FFCP PHASE1:Mm9::chr18:15222069..15222126,-: Difference between revisions
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|id=chr18:15222069..15222126,- | |id=chr18:15222069..15222126,- | ||
|ontology_enrichment_celltype=CL:0000540!1.82e-16!33;CL:0000047!1.82e-16!33;CL:0000031!1.82e-16!33;CL:0000404!1.82e-16!33;CL:0002319!4.24e-15!43;CL:0000221!6.10e-15!44;CL:0000133!6.10e-15!44;CL:0000117!9.03e-14!23;CL:0000337!9.03e-14!23;CL:0000393!9.95e-12!39;CL:0000211!9.95e-12!39;CL:0000055!1.95e-10!50 | |ontology_enrichment_celltype=CL:0000540!1.82e-16!33;CL:0000047!1.82e-16!33;CL:0000031!1.82e-16!33;CL:0000404!1.82e-16!33;CL:0002319!4.24e-15!43;CL:0000221!6.10e-15!44;CL:0000133!6.10e-15!44;CL:0000117!9.03e-14!23;CL:0000337!9.03e-14!23;CL:0000393!9.95e-12!39;CL:0000211!9.95e-12!39;CL:0000055!1.95e-10!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.50e-16,33;CL:0000047,1.50e-16,33;CL:0000031,1.50e-16,33;CL:0000404,1.50e-16,33;CL:0002319,3.57e-15,43;CL:0000221,5.15e-15,44;CL:0000133,5.15e-15,44;CL:0000117,7.73e-14,23;CL:0000337,7.73e-14,23;CL:0000393,8.75e-12,39;CL:0000211,8.75e-12,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.30e-27!73;UBERON:0005743!1.30e-27!73;UBERON:0000073!1.43e-26!75;UBERON:0001016!1.43e-26!75;UBERON:0004121!1.05e-25!102;UBERON:0000924!1.05e-25!102;UBERON:0006601!1.05e-25!102;UBERON:0002346!3.74e-22!71;UBERON:0003075!3.74e-22!71;UBERON:0007284!3.74e-22!71;UBERON:0001049!6.07e-20!52;UBERON:0005068!6.07e-20!52;UBERON:0006241!6.07e-20!52;UBERON:0007135!6.07e-20!52;UBERON:0000033!7.77e-20!63;UBERON:0000153!1.53e-19!94;UBERON:0000955!6.86e-19!50;UBERON:0006238!6.86e-19!50;UBERON:0002616!2.28e-18!49;UBERON:0007811!2.36e-18!86;UBERON:0003056!2.75e-16!49;UBERON:0002020!8.65e-16!34;UBERON:0003080!4.39e-15!40;UBERON:0002780!1.43e-14!39;UBERON:0001890!1.43e-14!39;UBERON:0006240!1.43e-14!39;UBERON:0002791!5.22e-13!29;UBERON:0003528!5.22e-13!29;UBERON:0001893!5.22e-13!29;UBERON:0000956!2.29e-08!21;UBERON:0001869!2.29e-08!21;UBERON:0000203!2.29e-08!21;UBERON:0002619!6.53e-07!17 | |ontology_enrichment_uberon=UBERON:0001017!1.30e-27!73;UBERON:0005743!1.30e-27!73;UBERON:0000073!1.43e-26!75;UBERON:0001016!1.43e-26!75;UBERON:0004121!1.05e-25!102;UBERON:0000924!1.05e-25!102;UBERON:0006601!1.05e-25!102;UBERON:0002346!3.74e-22!71;UBERON:0003075!3.74e-22!71;UBERON:0007284!3.74e-22!71;UBERON:0001049!6.07e-20!52;UBERON:0005068!6.07e-20!52;UBERON:0006241!6.07e-20!52;UBERON:0007135!6.07e-20!52;UBERON:0000033!7.77e-20!63;UBERON:0000153!1.53e-19!94;UBERON:0000955!6.86e-19!50;UBERON:0006238!6.86e-19!50;UBERON:0002616!2.28e-18!49;UBERON:0007811!2.36e-18!86;UBERON:0003056!2.75e-16!49;UBERON:0002020!8.65e-16!34;UBERON:0003080!4.39e-15!40;UBERON:0002780!1.43e-14!39;UBERON:0001890!1.43e-14!39;UBERON:0006240!1.43e-14!39;UBERON:0002791!5.22e-13!29;UBERON:0003528!5.22e-13!29;UBERON:0001893!5.22e-13!29;UBERON:0000956!2.29e-08!21;UBERON:0001869!2.29e-08!21;UBERON:0000203!2.29e-08!21;UBERON:0002619!6.53e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