Coexpression cluster:C65

Full id: C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils

Phase1 CAGE Peaks

Hg19::chr10:106013923..106013945,+	p2@GSTO1
Hg19::chr10:134143566..134143586,+	p@chr10:134143566..134143586 +
Hg19::chr10:135106730..135106743,-	p@chr10:135106730..135106743 -
Hg19::chr10:20107406..20107413,-	p@chr10:20107406..20107413 -
Hg19::chr10:50396384..50396403,-	p2@C10orf128
Hg19::chr10:50396407..50396424,-	p3@C10orf128
Hg19::chr10:50396425..50396450,-	p1@C10orf128
Hg19::chr10:5326456..5326474,-	p@chr10:5326456..5326474 -
Hg19::chr10:5326485..5326513,-	p@chr10:5326485..5326513 -
Hg19::chr10:81001828..81001846,+	p@chr10:81001828..81001846 +
Hg19::chr10:81002081..81002137,+	p@chr10:81002081..81002137 +
Hg19::chr10:81002418..81002443,+	p@chr10:81002418..81002443 +
Hg19::chr10:81002444..81002451,+	p@chr10:81002444..81002451 +
Hg19::chr10:81002459..81002470,+	p@chr10:81002459..81002470 +
Hg19::chr10:81002490..81002499,+	p@chr10:81002490..81002499 +
Hg19::chr10:81002562..81002621,+	p@chr10:81002562..81002621 +
Hg19::chr10:81002638..81002652,+	p@chr10:81002638..81002652 +
Hg19::chr10:81002662..81002681,+	p@chr10:81002662..81002681 +
Hg19::chr10:81002783..81002848,+	p@chr10:81002783..81002848 +
Hg19::chr10:81002901..81002909,+	p@chr10:81002901..81002909 +
Hg19::chr10:81002927..81002938,+	p14@ZMIZ1
Hg19::chr10:81028098..81028109,+	p@chr10:81028098..81028109 +
Hg19::chr10:81028292..81028314,+	p@chr10:81028292..81028314 +
Hg19::chr10:81030821..81030823,+	p@chr10:81030821..81030823 +
Hg19::chr10:81034064..81034081,-	p@chr10:81034064..81034081 -
Hg19::chr10:81036999..81037047,+	p7@ZMIZ1
Hg19::chr10:81048292..81048324,+	p@chr10:81048292..81048324 +
Hg19::chr10:81049531..81049547,+	p@chr10:81049531..81049547 +
Hg19::chr10:81049616..81049623,+	p@chr10:81049616..81049623 +
Hg19::chr10:81051907..81051935,+	p@chr10:81051907..81051935 +
Hg19::chr10:81052746..81052768,+	p@chr10:81052746..81052768 +
Hg19::chr10:81053101..81053113,+	p@chr10:81053101..81053113 +
Hg19::chr10:81053128..81053171,+	p@chr10:81053128..81053171 +
Hg19::chr10:81058206..81058225,+	p@chr10:81058206..81058225 +
Hg19::chr10:81058659..81058670,+	p@chr10:81058659..81058670 +
Hg19::chr10:81058684..81058709,+	p@chr10:81058684..81058709 +
Hg19::chr10:81058729..81058759,+	p@chr10:81058729..81058759 +
Hg19::chr10:81058831..81058838,+	p@chr10:81058831..81058838 +
Hg19::chr10:81107216..81107237,+	p1@PPIF
Hg19::chr10:81109447..81109460,+	p4@PPIF
Hg19::chr10:81111293..81111304,+	p@chr10:81111293..81111304 +
Hg19::chr10:81112062..81112114,+	p@chr10:81112062..81112114 +
