FFCP PHASE1:Mm9::chr16:32419782..32419839,+: Difference between revisions
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|id=chr16:32419782..32419839,+ | |id=chr16:32419782..32419839,+ | ||
|ontology_enrichment_celltype=CL:0000221!1.23e-13!44;CL:0000133!1.23e-13!44;CL:0002319!2.86e-13!43;CL:0000117!5.99e-12!23;CL:0000337!5.99e-12!23;CL:0000055!2.65e-11!50;CL:0000540!6.56e-11!33;CL:0000047!6.56e-11!33;CL:0000031!6.56e-11!33;CL:0000404!6.56e-11!33;CL:0000393!4.17e-09!39;CL:0000211!4.17e-09!39 | |ontology_enrichment_celltype=CL:0000221!1.23e-13!44;CL:0000133!1.23e-13!44;CL:0002319!2.86e-13!43;CL:0000117!5.99e-12!23;CL:0000337!5.99e-12!23;CL:0000055!2.65e-11!50;CL:0000540!6.56e-11!33;CL:0000047!6.56e-11!33;CL:0000031!6.56e-11!33;CL:0000404!6.56e-11!33;CL:0000393!4.17e-09!39;CL:0000211!4.17e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.22e-13,44;CL:0000133,1.22e-13,44;CL:0002319,2.84e-13,43;CL:0000117,5.96e-12,23;CL:0000337,5.96e-12,23;CL:0000540,6.53e-11,33;CL:0000047,6.53e-11,33;CL:0000031,6.53e-11,33;CL:0000404,6.53e-11,33;CL:0000393,4.15e-09,39;CL:0000211,4.15e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.49e-25!75;UBERON:0001016!5.49e-25!75;UBERON:0001017!1.93e-24!73;UBERON:0005743!1.93e-24!73;UBERON:0000033!9.17e-20!63;UBERON:0001049!1.61e-19!52;UBERON:0005068!1.61e-19!52;UBERON:0006241!1.61e-19!52;UBERON:0007135!1.61e-19!52;UBERON:0004121!4.11e-19!102;UBERON:0000924!4.11e-19!102;UBERON:0006601!4.11e-19!102;UBERON:0002020!1.95e-18!34;UBERON:0000955!3.36e-18!50;UBERON:0006238!3.36e-18!50;UBERON:0002346!4.56e-18!71;UBERON:0003075!4.56e-18!71;UBERON:0007284!4.56e-18!71;UBERON:0002616!1.10e-17!49;UBERON:0003056!2.24e-16!49;UBERON:0002791!2.14e-15!29;UBERON:0003528!2.14e-15!29;UBERON:0001893!2.14e-15!29;UBERON:0003080!1.27e-14!40;UBERON:0002780!3.87e-14!39;UBERON:0001890!3.87e-14!39;UBERON:0006240!3.87e-14!39;UBERON:0000956!2.49e-11!21;UBERON:0001869!2.49e-11!21;UBERON:0000203!2.49e-11!21;UBERON:0002619!7.68e-10!17;UBERON:0007811!1.64e-07!86;UBERON:0002021!3.86e-07!10;UBERON:0000411!3.86e-07!10;UBERON:0001950!3.86e-07!10;UBERON:0000025!6.91e-07!114 | |ontology_enrichment_uberon=UBERON:0000073!5.49e-25!75;UBERON:0001016!5.49e-25!75;UBERON:0001017!1.93e-24!73;UBERON:0005743!1.93e-24!73;UBERON:0000033!9.17e-20!63;UBERON:0001049!1.61e-19!52;UBERON:0005068!1.61e-19!52;UBERON:0006241!1.61e-19!52;UBERON:0007135!1.61e-19!52;UBERON:0004121!4.11e-19!102;UBERON:0000924!4.11e-19!102;UBERON:0006601!4.11e-19!102;UBERON:0002020!1.95e-18!34;UBERON:0000955!3.36e-18!50;UBERON:0006238!3.36e-18!50;UBERON:0002346!4.56e-18!71;UBERON:0003075!4.56e-18!71;UBERON:0007284!4.56e-18!71;UBERON:0002616!1.10e-17!49;UBERON:0003056!2.24e-16!49;UBERON:0002791!2.14e-15!29;UBERON:0003528!2.14e-15!29;UBERON:0001893!2.14e-15!29;UBERON:0003080!1.27e-14!40;UBERON:0002780!3.87e-14!39;UBERON:0001890!3.87e-14!39;UBERON:0006240!3.87e-14!39;UBERON:0000956!2.49e-11!21;UBERON:0001869!2.49e-11!21;UBERON:0000203!2.49e-11!21;UBERON:0002619!7.68e-10!17;UBERON:0007811!1.64e-07!86;UBERON:0002021!3.86e-07!10;UBERON:0000411!3.86e-07!10;UBERON:0001950!3.86e-07!10;UBERON:0000025!6.91e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