FFCP PHASE1:Mm9::chr10:79602092..79602115,-: Difference between revisions
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|id=chr10:79602092..79602115,- | |id=chr10:79602092..79602115,- | ||
|ontology_enrichment_celltype=CL:0000540!6.70e-17!33;CL:0000047!6.70e-17!33;CL:0000031!6.70e-17!33;CL:0000404!6.70e-17!33;CL:0000221!2.95e-16!44;CL:0000133!2.95e-16!44;CL:0002319!6.06e-16!43;CL:0000117!1.21e-14!23;CL:0000337!1.21e-14!23;CL:0000393!2.62e-13!39;CL:0000211!2.62e-13!39;CL:0000055!3.82e-12!50 | |ontology_enrichment_celltype=CL:0000540!6.70e-17!33;CL:0000047!6.70e-17!33;CL:0000031!6.70e-17!33;CL:0000404!6.70e-17!33;CL:0000221!2.95e-16!44;CL:0000133!2.95e-16!44;CL:0002319!6.06e-16!43;CL:0000117!1.21e-14!23;CL:0000337!1.21e-14!23;CL:0000393!2.62e-13!39;CL:0000211!2.62e-13!39;CL:0000055!3.82e-12!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.46e-17,33;CL:0000047,5.46e-17,33;CL:0000031,5.46e-17,33;CL:0000404,5.46e-17,33;CL:0000221,2.43e-16,44;CL:0000133,2.43e-16,44;CL:0002319,5.01e-16,43;CL:0000117,1.02e-14,23;CL:0000337,1.02e-14,23;CL:0000393,2.24e-13,39;CL:0000211,2.24e-13,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.36e-36!73;UBERON:0005743!9.36e-36!73;UBERON:0004121!1.08e-34!102;UBERON:0000924!1.08e-34!102;UBERON:0006601!1.08e-34!102;UBERON:0000073!1.40e-34!75;UBERON:0001016!1.40e-34!75;UBERON:0002346!1.89e-29!71;UBERON:0003075!1.89e-29!71;UBERON:0007284!1.89e-29!71;UBERON:0001049!2.05e-27!52;UBERON:0005068!2.05e-27!52;UBERON:0006241!2.05e-27!52;UBERON:0007135!2.05e-27!52;UBERON:0000955!9.02e-26!50;UBERON:0006238!9.02e-26!50;UBERON:0000033!3.64e-25!63;UBERON:0002616!3.82e-25!49;UBERON:0003056!9.72e-22!49;UBERON:0003080!2.28e-21!40;UBERON:0002780!1.22e-20!39;UBERON:0001890!1.22e-20!39;UBERON:0006240!1.22e-20!39;UBERON:0002020!4.24e-19!34;UBERON:0007811!3.15e-17!86;UBERON:0000153!4.30e-17!94;UBERON:0002791!1.33e-15!29;UBERON:0003528!1.33e-15!29;UBERON:0001893!1.33e-15!29;UBERON:0000956!1.27e-10!21;UBERON:0001869!1.27e-10!21;UBERON:0000203!1.27e-10!21;UBERON:0002619!6.84e-09!17 | |ontology_enrichment_uberon=UBERON:0001017!9.36e-36!73;UBERON:0005743!9.36e-36!73;UBERON:0004121!1.08e-34!102;UBERON:0000924!1.08e-34!102;UBERON:0006601!1.08e-34!102;UBERON:0000073!1.40e-34!75;UBERON:0001016!1.40e-34!75;UBERON:0002346!1.89e-29!71;UBERON:0003075!1.89e-29!71;UBERON:0007284!1.89e-29!71;UBERON:0001049!2.05e-27!52;UBERON:0005068!2.05e-27!52;UBERON:0006241!2.05e-27!52;UBERON:0007135!2.05e-27!52;UBERON:0000955!9.02e-26!50;UBERON:0006238!9.02e-26!50;UBERON:0000033!3.64e-25!63;UBERON:0002616!3.82e-25!49;UBERON:0003056!9.72e-22!49;UBERON:0003080!2.28e-21!40;UBERON:0002780!1.22e-20!39;UBERON:0001890!1.22e-20!39;UBERON:0006240!1.22e-20!39;UBERON:0002020!4.24e-19!34;UBERON:0007811!3.15e-17!86;UBERON:0000153!4.30e-17!94;UBERON:0002791!1.33e-15!29;UBERON:0003528!1.33e-15!29;UBERON:0001893!1.33e-15!29;UBERON:0000956!1.27e-10!21;UBERON:0001869!1.27e-10!21;UBERON:0000203!1.27e-10!21;UBERON:0002619!6.84e-09!