Hg19::chr10:81113608..81113707,+	p@chr10:81113608..81113707 +
Hg19::chr10:81113718..81113778,+	p@chr10:81113718..81113778 +
Hg19::chr10:81113959..81113978,+	p@chr10:81113959..81113978 +
Hg19::chr11:121447503..121447533,+	p9@SORL1
Hg19::chr11:121461068..121461086,+	p13@SORL1
Hg19::chr11:124932986..124933018,+	p2@SLC37A2
Hg19::chr11:46258933..46258943,+	p@chr11:46258933..46258943 +
Hg19::chr11:61447622..61447639,+	p3@DAGLA
Hg19::chr11:65150398..65150413,+	p@chr11:65150398..65150413 +
Hg19::chr11:65780490..65780495,-	p@chr11:65780490..65780495 -
Hg19::chr11:66384906..66384916,+	p3@RBM14
Hg19::chr11:70172089..70172105,+	p3@PPFIA1
Hg19::chr12:10320190..10320205,-	p2@OLR1
Hg19::chr12:10339124..10339160,+	p2@C12orf59
Hg19::chr12:125111152..125111184,+	p@chr12:125111152..125111184 +
Hg19::chr12:48298765..48298783,-	p2@VDR
Hg19::chr12:54767262..54767266,-	p@chr12:54767262..54767266 -
Hg19::chr12:54778444..54778451,-	p8@ZNF385A
Hg19::chr12:54783880..54783894,-	p@chr12:54783880..54783894 -
Hg19::chr12:6658040..6658053,-	p10@IFFO1
Hg19::chr12:6658208..6658243,-	p5@IFFO1
Hg19::chr12:6659614..6659640,-	p4@IFFO1
Hg19::chr12:6659665..6659674,-	p9@IFFO1
Hg19::chr12:96588279..96588299,+	p4@ELK3
Hg19::chr13:44453807..44453817,+	p9@LACC1
Hg19::chr13:49144437..49144448,-	p@chr13:49144437..49144448 -
Hg19::chr13:50202532..50202542,-	p@chr13:50202532..50202542 -
Hg19::chr13:50202674..50202687,+	p2@ARL11
Hg19::chr13:50216333..50216348,+	p@chr13:50216333..50216348 +
Hg19::chr13:99127804..99127827,-	p@chr13:99127804..99127827 -
Hg19::chr13:99127832..99127863,-	p@chr13:99127832..99127863 -
Hg19::chr13:99965572..99965586,+	p@chr13:99965572..99965586 +
Hg19::chr14:20943301..20943314,+	p2@AF116670
Hg19::chr14:20943365..20943376,+	p6@AF116670
Hg19::chr14:55602302..55602304,+	p@chr14:55602302..55602304 +
Hg19::chr14:64971014..64971044,+	p4@ZBTB1
Hg19::chr14:93099839..93099852,+	p@chr14:93099839..93099852 +
Hg19::chr14:93099873..93099888,+	p@chr14:93099873..93099888 +
Hg19::chr15:26029087..26029100,-	p@chr15:26029087..26029100 -
Hg19::chr15:44085373..44085402,-	p@chr15:44085373..44085402 -
Hg19::chr15:59980679..59980732,+	p1@ENST00000560199
Hg19::chr15:75354653..75354657,+	p@chr15:75354653..75354657 +
Hg19::chr15:90544013..90544051,+	p@chr15:90544013..90544051 +
Hg19::chr15:90545434..90545449,+	p9@ZNF710
Hg19::chr15:99993287..99993319,+	p@chr15:99993287..99993319 +
Hg19::chr16:30727224..30727238,+	p@chr16:30727224..30727238 +
Hg19::chr16:31370156..31370160,+	p@chr16:31370156..31370160 +
Hg19::chr16:3639462..3639501,-	p@chr16:3639462..3639501 -
