FFCP PHASE1:Mm9::chr15:98465418..98465506,+: Difference between revisions
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|id=chr15:98465418..98465506,+ | |id=chr15:98465418..98465506,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.87e-16!50;CL:0000393!8.05e-16!39;CL:0000211!8.05e-16!39;CL:0000221!9.82e-15!44;CL:0000133!9.82e-15!44;CL:0002319!1.38e-14!43;CL:0000540!1.83e-13!33;CL:0000047!1.83e-13!33;CL:0000031!1.83e-13!33;CL:0000404!1.83e-13!33;CL:0000117!1.80e-12!23;CL:0000337!1.80e-12!23;CL:0002321!9.52e-08!70;CL:0000220!9.52e-08!70 | |ontology_enrichment_celltype=CL:0000055!5.87e-16!50;CL:0000393!8.05e-16!39;CL:0000211!8.05e-16!39;CL:0000221!9.82e-15!44;CL:0000133!9.82e-15!44;CL:0002319!1.38e-14!43;CL:0000540!1.83e-13!33;CL:0000047!1.83e-13!33;CL:0000031!1.83e-13!33;CL:0000404!1.83e-13!33;CL:0000117!1.80e-12!23;CL:0000337!1.80e-12!23;CL:0002321!9.52e-08!70;CL:0000220!9.52e-08!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.82e-16,39;CL:0000211,1.82e-16,39;CL:0000221,2.49e-15,44;CL:0000133,2.49e-15,44;CL:0002319,3.55e-15,43;CL:0000540,5.29e-14,33;CL:0000047,5.29e-14,33;CL:0000031,5.29e-14,33;CL:0000404,5.29e-14,33;CL:0000117,5.78e-13,23;CL:0000337,5.78e-13,23;CL:0002321,1.55e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.97e-33!73;UBERON:0005743!2.97e-33!73;UBERON:0000073!4.09e-33!75;UBERON:0001016!4.09e-33!75;UBERON:0004121!7.13e-28!102;UBERON:0000924!7.13e-28!102;UBERON:0006601!7.13e-28!102;UBERON:0001049!7.57e-26!52;UBERON:0005068!7.57e-26!52;UBERON:0006241!7.57e-26!52;UBERON:0007135!7.57e-26!52;UBERON:0000955!1.25e-25!50;UBERON:0006238!1.25e-25!50;UBERON:0002346!7.06e-25!71;UBERON:0003075!7.06e-25!71;UBERON:0007284!7.06e-25!71;UBERON:0002616!7.51e-25!49;UBERON:0000033!3.68e-24!63;UBERON:0003080!2.25e-21!40;UBERON:0003056!3.70e-21!49;UBERON:0002780!8.73e-21!39;UBERON:0001890!8.73e-21!39;UBERON:0006240!8.73e-21!39;UBERON:0002020!5.93e-19!34;UBERON:0002791!1.39e-16!29;UBERON:0003528!1.39e-16!29;UBERON:0001893!1.39e-16!29;UBERON:0007811!3.78e-14!86;UBERON:0000153!2.74e-13!94;UBERON:0000956!1.71e-12!21;UBERON:0001869!1.71e-12!21;UBERON:0000203!1.71e-12!21;UBERON:0002619!1.54e-10!17;UBERON:0002021!4.11e-08!10;UBERON:0000411!4.11e-08!10;UBERON:0001950!4.11e-08!10 | |ontology_enrichment_uberon=UBERON:0001017!2.97e-33!73;UBERON:0005743!2.97e-33!73;UBERON:0000073!4.09e-33!75;UBERON:0001016!4.09e-33!75;UBERON:0004121!7.13e-28!102;UBERON:0000924!7.13e-28!102;UBERON:0006601!7.13e-28!102;UBERON:0001049!7.57e-26!52;UBERON:0005068!7.57e-26!52;UBERON:0006241!7.57e-26!52;UBERON:0007135!7.57e-26!52;UBERON:0000955!1.25e-25!50;UBERON:0006238!1.25e-25!50;UBERON:0002346!7.06e-25!71;UBERON:0003075!7.06e-25!71;UBERON:0007284!7.06e-25!71;UBERON:0002616!7.51e-25!49;UBERON:0000033!3.68e-24!63;UBERON:0003080!2.25e-21!40;UBERON:0003056!3.70e-21!49;UBERON:0002780!8.73e-21!39;UBERON:0001890!8.73e-21!39;UBERON:0006240!8.73e-21!39;UBERON:0002020!5.93e-19!34;UBERON:0002791!1.39e-16!29;UBERON:0003528!1.39e-16!29;UBERON:0001893!1.39e-16!29;UBERON:0007811!3.78e-14!86;UBERON:0000153!2.74e-13!94;UBERON:0000956!1.71e-12!21;UBERON:0001869!1.71e-12!21;UBERON:0000203!1.71e-12!21;UBERON:0002619!1.54e-10!17;UBERON:0002021!4.11e-08!10;UBERON:0000411!4