FFCP PHASE1:Mm9::chr8:47379946..47379955,-: Difference between revisions
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|id=chr8:47379946..47379955,- | |id=chr8:47379946..47379955,- | ||
|ontology_enrichment_celltype=CL:0002609!8.15e-23!6;CL:0002608!1.90e-17!3;CL:0000117!6.11e-11!23;CL:0000337!6.11e-11!23;CL:0000120!5.01e-08!3;CL:0000540!2.09e-07!33;CL:0000047!2.09e-07!33;CL:0000031!2.09e-07!33;CL:0000404!2.09e-07!33 | |ontology_enrichment_celltype=CL:0002609!8.15e-23!6;CL:0002608!1.90e-17!3;CL:0000117!6.11e-11!23;CL:0000337!6.11e-11!23;CL:0000120!5.01e-08!3;CL:0000540!2.09e-07!33;CL:0000047!2.09e-07!33;CL:0000031!2.09e-07!33;CL:0000404!2.09e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0002608,1.33e-65,3;CL:0002609,2.03e-33,6;CL:0000117,1.91e-09,23;CL:0000337,1.91e-09,23;CL:0000540,7.84e-07,33;CL:0000047,7.84e-07,33;CL:0000031,7.84e-07,33;CL:0000404,7.84e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001954!9.21e-08!7;UBERON:0003022!9.21e-08!7;UBERON:0002421!9.21e-08!7;UBERON:0000349!9.21e-08!7;UBERON:0002600!9.21e-08!7 | |ontology_enrichment_uberon=UBERON:0001954!9.21e-08!7;UBERON:0003022!9.21e-08!7;UBERON:0002421!9.21e-08!7;UBERON:0000349!9.21e-08!7;UBERON:0002600!9.21e-08!7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,8.27e-29,7;UBERON:0003022,8.27e-29,7;UBERON:0002421,8.27e-29,7;UBERON:0000349,8.27e-29,7;UBERON:0002600,8.27e-29,7;UBERON:0003528,7.80e-13,29;UBERON:0002791,7.80e-13,29;UBERON:0001893,7.80e-13,29;UBERON:0002619,1.84e-12,17;UBERON:0002020,4.50e-11,34;UBERON:0000956,2.91e-10,21;UBERON:0001869,2.91e-10,21;UBERON:0000203,2.91e-10,21;UBERON:0002780,9.26e-10,39;UBERON:0001890,9.26e-10,39;UBERON:0006240,9.26e-10,39;UBERON:0003080,1.55e-09,40;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0003056,6.29e-08,49;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.405017814995072,0,0,0,5.63457676388789,5.46319184803947,2.75765635983006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13088916901578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.486213434136588,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.405017814995072,0,0,0,5.63457676388789,5.46319184803947,2.75765635983006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13088916901578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.486213434136588,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p1@Helt | |short_description=p1@Helt | ||
}} | }} |
Revision as of 13:28, 13 November 2012
Short description: | p1@Helt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Helt_5end |
Coexpression cluster: | MCL_coexpression_mm9:184 |
Association with transcript: | 69bp_to_ENSMUST00000058636, NM_173789, uc009lqb.1, uc009lqd.1_5end |
EntrezGene: | Helt |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 1.33e-65 | 3 |
neuron of cerebral cortex | 2.03e-33 | 6 |
CNS neuron (sensu Vertebrata) | 1.91e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.91e-09 | 23 |
neuron | 7.84e-07 | 33 |
neuronal stem cell | 7.84e-07 | 33 |
neuroblast | 7.84e-07 | 33 |
electrically signaling cell | 7.84e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 8.27e-29 | 7 |
lobe parts of cerebral cortex | 8.27e-29 | 7 |
hippocampal formation | 8.27e-29 | 7 |
limbic system | 8.27e-29 | 7 |
limbic lobe | 8.27e-29 | 7 |
brain grey matter | 7.80e-13 | 29 |
regional part of telencephalon | 7.80e-13 | 29 |
telencephalon | 7.80e-13 | 29 |
regional part of cerebral cortex | 1.84e-12 | 17 |
gray matter | 4.50e-11 | 34 |
cerebral cortex | 2.91e-10 | 21 |
cerebral hemisphere | 2.91e-10 | 21 |
pallium | 2.91e-10 | 21 |
regional part of forebrain | 9.26e-10 | 39 |
forebrain | 9.26e-10 | 39 |
future forebrain | 9.26e-10 | 39 |
anterior neural tube | 1.55e-09 | 40 |
regional part of brain | 2.15e-08 | 46 |
brain | 3.12e-08 | 47 |
future brain | 3.12e-08 | 47 |
pre-chordal neural plate | 6.29e-08 | 49 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |
regional part of nervous system | 2.91e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.