Hg19::chr16:3639827..3639845,+	p@chr16:3639827..3639845 +
Hg19::chr16:67144550..67144561,-	p@chr16:67144550..67144561 -
Hg19::chr16:67144656..67144660,-	p@chr16:67144656..67144660 -
Hg19::chr17:46080045..46080056,-	p@chr17:46080045..46080056 -
Hg19::chr17:4643027..4643036,-	p10@CXCL16
Hg19::chr17:47294661..47294681,+	p@chr17:47294661..47294681 +
Hg19::chr17:4853442..4853471,+	p5@ENO3
Hg19::chr17:57870826..57870837,+	p@chr17:57870826..57870837 +
Hg19::chr17:60962303..60962306,+	p@chr17:60962303..60962306 +
Hg19::chr17:72542140..72542151,-	p5@CD300C
Hg19::chr17:72542163..72542182,-	p2@CD300C
Hg19::chr17:73291973..73291990,+	p@chr17:73291973..73291990 +
Hg19::chr17:73308280..73308291,-	p@chr17:73308280..73308291 -
Hg19::chr17:73308311..73308326,-	p@chr17:73308311..73308326 -
Hg19::chr17:74379267..74379297,+	p4@SPHK1
Hg19::chr17:78835063..78835075,-	p@chr17:78835063..78835075 -
Hg19::chr17:78866856..78866873,+	p@chr17:78866856..78866873 +
Hg19::chr17:78866874..78866904,+	p@chr17:78866874..78866904 +
Hg19::chr17:78866905..78866920,+	p@chr17:78866905..78866920 +
Hg19::chr17:8124665..8124678,+	p@chr17:8124665..8124678 +
Hg19::chr18:3449695..3449712,+	p9@TGIF1
Hg19::chr18:3449720..3449749,+	p2@TGIF1
Hg19::chr18:3449821..3449860,+	p7@TGIF1
Hg19::chr19:11679245..11679256,-	p@chr19:11679245..11679256 -
Hg19::chr19:11689066..11689084,-	p@chr19:11689066..11689084 -
Hg19::chr19:11689256..11689267,+	p@chr19:11689256..11689267 +
Hg19::chr19:11689281..11689296,+	p@chr19:11689281..11689296 +
Hg19::chr19:11689297..11689311,+	p@chr19:11689297..11689311 +
Hg19::chr19:11689518..11689533,-	p9@ACP5
Hg19::chr19:11689547..11689564,-	p6@ACP5
Hg19::chr19:11689913..11689921,+	p@chr19:11689913..11689921 +
Hg19::chr19:11691549..11691554,-	p@chr19:11691549..11691554 -
Hg19::chr19:12992190..12992203,-	p4@DNASE2
Hg19::chr19:18284995..18285015,+	p10@IFI30
Hg19::chr19:18288914..18288931,-	p5@CU676849 p5@CU689079
Hg19::chr19:18291934..18291937,+	p@chr19:18291934..18291937 +
Hg19::chr19:19051112..19051142,+	p@chr19:19051112..19051142 +
Hg19::chr19:19064914..19064929,+	p@chr19:19064914..19064929 +
Hg19::chr19:19496539..19496576,+	p8@GATAD2A
Hg19::chr19:2271164..2271208,+	p4@AF090094
Hg19::chr19:3136024..3136039,+	p3@GNA15
Hg19::chr19:45240026..45240036,-	p@chr19:45240026..45240036 -
Hg19::chr19:45245470..45245482,+	p@chr19:45245470..45245482 +
Hg19::chr19:4553755..4553765,+	p@chr19:4553755..4553765 +
Hg19::chr19:4553881..4553890,-	p@chr19:4553881..4553890 -
Hg19::chr19:4553899..4553936,-	p@chr19:4553899..4553936 -
