | 7.66e-09 | 23 |
ectodermal cell | 1.08e-08 | 44 |
neurectodermal cell | 1.08e-08 | 44 |
neural cell | 3.27e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.34e-18 | 54 |
nervous system | 1.21e-17 | 75 |
central nervous system | 1.68e-17 | 73 |
neural tube | 2.58e-17 | 52 |
neural rod | 2.58e-17 | 52 |
future spinal cord | 2.58e-17 | 52 |
neural keel | 2.58e-17 | 52 |
brain | 1.69e-14 | 47 |
future brain | 1.69e-14 | 47 |
regional part of brain | 3.58e-14 | 46 |
neurectoderm | 1.42e-13 | 64 |
neural plate | 1.42e-13 | 64 |
presumptive neural plate | 1.42e-13 | 64 |
gray matter | 1.61e-13 | 34 |
ectoderm-derived structure | 3.25e-12 | 95 |
ectoderm | 3.25e-12 | 95 |
presumptive ectoderm | 3.25e-12 | 95 |
anterior neural tube | 9.02e-12 | 40 |
regional part of forebrain | 2.27e-11 | 39 |
forebrain | 2.27e-11 | 39 |
future forebrain | 2.27e-11 | 39 |
ecto-epithelium | 6.71e-11 | 73 |
brain grey matter | 7.68e-11 | 29 |
regional part of telencephalon | 7.68e-11 | 29 |
telencephalon | 7.68e-11 | 29 |
pre-chordal neural plate | 4.20e-10 | 49 |
pancreas | 1.31e-09 | 12 |
cerebral cortex | 2.23e-07 | 21 |
cerebral hemisphere | 2.23e-07 | 21 |
pallium | 2.23e-07 | 21 |
structure with developmental contribution from neural crest | 3.40e-07 | 92 |
regional part of cerebral cortex | 4.00e-07 | 17 |