.42e-25,75;UBERON:0001017,1.90e-24,73;UBERON:0004121,3.44e-21,95;UBERON:0000924,3.44e-21,95;UBERON:0006601,3.44e-21,95;UBERON:0002346,6.04e-21,64;UBERON:0003075,6.04e-21,64;UBERON:0007284,6.04e-21,64;UBERON:0000073,9.13e-21,54;UBERON:0010314,1.31e-19,92;UBERON:0001049,1.59e-19,52;UBERON:0005068,1.59e-19,52;UBERON:0006241,1.59e-19,52;UBERON:0007135,1.59e-19,52;UBERON:0002020,1.93e-18,34;UBERON:0010371,2.48e-17,73;UBERON:0000955,1.50e-16,47;UBERON:0006238,1.50e-16,47;UBERON:0003056,2.22e-16,49;UBERON:0002616,4.82e-16,46;UBERON:0003528,2.12e-15,29;UBERON:0002791,2.12e-15,29;UBERON:0001893,2.12e-15,29;UBERON:0003080,1.26e-14,40;UBERON:0002780,3.84e-14,39;UBERON:0001890,3.84e-14,39;UBERON:0006240,3.84e-14,39;UBERON:0000956,2.47e-11,21;UBERON:0001869,2.47e-11,21;UBERON:0000203,2.47e-11,21;UBERON:0002619,7.64e-10,17;UBERON:0002021,3.85e-07,10;UBERON:0000411,3.85e-07,10;UBERON:0001950,3.85e-07,10;UBERON:0000025,7.25e-07,114 | |||
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| ||
|short_description=p2@Tctex1d2 | |short_description=p2@Tctex1d2 | ||
}} | }} |
Revision as of 02:04, 15 November 2012
Short description: | p2@Tctex1d2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tctex1d2_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000014220, ENSMUST00000080316, NM_025329, uc007yyt.1, uc007yyu.1_5end |
EntrezGene: | Tctex1d2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.22e-13 | 44 |
neurectodermal cell | 1.22e-13 | 44 |
neural cell | 2.84e-13 | 43 |
CNS neuron (sensu Vertebrata) | 5.96e-12 | 23 |
neuroblast (sensu Vertebrata) | 5.96e-12 | 23 |
neuron | 6.53e-11 | 33 |
neuronal stem cell | 6.53e-11 | 33 |
neuroblast | 6.53e-11 | 33 |
electrically signaling cell | 6.53e-11 | 33 |
electrically responsive cell | 4.15e-09 | 39 |
electrically active cell | 4.15e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.42e-25 | 75 |
central nervous system | 1.90e-24 | 73 |
ectoderm-derived structure | 3.44e-21 | 95 |
ectoderm | 3.44e-21 | 95 |
presumptive ectoderm | 3.44e-21 | 95 |
neurectoderm | 6.04e-21 | 64 |
neural plate | 6.04e-21 | 64 |
presumptive neural plate | 6.04e-21 | 64 |
regional part of nervous system | 9.13e-21 | 54 |
structure with developmental contribution from neural crest | 1.31e-19 | 92 |
neural tube | 1.59e-19 | 52 |
neural rod | 1.59e-19 | 52 |
future spinal cord | 1.59e-19 | 52 |
neural keel | 1.59e-19 | 52 |
gray matter | 1.93e-18 | 34 |
ecto-epithelium | 2.48e-17 | 73 |
brain | 1.50e-16 | 47 |
future brain | 1.50e-16 | 47 |
pre-chordal neural plate | 2.22e-16 | 49 |
regional part of brain | 4.82e-16 | 46 |
brain grey matter | 2.12e-15 | 29 |
regional part of telencephalon | 2.12e-15 | 29 |
telencephalon | 2.12e-15 | 29 |
anterior neural tube | 1.26e-14 | 40 |
regional part of forebrain | 3.84e-14 | 39 |
forebrain | 3.84e-14 | 39 |
future forebrain | 3.84e-14 | 39 |
cerebral cortex | 2.47e-11 | 21 |
cerebral hemisphere | 2.47e-11 | 21 |
pallium | 2.47e-11 | 21 |
regional part of cerebral cortex | 7.64e-10 | 17 |
occipital lobe | 3.85e-07 | 10 |
visual cortex | 3.85e-07 | 10 |
neocortex | 3.85e-07 | 10 |
tube | 7.25e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.