Hg19::chr19:4553941..4554035,-	p@chr19:4553941..4554035 -
Hg19::chr19:4554074..4554110,-	p@chr19:4554074..4554110 -
Hg19::chr19:4554122..4554133,-	p@chr19:4554122..4554133 -
Hg19::chr19:4554139..4554153,-	p@chr19:4554139..4554153 -
Hg19::chr19:4554178..4554199,-	p@chr19:4554178..4554199 -
Hg19::chr19:4554207..4554225,-	p@chr19:4554207..4554225 -
Hg19::chr19:4554233..4554246,-	p@chr19:4554233..4554246 -
Hg19::chr19:4554304..4554315,-	p@chr19:4554304..4554315 -
Hg19::chr19:4554391..4554403,-	p@chr19:4554391..4554403 -
Hg19::chr19:4555517..4555543,-	p@chr19:4555517..4555543 -
Hg19::chr19:4557208..4557239,-	p@chr19:4557208..4557239 -
Hg19::chr19:4559572..4559583,-	p5@SEMA6B
Hg19::chr19:4559599..4559619,-	p4@SEMA6B
Hg19::chr19:4559675..4559715,-	p2@SEMA6B
Hg19::chr19:4559720..4559799,-	p1@SEMA6B
Hg19::chr19:4559814..4559830,-	p3@SEMA6B
Hg19::chr19:49377984..49378040,+	p@chr19:49377984..49378040 +
Hg19::chr19:49465701..49465715,-	p@chr19:49465701..49465715 -
Hg19::chr19:49469369..49469381,+	p@chr19:49469369..49469381 +
Hg19::chr19:49469813..49469830,+	p@chr19:49469813..49469830 +
Hg19::chr19:50432132..50432217,+	p2@ATF5
Hg19::chr19:51631339..51631373,+	p@chr19:51631339..51631373 +
Hg19::chr19:52264268..52264290,+	p3@FPR2
Hg19::chr19:52307414..52307433,-	p@chr19:52307414..52307433 -
Hg19::chr19:55385646..55385657,+	p3@FCAR
Hg19::chr19:7556002..7556030,-	p@chr19:7556002..7556030 -
Hg19::chr1:108592945..108592955,+	p@chr1:108592945..108592955 +
Hg19::chr1:108593061..108593077,+	p@chr1:108593061..108593077 +
Hg19::chr1:108593091..108593109,+	p@chr1:108593091..108593109 +
Hg19::chr1:12252525..12252539,+	p@chr1:12252525..12252539 +
Hg19::chr1:149901972..149901989,-	p@chr1:149901972..149901989 -
Hg19::chr1:154422387..154422390,+	p@chr1:154422387..154422390 +
Hg19::chr1:15479643..15479666,+	p5@TMEM51
Hg19::chr1:155869427..155869441,-	p@chr1:155869427..155869441 -
Hg19::chr1:181013908..181013945,+	p@chr1:181013908..181013945 +
Hg19::chr1:212687665..212687673,+	p@chr1:212687665..212687673 +
Hg19::chr1:244512513..244512546,+	p@chr1:244512513..244512546 +
Hg19::chr1:244615163..244615196,-	p2@ADSS
Hg19::chr1:25281902..25281921,+	p@chr1:25281902..25281921 +
Hg19::chr1:25360722..25360754,+	p@chr1:25360722..25360754 +
Hg19::chr1:25360757..25360774,+	p@chr1:25360757..25360774 +
Hg19::chr1:25360780..25360795,+	p@chr1:25360780..25360795 +
Hg19::chr1:25425897..25425914,-	p@chr1:25425897..25425914 -
Hg19::chr1:27939332..27939345,-	p@chr1:27939332..27939345 -
Hg19::chr1:45277688..45277721,+	p@chr1:45277688..45277721 +
Hg19::chr20:2295693..2295700,-	p@chr20:2295693..2295700 -
