FFCP PHASE1:Mm9::chr16:8667503..8667508,-: Difference between revisions
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|id=chr16:8667503..8667508,- | |id=chr16:8667503..8667508,- | ||
|ontology_enrichment_celltype=CL:0000355!9.84e-13!9;CL:0000181!1.76e-08!5;CL:0000417!1.76e-08!5;CL:0000668!1.76e-08!5;CL:0000412!1.76e-08!5;CL:0000182!1.76e-08!5;CL:0000222!2.44e-08!7;CL:0000192!3.21e-07!3;CL:0000359!3.21e-07!3;CL:0002539!3.21e-07!3;CL:0000514!3.21e-07!3 | |ontology_enrichment_celltype=CL:0000355!9.84e-13!9;CL:0000181!1.76e-08!5;CL:0000417!1.76e-08!5;CL:0000668!1.76e-08!5;CL:0000412!1.76e-08!5;CL:0000182!1.76e-08!5;CL:0000222!2.44e-08!7;CL:0000192!3.21e-07!3;CL:0000359!3.21e-07!3;CL:0002539!3.21e-07!3;CL:0000514!3.21e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000213,3.74e-10,1;CL:0002078,3.74e-10,1;CL:0000115,3.74e-10,1;CL:0002262,3.74e-10,1;CL:1000398,3.74e-10,1;CL:0000057,8.42e-10,1;CL:0000632,8.42e-10,1;CL:0000355,1.79e-09,9 | |||
|ontology_enrichment_disease=DOID:0060100!6.04e-09!3;DOID:4045!6.04e-09!3 | |ontology_enrichment_disease=DOID:0060100!6.04e-09!3;DOID:4045!6.04e-09!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.66e-27,3;DOID:4045,4.66e-27,3;DOID:0050686,6.75e-14,6 | |||
|ontology_enrichment_uberon=UBERON:0001134!9.84e-13!9;UBERON:0002036!9.84e-13!9;UBERON:0002385!9.84e-13!9;UBERON:0000486!9.84e-13!9;UBERON:0001015!9.84e-13!9;UBERON:0004290!9.84e-13!9;UBERON:0003082!9.84e-13!9;UBERON:0000383!2.36e-11!10;UBERON:0002329!3.18e-10!11;UBERON:0003077!3.18e-10!11;UBERON:0003059!3.18e-10!11;UBERON:0007282!3.18e-10!11;UBERON:0009618!3.18e-10!11;UBERON:0007285!3.18e-10!11;UBERON:0005256!1.49e-08!47;UBERON:0000914!3.99e-08!17;UBERON:0000055!1.02e-07!5;UBERON:0001981!1.02e-07!5;UBERON:0002049!1.02e-07!5;UBERON:0007500!1.02e-07!5;UBERON:0007798!1.02e-07!5;UBERON:0004537!1.02e-07!5;UBERON:0006965!1.02e-07!5;UBERON:0001135!3.21e-07!3;UBERON:0004237!3.21e-07!3;UBERON:0004695!3.21e-07!3;UBERON:0002111!3.21e-07!3;UBERON:0004178!3.21e-07!3 | |ontology_enrichment_uberon=UBERON:0001134!9.84e-13!9;UBERON:0002036!9.84e-13!9;UBERON:0002385!9.84e-13!9;UBERON:0000486!9.84e-13!9;UBERON:0001015!9.84e-13!9;UBERON:0004290!9.84e-13!9;UBERON:0003082!9.84e-13!9;UBERON:0000383!2.36e-11!10;UBERON:0002329!3.18e-10!11;UBERON:0003077!3.18e-10!11;UBERON:0003059!3.18e-10!11;UBERON:0007282!3.18e-10!11;UBERON:0009618!3.18e-10!11;UBERON:0007285!3.18e-10!11;UBERON:0005256!1.49e-08!47;UBERON:0000914!3.99e-08!17;UBERON:0000055!1.02e-07!5;UBERON:0001981!1.02e-07!5;UBERON:0002049!1.02e-07!5;UBERON:0007500!1.02e-07!5;UBERON:0007798!1.02e-07!5;UBERON:0004537!1.02e-07!5;UBERON:0006965!1.02e-07!5;UBERON:0001135!3.21e-07!3;UBERON:0004237!3.21e-07!3;UBERON:0004695!3.21e-07!3;UBERON:0002111!3.21e-07!3;UBERON:0004178!3.21e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.74e-10,1;UBERON:0001281,3.74e-10,1;UBERON:0000353,3.74e-10,1;UBERON:0003497,3.74e-10,1;UBERON:0003909,3.74e-10,1;UBERON:0003928,3.74e-10,1;UBERON:0003835,3.74e-10,1;UBERON:0003513,3.74e-10,1;UBERON:0001280,3.74e-10,1;UBERON:0004647,3.74e-10,1;UBERON:0002294,3.74e-10,1;UBERON:0001173,3.74e-10,1;UBERON:0004912,3.74e-10,1;UBERON:0005171,3.74e-10,1;UBERON:0001134,1.79e-09,9;UBERON:0002036,1.79e-09,9;UBERON:0002385,1.79e-09,9;UBERON:0000486,1.79e-09,9;UBERON:0007503,1.79e-09,9;UBERON:0001015,1.79e-09,9;UBERON:0002329,1.79e-09,9;UBERON:0003082,1.79e-09,9;UBERON:0003059,1.79e-09,9;UBERON:0007282,1.79e-09,9;UBERON:0004290,1.79e-09,9;UBERON:0009618,1.79e-09,9;UBERON:0000383,1.39e-08,10;UBERON:0007524,7.44e-08,11;UBERON:0003077,7.44e-08,11;UBERON:0007285,7.44e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45881856213434,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,5.02237956884289,7.0320181007142,2.09409497589519,27.0586484494267,9.56263678941824,4.36959317728038,0.125896817975577,0.405507724878058,0.183546752161682,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92769630792852,1.72084775396277,0.679971333707751,0.539703191637817,0,0.448026887097336,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0.54390568381871,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0.283076530788832,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38215763210514,0,0,0,0,0,0,0,0,0,1.44015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45881856213434,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,5.02237956884289,7.0320181007142,2.09409497589519,27.0586484494267,9.56263678941824,4.36959317728038,0.125896817975577,0.405507724878058,0.183546752161682,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92769630792852,1.72084775396277,0.679971333707751,0.539703191637817,0,0.448026887097336,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0.54390568381871,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0.283076530788832,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38215763210514,0,0,0,0,0,0,0,0,0,1.44015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr16:8667503..8667508,- | |short_description=p@chr16:8667503..8667508,- | ||
}} | }} |
Revision as of 13:32, 13 November 2012
Short description: | p@chr16:8667503..8667508, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:8667503..8667508, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 3.74e-10 | 1 |
meso-epithelial cell | 3.74e-10 | 1 |
endothelial cell | 3.74e-10 | 1 |
endothelial cell of sinusoid | 3.74e-10 | 1 |
endothelial cell of hepatic sinusoid | 3.74e-10 | 1 |
fibroblast | 8.42e-10 | 1 |
hepatic stellate cell | 8.42e-10 | 1 |
multi-potent skeletal muscle stem cell | 1.79e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 3.74e-10 | 1 |
hepatic sinusoid | 3.74e-10 | 1 |
parenchyma | 3.74e-10 | 1 |
abdomen blood vessel | 3.74e-10 | 1 |
sinusoid | 3.74e-10 | 1 |
digestive system duct | 3.74e-10 | 1 |
abdominal segment blood vessel | 3.74e-10 | 1 |
trunk blood vessel | 3.74e-10 | 1 |
liver parenchyma | 3.74e-10 | 1 |
liver lobule | 3.74e-10 | 1 |
biliary system | 3.74e-10 | 1 |
biliary tree | 3.74e-10 | 1 |
biliary bud | 3.74e-10 | 1 |
hepatic duct | 3.74e-10 | 1 |
skeletal muscle tissue | 1.79e-09 | 9 |
striated muscle tissue | 1.79e-09 | 9 |
muscle tissue | 1.79e-09 | 9 |
multilaminar epithelium | 1.79e-09 | 9 |
epithelial vesicle | 1.79e-09 | 9 |
musculature | 1.79e-09 | 9 |
somite | 1.79e-09 | 9 |
myotome | 1.79e-09 | 9 |
presomitic mesoderm | 1.79e-09 | 9 |
presumptive segmental plate | 1.79e-09 | 9 |
dermomyotome | 1.79e-09 | 9 |
trunk paraxial mesoderm | 1.79e-09 | 9 |
musculature of body | 1.39e-08 | 10 |
dense mesenchyme tissue | 7.44e-08 | 11 |
paraxial mesoderm | 7.44e-08 | 11 |
presumptive paraxial mesoderm | 7.44e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.66e-27 | 3 |
muscle cancer | 4.66e-27 | 3 |
organ system cancer | 6.75e-14 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.