.11e-08!10;UBERON:0001950!4.11e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.07e-34,73;UBERON:0001016,1.50e-34,75;UBERON:0004121,1.47e-29,95;UBERON:0000924,1.47e-29,95;UBERON:0006601,1.47e-29,95;UBERON:0000073,1.15e-28,54;UBERON:0002346,5.49e-28,64;UBERON:0003075,5.49e-28,64;UBERON:0007284,5.49e-28,64;UBERON:0001049,5.97e-27,52;UBERON:0005068,5.97e-27,52;UBERON:0006241,5.97e-27,52;UBERON:0007135,5.97e-27,52;UBERON:0000955,1.29e-24,47;UBERON:0006238,1.29e-24,47;UBERON:0010371,1.85e-24,73;UBERON:0002616,8.17e-24,46;UBERON:0003080,2.84e-22,40;UBERON:0003056,4.78e-22,49;UBERON:0002780,1.17e-21,39;UBERON:0001890,1.17e-21,39;UBERON:0006240,1.17e-21,39;UBERON:0002020,9.65e-20,34;UBERON:0010314,7.39e-18,92;UBERON:0003528,2.90e-17,29;UBERON:0002791,2.90e-17,29;UBERON:0001893,2.90e-17,29;UBERON:0000956,5.46e-13,21;UBERON:0001869,5.46e-13,21;UBERON:0000203,5.46e-13,21;UBERON:0002619,6.04e-11,17;UBERON:0002021,2.07e-08,10;UBERON:0000411,2.07e-08,10;UBERON:0001950,2.07e-08,10 | |||
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| ||
|short_description=p3@Cacnb3 | |short_description=p3@Cacnb3 | ||
}} | }} |
Revision as of 13:56, 14 November 2012
Short description: | p3@Cacnb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cacnb3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 223bp_to_ENSMUST00000003442, NM_007581, uc007xnc.1, uc011zza.1_5end |
EntrezGene: | Cacnb3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.82e-16 | 39 |
electrically active cell | 1.82e-16 | 39 |
ectodermal cell | 2.49e-15 | 44 |
neurectodermal cell | 2.49e-15 | 44 |
neural cell | 3.55e-15 | 43 |
neuron | 5.29e-14 | 33 |
neuronal stem cell | 5.29e-14 | 33 |
neuroblast | 5.29e-14 | 33 |
electrically signaling cell | 5.29e-14 | 33 |
CNS neuron (sensu Vertebrata) | 5.78e-13 | 23 |
neuroblast (sensu Vertebrata) | 5.78e-13 | 23 |
embryonic cell | 1.55e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.07e-34 | 73 |
nervous system | 1.50e-34 | 75 |
ectoderm-derived structure | 1.47e-29 | 95 |
ectoderm | 1.47e-29 | 95 |
presumptive ectoderm | 1.47e-29 | 95 |
regional part of nervous system | 1.15e-28 | 54 |
neurectoderm | 5.49e-28 | 64 |
neural plate | 5.49e-28 | 64 |
presumptive neural plate | 5.49e-28 | 64 |
neural tube | 5.97e-27 | 52 |
neural rod | 5.97e-27 | 52 |
future spinal cord | 5.97e-27 | 52 |
neural keel | 5.97e-27 | 52 |
brain | 1.29e-24 | 47 |
future brain | 1.29e-24 | 47 |
ecto-epithelium | 1.85e-24 | 73 |
regional part of brain | 8.17e-24 | 46 |
anterior neural tube | 2.84e-22 | 40 |
pre-chordal neural plate | 4.78e-22 | 49 |
regional part of forebrain | 1.17e-21 | 39 |
forebrain | 1.17e-21 | 39 |
future forebrain | 1.17e-21 | 39 |
gray matter | 9.65e-20 | 34 |
structure with developmental contribution from neural crest | 7.39e-18 | 92 |
brain grey matter | 2.90e-17 | 29 |
regional part of telencephalon | 2.90e-17 | 29 |
telencephalon | 2.90e-17 | 29 |
cerebral cortex | 5.46e-13 | 21 |
cerebral hemisphere | 5.46e-13 | 21 |
pallium | 5.46e-13 | 21 |
regional part of cerebral cortex | 6.04e-11 | 17 |
occipital lobe | 2.07e-08 | 10 |
visual cortex | 2.07e-08 | 10 |
neocortex | 2.07e-08 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.