FFCP PHASE1:Hg19::chr19:16187296..16187344,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!4.44e-35!180;CL:0002371!4.23e-31!591;CL:0000144!4.63e-31!625;CL:0000548!2.88e-27!679;CL:0000004!2.88e-27!679;CL:0000255!2.88e-27!679;CL:0000012!8.50e-27!682;CL:0000048!8.44e-22!430;CL:0000723!8.36e-21!436;CL:0000034!4.69e-20!444;CL:0000680!1.62e-17!57;CL:0000056!1.62e-17!57;CL:0000355!1.62e-17!57;CL:0000222!7.06e-17!119;CL:0000187!3.12e-16!54;CL:0000003!9.63e-16!722;CL:0000057!2.27e-15!75;CL:0000183!1.61e-14!59;CL:0000393!1.83e-14!60;CL:0000211!1.83e-14!60;CL:0000192!2.64e-13!42;CL:0000514!2.64e-13!42;CL:0000359!7.35e-11!32;CL:0000220!1.27e-09!246;CL:0002321!1.60e-09!248;CL:0002320!1.03e-08!365;CL:0000134!5.07e-08!358;CL:0000219!1.24e-07!390 | |ontology_enrichment_celltype=CL:0000055!4.44e-35!180;CL:0002371!4.23e-31!591;CL:0000144!4.63e-31!625;CL:0000548!2.88e-27!679;CL:0000004!2.88e-27!679;CL:0000255!2.88e-27!679;CL:0000012!8.50e-27!682;CL:0000048!8.44e-22!430;CL:0000723!8.36e-21!436;CL:0000034!4.69e-20!444;CL:0000680!1.62e-17!57;CL:0000056!1.62e-17!57;CL:0000355!1.62e-17!57;CL:0000222!7.06e-17!119;CL:0000187!3.12e-16!54;CL:0000003!9.63e-16!722;CL:0000057!2.27e-15!75;CL:0000183!1.61e-14!59;CL:0000393!1.83e-14!60;CL:0000211!1.83e-14!60;CL:0000192!2.64e-13!42;CL:0000514!2.64e-13!42;CL:0000359!7.35e-11!32;CL:0000220!1.27e-09!246;CL:0002321!1.60e-09!248;CL:0002320!1.03e-08!365;CL:0000134!5.07e-08!358;CL:0000219!1.24e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.03e-10;32!CL:0000192;1.06e-09;43!CL:0000187;1.33e-09;55!CL:0000393;7.08e-08;61!CL:0000211;7.08e-08;61!CL:0000057;2.84e-07;73!CL:0000860;8.39e-07;33!CL:0002057;8.39e-07;33 | |ontology_enrichment_celltype_v019=CL:0000359;4.03e-10;32!CL:0000192;1.06e-09;43!CL:0000187;1.33e-09;55!CL:0000393;7.08e-08;61!CL:0000211;7.08e-08;61!CL:0000057;2.84e-07;73!CL:0000860;8.39e-07;33!CL:0002057;8.39e-07;33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.55e-22,427;CL:0000723,1.61e-21,433;CL:0000034,9.44e-21,441;CL:0000680,5.10e-18,58;CL:0000056,5.10e-18,58;CL:0000355,5.10e-18,58;CL:0000222,3.02e-17,121;CL:0000187,9.95e-17,55;CL:0000057,6.44e-16,76;CL:0000393,6.19e-15,61;CL:0000211,6.19e-15,61;CL:0000192,8.50e-14,43;CL:0000514,8.50e-14,43;CL:0000359,7.35e-11,32;CL:0002321,8.34e-10,250;CL:0002320,6.37e-09,361;CL:0000134,3.18e-08,354;CL:0000219,8.14e-08,386 | |||
|ontology_enrichment_development_v019=CL:0000355;4.68e-10;58!CL:0000514;1.06e-09;43 | |ontology_enrichment_development_v019=CL:0000355;4.68e-10;58!CL:0000514;1.06e-09;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.00e-21!83;UBERON:0002329!5.00e-21!83;UBERON:0003077!5.00e-21!83;UBERON:0003059!5.00e-21!83;UBERON:0007282!5.00e-21!83;UBERON:0009618!5.00e-21!83;UBERON:0007285!5.00e-21!83;UBERON:0002204!1.42e-17!167;UBERON:0004290!1.77e-17!70;UBERON:0000486!9.77e-16!82;UBERON:0001134!2.18e-15!61;UBERON:0002036!2.18e-15!61;UBERON:0003082!2.18e-15!61;UBERON:0002049!4.63e-15!79;UBERON:0007798!4.63e-15!79;UBERON:0002385!1.97e-14!63;UBERON:0001015!1.97e-14!63;UBERON:0000383!1.97e-14!63;UBERON:0004872!1.53e-13!84;UBERON:0004535!2.33e-13!110;UBERON:0005256!4.25e-13!143;UBERON:0000055!9.95e-13!69;UBERON:0001009!2.36e-12!113;UBERON:0001981!2.70e-12!60;UBERON:0007500!2.70e-12!60;UBERON:0004537!2.70e-12!60;UBERON:0006965!2.70e-12!60;UBERON:0000926!1.24e-11!448;UBERON:0004120!1.24e-11!448;UBERON:0006603!1.24e-11!448;UBERON:0003081!1.20e-10!216;UBERON:0001637!4.27e-10!42;UBERON:0003509!4.27e-10!42;UBERON:0004572!4.27e-10!42;UBERON:0002384!1.93e-09!375;UBERON:0000490!2.44e-09!138;UBERON:0003914!4.26e-08!118;UBERON:0004573!4.86e-08!33;UBERON:0004571!4.86e-08!33;UBERON:0002100!7.19e-07!216 | |ontology_enrichment_uberon=UBERON:0000914!5.00e-21!83;UBERON:0002329!5.00e-21!83;UBERON:0003077!5.00e-21!83;UBERON:0003059!5.00e-21!83;UBERON:0007282!5.00e-21!83;UBERON:0009618!5.00e-21!83;UBERON:0007285!5.00e-21!83;UBERON:0002204!1.42e-17!167;UBERON:0004290!1.77e-17!70;UBERON:0000486!9.77e-16!82;UBERON:0001134!2.18e-15!61;UBERON:0002036!2.18e-15!61;UBERON:0003082!2.18e-15!61;UBERON:0002049!4.63e-15!79;UBERON:0007798!4.63e-15!79;UBERON:0002385!1.97e-14!63;UBERON:0001015!1.97e-14!63;UBERON:0000383!1.97e-14!63;UBERON:0004872!1.53e-13!84;UBERON:0004535!2.33e-13!110;UBERON:0005256!4.25e-13!143;UBERON:0000055!9.95e-13!69;UBERON:0001009!2.36e-12!113;UBERON:0001981!2.70e-12!60;UBERON:0007500!2.70e-12!60;UBERON:0004537!2.70e-12!60;UBERON:0006965!2.70e-12!60;UBERON:0000926!1.24e-11!448;UBERON:0004120!1.24e-11!448;UBERON:0006603!1.24e-11!448;UBERON:0003081!1.20e-10!216;UBERON:0001637!4.27e-10!42;UBERON:0003509!4.27e-10!42;UBERON:0004572!4.27e-10!42;UBERON:0002384!1.93e-09!375;UBERON:0000490!2.44e-09!138;UBERON:0003914!4.26e-08!118;UBERON:0004573!4.86e-08!33;UBERON:0004571!4.86e-08!33;UBERON:0002100!7.19e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.01e-07;33!UBERON:0004571;2.01e-07;33!UBERON:0001637;3.84e-07;42!UBERON:0003509;3.84e-07;42!UBERON:0004572;3.84e-07;42!UBERON:0007500;5.07e-07;56!UBERON:0001981;5.07e-07;56!UBERON:0004537;5.07e-07;56 | |ontology_enrichment_uberon_v019=UBERON:0004573;2.01e-07;33!UBERON:0004571;2.01e-07;33!UBERON:0001637;3.84e-07;42!UBERON:0003509;3.84e-07;42!UBERON:0004572;3.84e-07;42!UBERON:0007500;5.07e-07;56!UBERON:0001981;5.07e-07;56!UBERON:0004537;5.07e-07;56 | ||
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| ||
|short_description=p1@TPM4 | |short_description=p1@TPM4 | ||
}} | }} |
Revision as of 17:14, 20 November 2012
Short description: | p1@TPM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TPM4_5end |
Coexpression cluster: | NA |
Association with transcript: | 161bp_to_ENST00000300933, NM_003290, uc002ndj.2_5end |
EntrezGene: | TPM4 |
HGNC: | 12013 |
UniProt: | P67936 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.55e-22 | 427 |
somatic stem cell | 1.61e-21 | 433 |
stem cell | 9.44e-21 | 441 |
muscle precursor cell | 5.10e-18 | 58 |
myoblast | 5.10e-18 | 58 |
multi-potent skeletal muscle stem cell | 5.10e-18 | 58 |
mesodermal cell | 3.02e-17 | 121 |
muscle cell | 9.95e-17 | 55 |
fibroblast | 6.44e-16 | 76 |
electrically responsive cell | 6.19e-15 | 61 |
electrically active cell | 6.19e-15 | 61 |
smooth muscle cell | 8.50e-14 | 43 |
smooth muscle myoblast | 8.50e-14 | 43 |
vascular associated smooth muscle cell | 7.35e-11 | 32 |
embryonic cell | 8.34e-10 | 250 |
connective tissue cell | 6.37e-09 | 361 |
mesenchymal cell | 3.18e-08 | 354 |
motile cell | 8.14e-08 | 386 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.