FFCP PHASE1:Mm9::chr10:52410302..52410360,+: Difference between revisions
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|id=chr10:52410302..52410360,+ | |id=chr10:52410302..52410360,+ | ||
|ontology_enrichment_celltype=CL:0000221!3.99e-21!44;CL:0000133!3.99e-21!44;CL:0002319!1.16e-20!43;CL:0000540!2.13e-19!33;CL:0000047!2.13e-19!33;CL:0000031!2.13e-19!33;CL:0000404!2.13e-19!33;CL:0000055!7.75e-15!50;CL:0000393!6.28e-14!39;CL:0000211!6.28e-14!39;CL:0000117!3.44e-13!23;CL:0000337!3.44e-13!23;CL:0000107!2.48e-07!9 | |ontology_enrichment_celltype=CL:0000221!3.99e-21!44;CL:0000133!3.99e-21!44;CL:0002319!1.16e-20!43;CL:0000540!2.13e-19!33;CL:0000047!2.13e-19!33;CL:0000031!2.13e-19!33;CL:0000404!2.13e-19!33;CL:0000055!7.75e-15!50;CL:0000393!6.28e-14!39;CL:0000211!6.28e-14!39;CL:0000117!3.44e-13!23;CL:0000337!3.44e-13!23;CL:0000107!2.48e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.13e-21,44;CL:0000133,1.13e-21,44;CL:0002319,3.43e-21,43;CL:0000540,2.80e-20,33;CL:0000047,2.80e-20,33;CL:0000031,2.80e-20,33;CL:0000404,2.80e-20,33;CL:0000393,1.71e-14,39;CL:0000211,1.71e-14,39;CL:0000117,9.19e-14,23;CL:0000337,9.19e-14,23;CL:0000107,1.28e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.37e-35!75;UBERON:0001016!1.37e-35!75;UBERON:0001017!2.93e-35!73;UBERON:0005743!2.93e-35!73;UBERON:0004121!5.49e-34!102;UBERON:0000924!5.49e-34!102;UBERON:0006601!5.49e-34!102;UBERON:0002346!1.64e-26!71;UBERON:0003075!1.64e-26!71;UBERON:0007284!1.64e-26!71;UBERON:0000033!1.86e-23!63;UBERON:0001049!1.33e-22!52;UBERON:0005068!1.33e-22!52;UBERON:0006241!1.33e-22!52;UBERON:0007135!1.33e-22!52;UBERON:0000955!2.80e-21!50;UBERON:0006238!2.80e-21!50;UBERON:0002616!8.37e-21!49;UBERON:0003056!1.55e-20!49;UBERON:0002020!1.28e-18!34;UBERON:0003080!7.09e-18!40;UBERON:0002780!2.51e-17!39;UBERON:0001890!2.51e-17!39;UBERON:0006240!2.51e-17!39;UBERON:0002791!6.91e-16!29;UBERON:0003528!6.91e-16!29;UBERON:0001893!6.91e-16!29;UBERON:0000956!2.26e-11!21;UBERON:0001869!2.26e-11!21;UBERON:0000203!2.26e-11!21;UBERON:0000153!4.10e-11!94;UBERON:0007811!9.59e-11!86;UBERON:0002619!2.16e-09!17;UBERON:0000468!4.26e-09!333;UBERON:0002410!2.48e-07!9;UBERON:0000010!2.76e-07!11 | |ontology_enrichment_uberon=UBERON:0000073!1.37e-35!75;UBERON:0001016!1.37e-35!75;UBERON:0001017!2.93e-35!73;UBERON:0005743!2.93e-35!73;UBERON:0004121!5.49e-34!102;UBERON:0000924!5.49e-34!102;UBERON:0006601!5.49e-34!102;UBERON:0002346!1.64e-26!71;UBERON:0003075!1.64e-26!71;UBERON:0007284!1.64e-26!71;UBERON:0000033!1.86e-23!63;UBERON:0001049!1.33e-22!52;UBERON:0005068!1.33e-22!52;UBERON:0006241!1.33e-22!52;UBERON:0007135!1.33e-22!52;UBERON:0000955!2.80e-21!50;UBERON:0006238!2.80e-21!50;UBERON:0002616!8.37e-21!49;UBERON:0003056!1.55e-20!49;UBERON:0002020!1.28e-18!34;UBERON:0003080!7.09e-18!40;UBERON:0002780!2.51e-17!39;UBERON:0001890!2.51e-17!39;UBERON:0006240!2.51e-17!39;UBERON:0002791!6.91e-16!29;UBERON:0003528!6.91e-16!29;UBERON:0001893!6.91e-16!29;UBERON:0000956!2.26e-11!21;UBERON:0001869!2.26e-11!21;UBERON:0000203!2.26e-11!21;UBERON:0000153!4.10e-11!94;UBERON:0007811!9.59e-11!86;UBERON:0002619!2.16e-09!17;UBERON:0000468!4.26e-09!333;UBERON:0002410!2.48e-07!9;UBERON:0000010!2.76e