Hg19::chr20:25289627..25289655,-	p@chr20:25289627..25289655 -
Hg19::chr20:48807648..48807671,+	p9@CEBPB
Hg19::chr20:48876519..48876531,-	p@chr20:48876519..48876531 -
Hg19::chr20:48909224..48909237,-	p@chr20:48909224..48909237 -
Hg19::chr20:5054058..5054064,-	p@chr20:5054058..5054064 -
Hg19::chr20:5070979..5071001,-	p@chr20:5070979..5071001 -
Hg19::chr20:61192950..61192968,+	p@chr20:61192950..61192968 +
Hg19::chr20:632324..632328,-	p@chr20:632324..632328 -
Hg19::chr21:30565627..30565638,+	p4@LINC00189
Hg19::chr21:30565654..30565682,+	p2@LINC00189
Hg19::chr21:36259830..36259842,-	p30@RUNX1
Hg19::chr22:35719490..35719507,+	p5@TOM1
Hg19::chr22:35785133..35785148,+	p@chr22:35785133..35785148 +
Hg19::chr22:46998103..46998127,-	p@chr22:46998103..46998127 -
Hg19::chr2:119731876..119731935,+	p@chr2:119731876..119731935 +
Hg19::chr2:158732905..158732920,-	p@chr2:158732905..158732920 -
Hg19::chr2:169907514..169907530,+	p@chr2:169907514..169907530 +
Hg19::chr2:169907540..169907551,+	p@chr2:169907540..169907551 +
Hg19::chr2:169926127..169926143,+	p2@DHRS9
Hg19::chr2:169926149..169926160,+	p4@DHRS9
Hg19::chr2:198002072..198002083,-	p@chr2:198002072..198002083 -
Hg19::chr2:218766698..218766769,-	p5@TNS1
Hg19::chr2:219246728..219246739,+	p6@SLC11A1
Hg19::chr2:219246746..219246759,+	p5@SLC11A1
Hg19::chr2:219248811..219248852,+	p8@SLC11A1
Hg19::chr2:219613974..219613992,+	p@chr2:219613974..219613992 +
Hg19::chr2:230058497..230058500,-	p@chr2:230058497..230058500 -
Hg19::chr2:230200207..230200230,+	p@chr2:230200207..230200230 +
Hg19::chr2:241564655..241564668,+	p3@GPR35
Hg19::chr2:241564889..241564932,+	p1@GPR35
Hg19::chr2:241564946..241564955,+	p5@GPR35
Hg19::chr2:58273760..58273846,+	p2@VRK2
Hg19::chr2:58273887..58273898,+	p5@VRK2
Hg19::chr2:58274320..58274344,+	p@chr2:58274320..58274344 +
Hg19::chr2:58378901..58378906,+	p@chr2:58378901..58378906 +
Hg19::chr2:91960539..91960551,+	p@chr2:91960539..91960551 +
Hg19::chr2:91960553..91960566,+	p@chr2:91960553..91960566 +
Hg19::chr3:192635973..192635996,-	p2@MB21D2
Hg19::chr3:196065277..196065288,-	p5@TM4SF19
Hg19::chr3:196065302..196065322,-	p2@TM4SF19
Hg19::chr3:196065414..196065425,-	p3@TM4SF19
Hg19::chr3:48603225..48603242,-	p8@COL7A1
Hg19::chr3:48603660..48603676,-	p@chr3:48603660..48603676 -
Hg19::chr3:52529994..52530017,+	p@chr3:52529994..52530017 +
Hg19::chr3:98501953..98501955,+	p7@ST3GAL6
Hg19::chr4:159092769..159092780,-	p12@FAM198B
Hg19::chr4:185314233..185314269,-	p@chr4:185314233..185314269 -
Hg19::chr4:2418461..2418476,+	p@chr4:2418461..2418476 +