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.93e-36,73;UBERON:0001016,9.00e-35,75;UBERON:0004121,4.12e-34,95;UBERON:0000924,4.12e-34,95;UBERON:0006601,4.12e-34,95;UBERON:0002346,1.96e-29,64;UBERON:0003075,1.96e-29,64;UBERON:0007284,1.96e-29,64;UBERON:0000073,4.20e-29,54;UBERON:0010371,1.38e-28,73;UBERON:0001049,1.45e-27,52;UBERON:0005068,1.45e-27,52;UBERON:0006241,1.45e-27,52;UBERON:0007135,1.45e-27,52;UBERON:0000955,9.17e-24,47;UBERON:0006238,9.17e-24,47;UBERON:0002616,3.81e-23,46;UBERON:0003056,7.43e-22,49;UBERON:0003080,1.75e-21,40;UBERON:0002780,9.44e-21,39;UBERON:0001890,9.44e-21,39;UBERON:0006240,9.44e-21,39;UBERON:0002020,3.36e-19,34;UBERON:0010314,2.03e-16,92;UBERON:0003528,1.11e-15,29;UBERON:0002791,1.11e-15,29;UBERON:0001893,1.11e-15,29;UBERON:0000956,1.12e-10,21;UBERON:0001869,1.12e-10,21;UBERON:0000203,1.12e-10,21;UBERON:0002619,6.21e-09,17 | |||
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| ||
|short_description=p1@Dos | |short_description=p1@Dos | ||
}} | }} |
Revision as of 17:01, 14 November 2012
Short description: | p1@Dos |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dos_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | 0bp_to_ENSMUST00000105369, ENSMUST00000132523, ENSMUST00000147778, ENSMUST00000170219, NR_036582, uc007gbx.1_5end |
EntrezGene: | Dos |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.46e-17 | 33 |
neuronal stem cell | 5.46e-17 | 33 |
neuroblast | 5.46e-17 | 33 |
electrically signaling cell | 5.46e-17 | 33 |
ectodermal cell | 2.43e-16 | 44 |
neurectodermal cell | 2.43e-16 | 44 |
neural cell | 5.01e-16 | 43 |
CNS neuron (sensu Vertebrata) | 1.02e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.02e-14 | 23 |
electrically responsive cell | 2.24e-13 | 39 |
electrically active cell | 2.24e-13 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.93e-36 | 73 |
nervous system | 9.00e-35 | 75 |
ectoderm-derived structure | 4.12e-34 | 95 |
ectoderm | 4.12e-34 | 95 |
presumptive ectoderm | 4.12e-34 | 95 |
neurectoderm | 1.96e-29 | 64 |
neural plate | 1.96e-29 | 64 |
presumptive neural plate | 1.96e-29 | 64 |
regional part of nervous system | 4.20e-29 | 54 |
ecto-epithelium | 1.38e-28 | 73 |
neural tube | 1.45e-27 | 52 |
neural rod | 1.45e-27 | 52 |
future spinal cord | 1.45e-27 | 52 |
neural keel | 1.45e-27 | 52 |
brain | 9.17e-24 | 47 |
future brain | 9.17e-24 | 47 |
regional part of brain | 3.81e-23 | 46 |
pre-chordal neural plate | 7.43e-22 | 49 |
anterior neural tube | 1.75e-21 | 40 |
regional part of forebrain | 9.44e-21 | 39 |
forebrain | 9.44e-21 | 39 |
future forebrain | 9.44e-21 | 39 |
gray matter | 3.36e-19 | 34 |
structure with developmental contribution from neural crest | 2.03e-16 | 92 |
brain grey matter | 1.11e-15 | 29 |
regional part of telencephalon | 1.11e-15 | 29 |
telencephalon | 1.11e-15 | 29 |
cerebral cortex | 1.12e-10 | 21 |
cerebral hemisphere | 1.12e-10 | 21 |
pallium | 1.12e-10 | 21 |
regional part of cerebral cortex | 6.21e-09 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.