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.80e-37,75;UBERON:0001017,1.74e-36,73;UBERON:0004121,4.96e-36,95;UBERON:0000924,4.96e-36,95;UBERON:0006601,4.96e-36,95;UBERON:0002346,1.38e-28,64;UBERON:0003075,1.38e-28,64;UBERON:0007284,1.38e-28,64;UBERON:0010371,1.55e-26,73;UBERON:0000073,2.11e-24,54;UBERON:0001049,3.07e-23,52;UBERON:0005068,3.07e-23,52;UBERON:0006241,3.07e-23,52;UBERON:0007135,3.07e-23,52;UBERON:0010314,3.37e-23,92;UBERON:0003056,1.79e-21,49;UBERON:0000955,3.41e-20,47;UBERON:0006238,3.41e-20,47;UBERON:0002616,1.05e-19,46;UBERON:0002020,1.84e-19,34;UBERON:0003080,1.11e-18,40;UBERON:0002780,4.19e-18,39;UBERON:0001890,4.19e-18,39;UBERON:0006240,4.19e-18,39;UBERON:0003528,1.36e-16,29;UBERON:0002791,1.36e-16,29;UBERON:0001893,1.36e-16,29;UBERON:0000956,7.44e-12,21;UBERON:0001869,7.44e-12,21;UBERON:0000203,7.44e-12,21;UBERON:0002619,8.87e-10,17;UBERON:0002410,1.28e-07,9;UBERON:0000010,1.44e-07,11 | |||
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| ||
|short_description=p1@Slc35f1 | |short_description=p1@Slc35f1 | ||
}} | }} |
Revision as of 21:53, 13 November 2012
Short description: | p1@Slc35f1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc35f1_5end |
Coexpression cluster: | MCL_coexpression_mm9:593 |
Association with transcript: | 0bp_to_ENSMUST00000105473, NM_178675, uc007fbk.2_5end |
EntrezGene: | Slc35f1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.13e-21 | 44 |
neurectodermal cell | 1.13e-21 | 44 |
neural cell | 3.43e-21 | 43 |
neuron | 2.80e-20 | 33 |
neuronal stem cell | 2.80e-20 | 33 |
neuroblast | 2.80e-20 | 33 |
electrically signaling cell | 2.80e-20 | 33 |
electrically responsive cell | 1.71e-14 | 39 |
electrically active cell | 1.71e-14 | 39 |
CNS neuron (sensu Vertebrata) | 9.19e-14 | 23 |
neuroblast (sensu Vertebrata) | 9.19e-14 | 23 |
autonomic neuron | 1.28e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.80e-37 | 75 |
central nervous system | 1.74e-36 | 73 |
ectoderm-derived structure | 4.96e-36 | 95 |
ectoderm | 4.96e-36 | 95 |
presumptive ectoderm | 4.96e-36 | 95 |
neurectoderm | 1.38e-28 | 64 |
neural plate | 1.38e-28 | 64 |
presumptive neural plate | 1.38e-28 | 64 |
ecto-epithelium | 1.55e-26 | 73 |
regional part of nervous system | 2.11e-24 | 54 |
neural tube | 3.07e-23 | 52 |
neural rod | 3.07e-23 | 52 |
future spinal cord | 3.07e-23 | 52 |
neural keel | 3.07e-23 | 52 |
structure with developmental contribution from neural crest | 3.37e-23 | 92 |
pre-chordal neural plate | 1.79e-21 | 49 |
brain | 3.41e-20 | 47 |
future brain | 3.41e-20 | 47 |
regional part of brain | 1.05e-19 | 46 |
gray matter | 1.84e-19 | 34 |
anterior neural tube | 1.11e-18 | 40 |
regional part of forebrain | 4.19e-18 | 39 |
forebrain | 4.19e-18 | 39 |
future forebrain | 4.19e-18 | 39 |
brain grey matter | 1.36e-16 | 29 |
regional part of telencephalon | 1.36e-16 | 29 |
telencephalon | 1.36e-16 | 29 |
cerebral cortex | 7.44e-12 | 21 |
cerebral hemisphere | 7.44e-12 | 21 |
pallium | 7.44e-12 | 21 |
regional part of cerebral cortex | 8.87e-10 | 17 |
autonomic nervous system | 1.28e-07 | 9 |
peripheral nervous system | 1.44e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.