Hg19::chr4:2796691..2796709,+	p@chr4:2796691..2796709 +
Hg19::chr4:2826871..2826888,+	p11@SH3BP2
Hg19::chr4:681242..681274,+	p@chr4:681242..681274 +
Hg19::chr4:84255980..84256009,-	p1@HPSE
Hg19::chr5:131279764..131279771,-	p@chr5:131279764..131279771 -
Hg19::chr5:135382258..135382274,+	p29@TGFBI
Hg19::chr5:135382287..135382307,+	p24@TGFBI
Hg19::chr5:135402548..135402562,+	p@chr5:135402548..135402562 +
Hg19::chr5:156534012..156534066,-	p10@HAVCR2
Hg19::chr5:169697858..169697883,-	p@chr5:169697858..169697883 -
Hg19::chr5:177820148..177820162,-	p@chr5:177820148..177820162 -
Hg19::chr5:180221221..180221227,-	p@chr5:180221221..180221227 -
Hg19::chr5:180242534..180242560,-	p7@MGAT1
Hg19::chr5:180245123..180245153,+	p@chr5:180245123..180245153 +
Hg19::chr5:180258559..180258573,-	p2@uc003mmj.1
Hg19::chr5:77805957..77805964,-	p13@LHFPL2
Hg19::chr5:77806048..77806055,-	p17@LHFPL2
Hg19::chr5:77806142..77806156,-	p8@LHFPL2
Hg19::chr5:77806166..77806224,-	p2@LHFPL2
Hg19::chr5:95158644..95158657,-	p3@GLRX
Hg19::chr6:106535656..106535682,+	p10@PRDM1
Hg19::chr6:106535687..106535706,+	p8@PRDM1
Hg19::chr6:106535874..106535878,+	p12@PRDM1
Hg19::chr6:106547367..106547394,+	p@chr6:106547367..106547394 +
Hg19::chr6:106552921..106552933,+	p@chr6:106552921..106552933 +
Hg19::chr6:116761121..116761127,+	p@chr6:116761121..116761127 +
Hg19::chr6:15533961..15533988,-	p8@DTNBP1
Hg19::chr6:15534018..15534039,-	p7@DTNBP1
Hg19::chr6:166671395..166671415,-	p@chr6:166671395..166671415 -
Hg19::chr6:29932741..29932763,-	p@chr6:29932741..29932763 -
Hg19::chr6:6713323..6713329,-	p@chr6:6713323..6713329 -
Hg19::chr7:141363135..141363146,+	p@chr7:141363135..141363146 +
Hg19::chr7:151330150..151330157,-	p29@PRKAG2
Hg19::chr7:151330169..151330179,-	p20@PRKAG2
Hg19::chr7:151330181..151330212,-	p3@PRKAG2
Hg19::chr7:151330218..151330259,-	p6@PRKAG2
Hg19::chr7:151433703..151433708,+	p@chr7:151433703..151433708 +
Hg19::chr7:2832799..2832806,+	p@chr7:2832799..2832806 +
Hg19::chr7:39720934..39720937,+	p@chr7:39720934..39720937 +
Hg19::chr9:115950834..115950848,-	p6@FKBP15
Hg19::chr9:132101645..132101659,+	p@chr9:132101645..132101659 +
Hg19::chr9:132106032..132106042,-	p@chr9:132106032..132106042 -
Hg19::chr9:134530818..134530849,-	p@chr9:134530818..134530849 -
Hg19::chr9:137264942..137264963,+	p@chr9:137264942..137264963 +
Hg19::chr9:137264970..137264982,+	p@chr9:137264970..137264982 +
Hg19::chrX:150565253..150565267,+	p3@VMA21
Hg19::chrX:153286067..153286101,-	p@chrX:153286067..153286101 -
Hg19::chrX:47436888..47436926,-	p@chrX:47436888..47436926 -

Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

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No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

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GO ID	GO name	FDR corrected p-value
GO:0044464	cell part	0.0110169370410131
GO:0006357	regulation of transcription from RNA polymerase II promoter	0.0110169370410131
GO:0006366	transcription from RNA polymerase II promoter	0.0110169370410131
GO:0048523	negative regulation of cellular process	0.0110169370410131
GO:0048519	negative regulation of biological process	0.0110169370410131
GO:0016481	negative regulation of transcription	0.0110169370410131
GO:0030228	lipoprotein receptor activity	0.0110169370410131
GO:0005041	low-density lipoprotein receptor activity	0.0110169370410131
GO:0045934	negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	0.0110169370410131
GO:0045766	positive regulation of angiogenesis	0.0110169370410131
GO:0009887	organ morphogenesis	0.0157805697684688
GO:0005764	lysosome	0.0157805697684688
GO:0000323	lytic vacuole	0.0157805697684688
GO:0030169	low-density lipoprotein binding	0.0157805697684688
GO:0031324	negative regulation of cellular metabolic process	0.0157805697684688
GO:0016564	transcription repressor activity	0.0160788228917869
GO:0030674	protein binding, bridging	0.0167097573713658
GO:0005773	vacuole	0.0196882745563289
GO:0009892	negative regulation of metabolic process	0.0227931743814195
GO:0003714	transcription corepressor activity	0.0227931743814195
GO:0016021	integral to membrane	0.0242153939333534
GO:0031224	intrinsic to membrane	0.025159992169453
GO:0044425	membrane part	0.0265856287196721
GO:0008034	lipoprotein binding	0.0277528664170359
GO:0044262	cellular carbohydrate metabolic process	0.0301222065828673
GO:0001525	angiogenesis	0.0301222065828673
GO:0003712	transcription cofactor activity	0.0308865182260587
GO:0006167	AMP biosynthetic process	0.0308865182260587
GO:0016656	monodehydroascorbate reductase (NADH) activity	0.0308865182260587
GO:0030852	regulation of granulocyte differentiation	0.0308865182260587
GO:0030854	positive regulation of granulocyte differentiation	0.0308865182260587
GO:0005590	collagen type VII	0.0308865182260587
GO:0008434	vitamin D3 receptor activity	0.0308865182260587
GO:0005737	cytoplasm	0.0308865182260587
GO:0005515	protein binding	0.0308865182260587
GO:0048514	blood vessel morphogenesis	0.0308865182260587
GO:0045765	regulation of angiogenesis	0.0308865182260587
GO:0048646	anatomical structure formation	0.0335991407795975
GO:0006898	receptor-mediated endocytosis	0.0340752893108384
GO:0001568	blood vessel development	0.0378963848122442
GO:0001944	vasculature development	0.0378963848122442
GO:0003700	transcription factor activity	0.0378963848122442
GO:0006916	anti-apoptosis	0.0378963848122442
GO:0043565	sequence-specific DNA binding	0.0378963848122442
GO:0016020	membrane	0.0378963848122442
GO:0006670	sphingosine metabolic process	0.0378963848122442
GO:0032422	purine-rich negative regulatory element binding	0.0378963848122442
GO:0016889	endodeoxyribonuclease activity, producing 3'-phosphomonoesters	0.0378963848122442
GO:0046033	AMP metabolic process	0.0378963848122442
GO:0004531	deoxyribonuclease II activity	0.0378963848122442
GO:0008481	sphinganine kinase activity	0.0378963848122442
GO:0035238	vitamin A biosynthetic process	0.0378963848122442
GO:0042362	fat-soluble vitamin biosynthetic process	0.0378963848122442
GO:0019862	IgA binding	0.0378963848122442
GO:0042905	9-cis-retinoic acid metabolic process	0.0378963848122442
GO:0042904	9-cis-retinoic acid biosynthetic process	0.0378963848122442
GO:0047035	3-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity	0.0378963848122442
GO:0009605	response to external stimulus	0.0386290112645299
GO:0006629	lipid metabolic process	0.0427264398054781
GO:0010324	membrane invagination	0.0427264398054781
GO:0006897	endocytosis	0.0427264398054781
GO:0045892	negative regulation of transcription, DNA-dependent	0.045600196476447
GO:0005624	membrane fraction	0.045600196476447
GO:0005667	transcription factor complex	0.045600196476447
GO:0009611	response to wounding	0.045600196476447
GO:0015038	glutathione disulfide oxidoreductase activity	0.045600196476447
GO:0017050	D-erythro-sphingosine kinase activity	0.045600196476447
GO:0004566	beta-glucuronidase activity	0.045600196476447
GO:0004019	adenylosuccinate synthase activity	0.045600196476447
GO:0007207	muscarinic acetylcholine receptor, phospholipase C activating pathway	0.045600196476447
GO:0015037	peptide disulfide oxidoreductase activity	0.045600196476447
GO:0006355	regulation of transcription, DNA-dependent	0.0460205566465812
GO:0008134	transcription factor binding	0.0460205566465812
GO:0008202	steroid metabolic process	0.0484657614488581
GO:0006066	alcohol metabolic process	0.0484657614488581
GO:0044424	intracellular part	0.0484657614488581
GO:0000287	magnesium ion binding	0.0484657614488581
GO:0043066	negative regulation of apoptosis	0.0484657614488581
GO:0044451	nucleoplasm part	0.0484657614488581
GO:0043069	negative regulation of programmed cell death	0.0484657614488581
GO:0009653	anatomical structure morphogenesis	0.0484657614488581
GO:0048247	lymphocyte chemotaxis	0.0484657614488581
GO:0001892	embryonic placenta development	0.0484657614488581
GO:0031958	corticosteroid receptor signaling pathway	0.0484657614488581
GO:0009249	protein lipoylation	0.0484657614488581
GO:0042448	progesterone metabolic process	0.0484657614488581
GO:0030851	granulocyte differentiation	0.0484657614488581
GO:0045987	positive regulation of smooth muscle contraction	0.0484657614488581
GO:0042921	glucocorticoid receptor signaling pathway	0.0484657614488581
GO:0006351	transcription, DNA-dependent	0.0486981554268126
GO:0032774	RNA biosynthetic process	0.0489477032778742

Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>

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Cell Type

Ontology term	p-value	n
defensive cell	9.47e-123	48
phagocyte	9.47e-123	48
classical monocyte	2.32e-116	42
CD14-positive, CD16-negative classical monocyte	2.32e-116	42
macrophage dendritic cell progenitor	4.24e-111	61
monopoietic cell	3.38e-110	59
monocyte	3.38e-110	59
monoblast	3.38e-110	59
promonocyte	3.38e-110	59
myeloid leukocyte	2.27e-101	72
granulocyte monocyte progenitor cell	2.68e-100	67
myeloid lineage restricted progenitor cell	1.63e-97	66
myeloid cell	5.88e-67	108
common myeloid progenitor	5.88e-67	108
stuff accumulating cell	7.02e-63	87
nongranular leukocyte	2.50e-59	115
leukocyte	4.88e-58	136
hematopoietic lineage restricted progenitor cell	2.14e-51	120
hematopoietic stem cell	8.96e-45	168
angioblastic mesenchymal cell	8.96e-45	168
hematopoietic cell	6.68e-42	177
hematopoietic oligopotent progenitor cell	3.24e-41	161
hematopoietic multipotent progenitor cell	3.24e-41	161
mesenchymal cell	5.56e-15	354
connective tissue cell	1.85e-14	361
motile cell	1.29e-12	386
intermediate monocyte	2.58e-12	9
CD14-positive, CD16-positive monocyte	2.58e-12	9
basophil	1.85e-10	3
multi fate stem cell	2.29e-10	427
single nucleate cell	4.58e-10	3
mononuclear cell	4.58e-10	3
somatic stem cell	4.66e-10	433
stem cell	1.17e-09	441
macrophage	9.76e-09	6

Uber Anatomy

Ontology term	p-value	n
bone marrow	2.99e-87	76
hematopoietic system	4.74e-81	98
blood island	4.74e-81	98
bone element	4.00e-80	82
immune system	1.08e-75	93
hemolymphoid system	1.58e-72	108
skeletal element	4.40e-72	90
skeletal system	8.02e-64	100
musculoskeletal system	7.73e-34	167
lateral plate mesoderm	3.35e-33	203
mesoderm	3.72e-18	315
mesoderm-derived structure	3.72e-18	315
presumptive mesoderm	3.72e-18	315
connective tissue	1.44e-14	371

Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

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Novel motifs

JASPAR motifs

Motifs	-log10(p-value)
{{{tfbs_overrepresentation_jaspar}}}

ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

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(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)

TF	#promoters	Enrichment	p-value	q-value
EBF1#1879	48	1.53780722530688	0.00171907630759913	0.0106601716238776
ESR1#2099	19	2.1028901533343	0.00209549742213237	0.012120716397324
FOS#2353	57	1.84490450578051	3.92048656211706e-06	0.000127555045501852
FOSL1#8061	22	3.14280127251873	2.94797947448122e-06	0.000101011820319995
FOSL2#2355	27	1.64430005871642	0.00813652341302652	0.0321322834732314
JUN#3725	40	1.800407078034	0.000226326205530778	0.00249733571890427
JUND#3727	56	1.40899705303877	0.00474977054067265	0.0223259951166709
MAFK#7975	22	2.14466233464841	0.000740759571979537	0.00583484342242785
MAX#4149	65	1.50869103627864	0.000373222409626671	0.0037101632628022
NFE2#4778	10	2.77713167811615	0.00373730794175249	0.0186248367671274
SPI1#6688	69	2.03632489959737	5.5508121718546e-09	4.42535322455208e-07

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

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