.32e-28,73;UBERON:0001016,1.04e-26,75;UBERON:0004121,2.70e-25,95;UBERON:0000924,2.70e-25,95;UBERON:0006601,2.70e-25,95;UBERON:0002346,2.39e-22,64;UBERON:0003075,2.39e-22,64;UBERON:0007284,2.39e-22,64;UBERON:0000073,2.05e-21,54;UBERON:0001049,4.80e-20,52;UBERON:0005068,4.80e-20,52;UBERON:0006241,4.80e-20,52;UBERON:0007135,4.80e-20,52;UBERON:0010314,3.98e-19,92;UBERON:0010371,5.41e-19,73;UBERON:0000955,3.46e-17,47;UBERON:0006238,3.46e-17,47;UBERON:0002616,1.12e-16,46;UBERON:0003056,2.28e-16,49;UBERON:0002020,7.22e-16,34;UBERON:0003080,3.70e-15,40;UBERON:0002780,1.21e-14,39;UBERON:0001890,1.21e-14,39;UBERON:0006240,1.21e-14,39;UBERON:0003528,4.52e-13,29;UBERON:0002791,4.52e-13,29;UBERON:0001893,4.52e-13,29;UBERON:0000956,2.10e-08,21;UBERON:0001869,2.10e-08,21;UBERON:0000203,2.10e-08,21;UBERON:0002619,6.09e-07,17 | |||
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| ||
|short_description=p1@Kctd1 | |short_description=p1@Kctd1 | ||
}} | }} |
Revision as of 20:52, 14 November 2012
Short description: | p1@Kctd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kctd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:720 |
Association with transcript: | 0bp_to_ENSMUST00000168989, NM_001142731, uc008edn.2, uc008edp.2_5end |
EntrezGene: | Kctd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.50e-16 | 33 |
neuronal stem cell | 1.50e-16 | 33 |
neuroblast | 1.50e-16 | 33 |
electrically signaling cell | 1.50e-16 | 33 |
neural cell | 3.57e-15 | 43 |
ectodermal cell | 5.15e-15 | 44 |
neurectodermal cell | 5.15e-15 | 44 |
CNS neuron (sensu Vertebrata) | 7.73e-14 | 23 |
neuroblast (sensu Vertebrata) | 7.73e-14 | 23 |
electrically responsive cell | 8.75e-12 | 39 |
electrically active cell | 8.75e-12 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.32e-28 | 73 |
nervous system | 1.04e-26 | 75 |
ectoderm-derived structure | 2.70e-25 | 95 |
ectoderm | 2.70e-25 | 95 |
presumptive ectoderm | 2.70e-25 | 95 |
neurectoderm | 2.39e-22 | 64 |
neural plate | 2.39e-22 | 64 |
presumptive neural plate | 2.39e-22 | 64 |
regional part of nervous system | 2.05e-21 | 54 |
neural tube | 4.80e-20 | 52 |
neural rod | 4.80e-20 | 52 |
future spinal cord | 4.80e-20 | 52 |
neural keel | 4.80e-20 | 52 |
structure with developmental contribution from neural crest | 3.98e-19 | 92 |
ecto-epithelium | 5.41e-19 | 73 |
brain | 3.46e-17 | 47 |
future brain | 3.46e-17 | 47 |
regional part of brain | 1.12e-16 | 46 |
pre-chordal neural plate | 2.28e-16 | 49 |
gray matter | 7.22e-16 | 34 |
anterior neural tube | 3.70e-15 | 40 |
regional part of forebrain | 1.21e-14 | 39 |
forebrain | 1.21e-14 | 39 |
future forebrain | 1.21e-14 | 39 |
brain grey matter | 4.52e-13 | 29 |
regional part of telencephalon | 4.52e-13 | 29 |
telencephalon | 4.52e-13 | 29 |
cerebral cortex | 2.10e-08 | 21 |
cerebral hemisphere | 2.10e-08 | 21 |
pallium | 2.10e-08 | 21 |
regional part of cerebral cortex | 6.09e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.